Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_A20
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical
           protein F52B11.4 protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
 Frame = -3

Query: 702 GXXAKDLGKXGKVPGGKCSKNSXPGXAPPAQXXXXPG-PVVTRGARAPGXP 553
           G    D G  G   GG CS    PG A PA     PG P     A  PG P
Sbjct: 85  GDEGVDQGSEG-AQGGSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNP 134


>Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical
           protein F15A2.1 protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = -3

Query: 663 PGGKCSKNSXPGXAPPAQXXXXPGPVVTRGARAPGXPR 550
           P G   +   PG A PA      GPV   G   P  PR
Sbjct: 171 PNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAGPAGPR 208


>Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.6 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = -3

Query: 693 AKDLGKXGKVPGGKCSKNSXPGXAPPAQXXXXPG-PVVTRGARAPGXP 553
           A + G  G   GG CS    PG A PA     PG P     A  PG P
Sbjct: 88  AVETGNTGS-QGGSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNP 134


>Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.5 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = -3

Query: 693 AKDLGKXGKVPGGKCSKNSXPGXAPPAQXXXXPG-PVVTRGARAPGXP 553
           A + G  G   GG CS    PG A PA     PG P     A  PG P
Sbjct: 88  AVETGNTGS-QGGSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNP 134


>Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.1 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = -3

Query: 693 AKDLGKXGKVPGGKCSKNSXPGXAPPAQXXXXPG-PVVTRGARAPGXP 553
           A + G  G   GG CS    PG A PA     PG P     A  PG P
Sbjct: 88  AVETGNTGS-QGGSCSGCCLPGAAGPAGTPGKPGRPGRPGAAGLPGNP 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,102,683
Number of Sequences: 27780
Number of extensions: 169587
Number of successful extensions: 387
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)