BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A23
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112042-1|AAI12043.1| 597|Homo sapiens WD repeats and SOF1 dom... 31 4.1
BC101810-1|AAI01811.1| 597|Homo sapiens WD repeats and SOF1 dom... 31 4.1
AK074725-1|BAC11163.1| 597|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK027799-1|BAB55377.1| 597|Homo sapiens protein ( Homo sapiens ... 31 4.1
X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1 p... 31 5.5
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 31 5.5
BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein. 31 5.5
BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein. 31 5.5
BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein. 31 5.5
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 31 7.2
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 31 7.2
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 31 7.2
AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protei... 31 7.2
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 31 7.2
AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein. 31 7.2
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 31 7.2
BC047528-1|AAH47528.1| 329|Homo sapiens TOMM40 protein protein. 30 9.6
BC017224-1|AAH17224.1| 361|Homo sapiens TOMM40 protein protein. 30 9.6
BC012134-1|AAH12134.1| 361|Homo sapiens translocase of outer mi... 30 9.6
BC006413-1|AAH06413.1| 361|Homo sapiens translocase of outer mi... 30 9.6
BC001779-1|AAH01779.1| 361|Homo sapiens TOMM40 protein protein. 30 9.6
AF316402-1|AAL46627.1| 361|Homo sapiens haymaker protein protein. 30 9.6
AF050154-2|AAD02504.1| 361|Homo sapiens D19S1177E protein. 30 9.6
AF043253-1|AAC82343.1| 361|Homo sapiens mitochondrial outer mem... 30 9.6
AF043250-1|AAC82342.1| 361|Homo sapiens mitochondrial outer mem... 30 9.6
>BC112042-1|AAI12043.1| 597|Homo sapiens WD repeats and SOF1 domain
containing protein.
Length = 597
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 672 PPPXXXGPLXPLTPPXGXXRGXLLP 746
PPP PL TPP G RG L P
Sbjct: 4 PPPWRRSPLVSATPPPGPTRGLLCP 28
>BC101810-1|AAI01811.1| 597|Homo sapiens WD repeats and SOF1 domain
containing protein.
Length = 597
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 672 PPPXXXGPLXPLTPPXGXXRGXLLP 746
PPP PL TPP G RG L P
Sbjct: 4 PPPWRRSPLVSATPPPGPTRGLLCP 28
>AK074725-1|BAC11163.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90244 fis, clone NT2RM2001738, weakly similar to
SOF1 PROTEIN. ).
Length = 597
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 672 PPPXXXGPLXPLTPPXGXXRGXLLP 746
PPP PL TPP G RG L P
Sbjct: 4 PPPWRRSPLVSATPPPGPTRGLLCP 28
>AK027799-1|BAB55377.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ14893 fis, clone PLACE1004302, weakly similar to
SOF1 PROTEIN. ).
Length = 597
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 672 PPPXXXGPLXPLTPPXGXXRGXLLP 746
PPP PL TPP G RG L P
Sbjct: 4 PPPWRRSPLVSATPPPGPTRGLLCP 28
>X07881-1|CAA30728.1| 309|Homo sapiens proline-rich protein G1
protein.
Length = 309
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 663 PGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
P PPP P PL PP G +G PP
Sbjct: 266 PQGPPPPGGNPQQPLPPPAGKPQGPPPPP 294
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 663 PGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
P PPP P PL PP G +G PP
Sbjct: 119 PQGPPPPGGNPQQPLPPPAGKPQGPPPPP 147
>BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 663 PGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
P PPP P PL PP G +G PP
Sbjct: 266 PQGPPPPGGNPQQPLPPPAGKPQGPPPPP 294
>BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 663 PGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
P PPP P PL PP G +G PP
Sbjct: 266 PQGPPPPGGNPQQPLPPPAGKPQGPPPPP 294
>BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 663 PGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
P PPP P PL PP G +G PP
Sbjct: 266 PQGPPPPGGNPQQPLPPPAGKPQGPPPPP 294
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 657 AXPGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
A PG PPP PL PP G L PP
Sbjct: 495 APPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 657 AXPGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
A PG PPP PL PP G L PP
Sbjct: 254 APPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 284
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 657 AXPGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
A PG PPP PL PP G L PP
Sbjct: 495 APPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protein 1
protein.
Length = 1431
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 663 PGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
P PPP L PL PP G R PP+
Sbjct: 1197 PAEPPPTDLAHLPPLPPPEGEARKPAKPPV 1226
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 657 AXPGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
A PG PPP PL PP G L PP
Sbjct: 495 APPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein.
Length = 1154
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 663 PGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
P PPP L PL PP G R PP+
Sbjct: 920 PAEPPPTDLAHLPPLPPPEGEARKPAKPPV 949
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 657 AXPGXPPPXXXGPLXPLTPPXGXXRGXLLPP 749
A PG PPP PL PP G L PP
Sbjct: 495 APPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>BC047528-1|AAH47528.1| 329|Homo sapiens TOMM40 protein protein.
Length = 329
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>BC017224-1|AAH17224.1| 361|Homo sapiens TOMM40 protein protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>BC012134-1|AAH12134.1| 361|Homo sapiens translocase of outer
mitochondrial membrane 40 homolog (yeast) protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>BC006413-1|AAH06413.1| 361|Homo sapiens translocase of outer
mitochondrial membrane 40 homolog (yeast) protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>BC001779-1|AAH01779.1| 361|Homo sapiens TOMM40 protein protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>AF316402-1|AAL46627.1| 361|Homo sapiens haymaker protein protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>AF050154-2|AAD02504.1| 361|Homo sapiens D19S1177E protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>AF043253-1|AAC82343.1| 361|Homo sapiens mitochondrial outer
membrane protein protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
>AF043250-1|AAC82342.1| 361|Homo sapiens mitochondrial outer
membrane protein protein.
Length = 361
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 639 NXLGQXAXPGXPPPXXXGPLXPLTPPXGXXRGXLLPPL 752
N L + P PPP L L PP G LPPL
Sbjct: 3 NVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPL 40
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,668,110
Number of Sequences: 237096
Number of extensions: 1150383
Number of successful extensions: 4060
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3874
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -