Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A19
(785 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0515 - 4490855-4490902,4490992-4491072,4491752-4491823,449... 138 3e-33
01_05_0816 + 25462571-25462630,25462752-25462838,25462929-254629... 89 3e-18
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905... 71 8e-13
01_05_0818 + 25468257-25468271,25468504-25468575,25469647-254697... 53 2e-07
07_03_1093 + 23912303-23912467,23912671-23912801,23913079-239130... 42 6e-04
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 40 0.003
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 35 0.064
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 35 0.064
01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738,842... 32 0.45
03_05_0723 - 27143559-27143648,27144020-27144192,27144284-271443... 32 0.59
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 31 1.4
05_01_0579 - 5196888-5196970,5197063-5197621,5197704-5197786,519... 30 1.8
02_04_0277 - 21494616-21494747,21494830-21494916,21495025-214951... 30 1.8
08_01_0555 - 4871996-4872652 30 2.4
08_02_0632 + 19515234-19515374,19515489-19515656,19518907-195189... 29 3.2
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209... 29 5.5
11_01_0488 + 3770410-3770774,3771197-3771284,3771383-3771466,377... 28 7.3
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 28 7.3
08_02_0130 - 12900202-12900277,12901457-12901536,12901654-129017... 28 9.7
08_01_0595 + 5250093-5250219,5251579-5251624,5252732-5252825 28 9.7
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 9.7
05_03_0370 + 13144612-13144639,13144749-13145260,13146995-131473... 28 9.7
>08_01_0515 -
4490855-4490902,4490992-4491072,4491752-4491823,
4492296-4492373,4493316-4493444,4493862-4493942,
4494064-4494205,4494672-4494865,4494962-4495027,
4495108-4495194,4495326-4495376
Length = 342
Score = 138 bits (335), Expect = 3e-33
Identities = 66/137 (48%), Positives = 89/137 (64%), Gaps = 2/137 (1%)
Frame = -1
Query: 590 GFALGSVEGRVAIQYVNPTNPKDNFTFKCHRTTGAVGGYQDIYAVNDIAFHPVHGTLATV 411
GF +GS+EGRV + +++ + NFTFKCHR DI++VN + FHPVH T AT
Sbjct: 205 GFLVGSIEGRVGVHHIDDSQQSKNFTFKCHREGN------DIFSVNSLNFHPVHHTFATA 258
Query: 410 GSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEHYNP-NKK 234
GSDG+F+FWDKD++ +LK+ + FN G IFAYAV YDWS+G E++NP K
Sbjct: 259 GSDGAFNFWDKDSKQRLKAFSRCPLPIPCSTFNSDGSIFAYAVCYDWSRGAENHNPATAK 318
Query: 233 TFIYLRASYE-ELKARP 186
T IYL + E E+K +P
Sbjct: 319 TSIYLHSPQESEVKGKP 335
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = -3
Query: 777 LTXRAYXAXVEYPMAVVGTAXXGIXMXTLEGKPAEFKRIESPXKHQHRCVSIFQGQE 607
L R Y V YP+ +VGTA + + L+ EFKRI+SP K+Q RC++ F Q+
Sbjct: 148 LPERCYALTVNYPLMIVGTADRNLVVFNLQNPQTEFKRIQSPLKYQTRCLAAFPDQQ 204
>01_05_0816 +
25462571-25462630,25462752-25462838,25462929-25462961,
25462962-25463030,25463146-25463339,25463632-25463773,
25464126-25464165,25464428-25464594,25465114-25465116,
25465371-25465499,25465811-25465888,25465974-25465979
Length = 335
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = -1
Query: 581 LGSVEGRVAIQYVNPTNPKDNFTFKCHRTTGAVGGYQDIYAVNDIAFHPVHGTLATVGSD 402
+GS+EGRV + +V+ NFTFKCHR DIYAVN + FHPVH T AT GSD
Sbjct: 266 VGSIEGRVGVHHVDDGQQGKNFTFKCHRDGN------DIYAVNALNFHPVHHTFATSGSD 319
Query: 401 GSFSFWDKDARTKLKS 354
G F+FWDKD++ +LK+
Sbjct: 320 GGFNFWDKDSKQRLKT 335
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3
Query: 678 AEFKRIESPXKHQHRCVSIFQGQE 607
AEFKRI SP K Q RC++ F Q+
Sbjct: 238 AEFKRIVSPLKLQTRCLAAFPDQQ 261
>03_04_0228 -
18989688-18989807,18990300-18990345,18990452-18990552,
18990624-18990702,18990788-18990868,18991440-18991502,
18994171-18994246,18994980-18995246,18995994-18996076,
18996792-18996922,18997043-18997174
Length = 392
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/93 (35%), Positives = 50/93 (53%)
Frame = -1
Query: 518 FTFKCHRTTGAVGGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLD 339
+ FKCHR + A G +Y VN IAFHP++GT AT G DG + WD + +L
Sbjct: 252 YAFKCHRKSEA--GRDTVYPVNAIAFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYA 309
Query: 338 QSLTKCAFNHSGQIFAYAVGYDWSKGHEHYNPN 240
S+ +F+ G + A A Y + +G + + P+
Sbjct: 310 SSIAALSFSKDGHLLAVASSYTYEEGEKSHEPD 342
>01_05_0818 +
25468257-25468271,25468504-25468575,25469647-25469727,
25470008-25470049
Length = 69
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -1
Query: 332 LTKCAFNHSGQIFAYAVGYDWSKGHEHYNPN-KKTFIYLRASYE-ELKARP 186
+T FN G IFAYAV YDWSKG E +NP+ KT I+L + E E+K +P
Sbjct: 14 ITCSTFNQDGSIFAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESEVKGKP 64
>07_03_1093 +
23912303-23912467,23912671-23912801,23913079-23913087,
23913146-23913228,23914494-23914596,23915988-23916066,
23916174-23916274,23916371-23916479
Length = 259
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -1
Query: 431 HGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEH 252
HGT AT G D + WD R KL S+ +F+ G++ A A Y + +G
Sbjct: 165 HGTFATGGCDRFVNLWDGANRRKLFQFPRYPSSIAALSFSRDGRLLAVASSYTYEEGDIP 224
Query: 251 YNPNKKTFIYLRASYE-ELKARP 186
+ P+ I++R E ++K RP
Sbjct: 225 HPPDA---IFIRDVNEVQVKPRP 244
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 425 TLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEHYN 246
T T ++G WD ++ KL + S+ AFNH+GQIFA A ++ + + N
Sbjct: 1225 TFVTGDNEGYVIAWDAQSKKKLHEFPIYSGSVASIAFNHNGQIFAVASNSNYQESDKICN 1284
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 35.1 bits (77), Expect = 0.064
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 452 DIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYA 285
D+AF PV LAT +D + W D L LD+ L + AF+ SG A A
Sbjct: 278 DVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDR-LARLAFHPSGGYLATA 332
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 449 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFA 291
+AFHP G LAT D ++ WD +L E +S+ +F+ G + A
Sbjct: 320 LAFHPSGGYLATASFDKTWRLWDVSTGKELLLQEGHSRSVYGVSFHPDGSLAA 372
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 35.1 bits (77), Expect = 0.064
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 452 DIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYA 285
D+AF PV LAT +D + W D L LD+ L + AF+ SG A A
Sbjct: 278 DVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDR-LARLAFHPSGGYLATA 332
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 449 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFA 291
+AFHP G LAT D ++ WD +L E +S+ +F+ G + A
Sbjct: 320 LAFHPSGGYLATASFDKTWRLWDVSTGKELLLQEGHSRSVYGVSFHPDGSLAA 372
>01_01_1069 -
8420454-8420670,8421272-8421447,8421556-8421738,
8421885-8421980,8422064-8422192,8422266-8422445,
8422524-8422634,8422714-8422869,8422983-8423078,
8423160-8423327,8423402-8423642,8423724-8423851,
8424042-8424134,8424214-8424309,8424431-8424523,
8424741-8424850,8424999-8425134,8425215-8425315,
8426029-8426152,8426237-8426411,8426523-8426681,
8427423-8427536,8427669-8427848,8428926-8429005
Length = 1113
Score = 32.3 bits (70), Expect = 0.45
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -1
Query: 458 VNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLD--QSLTKCAFNHSGQIFA 291
V + F + G D FWD D T L STE L + FN G + A
Sbjct: 568 VGVVQFDTAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGGLPGLPRLRFNKEGNLLA 625
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -1
Query: 461 AVNDIAFHPVHGTLATVGS-DGSFSFWDKDARTKLKSTELLDQSLTKCA--FNHSGQIFA 291
+V + FHP TL VGS +G + W+ R +L S + C+ F S +
Sbjct: 341 SVTSMDFHPTRHTLLLVGSTNGEITLWEVGMRERLFSKPFKIWDIQACSPQFQVSFVVSG 400
Query: 290 YAVGYDWSKGHEHYNPNK 237
A H + PN+
Sbjct: 401 VAFAKHLIHLHAYQQPNE 418
>03_05_0723 -
27143559-27143648,27144020-27144192,27144284-27144364,
27144556-27144609,27146556-27146574
Length = 138
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -3
Query: 582 AGQRGGPRGHPVREPDQPQGQLHVQVPPDHGSGGRLPG 469
A R PR PVR P QP Q P +G G L G
Sbjct: 7 ARSRPAPRAAPVRNPPQPARQAPPPAPAQNGGGSILGG 44
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 449 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQ 300
I FHP LAT SD + FWD + + ST + FN G+
Sbjct: 213 IDFHPHEFLLATGSSDKTVKFWDLETFELIGSTGPETTGVRSMTFNPDGR 262
>05_01_0579 -
5196888-5196970,5197063-5197621,5197704-5197786,
5199165-5199279,5199376-5199473,5200136-5200183,
5200313-5200415,5201003-5201119,5201254-5201430,
5202563-5202593,5203492-5203604,5203824-5204036
Length = 579
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 292 PMQSGMTGLRVTSTTTPIRRRSFTCEHLTKNSKRVRHNNP 173
P+ + T+T++P+RR C HL S + + NP
Sbjct: 141 PLNLSFSMAGATTTSSPLRRMESVCRHLLPASPPILYQNP 180
>02_04_0277 -
21494616-21494747,21494830-21494916,21495025-21495157,
21495267-21495540,21495829-21495955,21496048-21496311
Length = 338
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 588 LRAGQRGGPRGHPVREPDQPQGQLHVQVP 502
+ AG RGGPRG P P +++ VP
Sbjct: 1 MEAGNRGGPRGPGAARPGGPPKPVNIDVP 29
>08_01_0555 - 4871996-4872652
Length = 218
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 618 QGQEEQAADG-LRAGQRGGPRGHPVREPDQPQGQLHVQVPPDHGSGG 481
+G+++Q DG + +G G P + D PQG VQ HG G
Sbjct: 93 EGEKKQIPDGSAQPSNKGATDGSPGNQGDDPQGVHRVQGDGVHGVQG 139
>08_02_0632 +
19515234-19515374,19515489-19515656,19518907-19518993,
19519551-19519685,19519778-19519882,19519968-19520059,
19520147-19520252,19520320-19520424,19520516-19520929
Length = 450
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = -1
Query: 509 KCHRTTGAVGGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSL 330
KC + GA+ G+ D + A+HP LAT D + W D R +S +L +
Sbjct: 310 KCGKAIGALKGHLDYSFAS--AWHPDGNILATGSQDTTCRLW--DIRNLSESVAVLGGRM 365
Query: 329 --TKC-AFNHSGQIFAYAVGYDWSKGHEHY 249
+C F+ G+ A A D+ ++ Y
Sbjct: 366 GSIRCIKFSSDGRFLATAEPVDFVHIYDSY 395
>06_03_0914 +
25920277-25920405,25920783-25920810,25920890-25920990,
25921356-25921479,25921793-25921903,25922222-25922397,
25922766-25922848,25922935-25923007,25923630-25923695,
25923776-25923818,25924600-25924739,25924878-25925090,
25925397-25925481,25925558-25925852,25926855-25927110,
25927237-25927450,25927701-25927912,25928054-25928203
Length = 832
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 461 AVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQ 300
+V IA+H +G LATV D +D A ++ E +T F+ G+
Sbjct: 447 SVTKIAYHRANGLLATVADDMVLILFDTVAMKMVRRFEGHTDRVTDLCFSEDGK 500
>11_01_0488 +
3770410-3770774,3771197-3771284,3771383-3771466,
3772128-3772224,3772324-3772411,3772800-3772848,
3773044-3773238,3773713-3774159
Length = 470
Score = 28.3 bits (60), Expect = 7.3
Identities = 28/114 (24%), Positives = 45/114 (39%)
Frame = -1
Query: 623 FFKDKKSKQPTGFALGSVEGRVAIQYVNPTNPKDNFTFKCHRTTGAVGGYQDIYAVNDIA 444
F DK T + +VE + ++ + K N + H GA+ N I+
Sbjct: 147 FVYDKSKDVNTDWTFPTVEDQSEMKISYAKSSKSNPVARWHICQGAI---------NAIS 197
Query: 443 FHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAV 282
F P LAT+G DG +D + + +L C++ IF YA+
Sbjct: 198 FSPDGTYLATIGRDGYLRVFDFAKEQLIFGGKSYFGALLCCSWRTWKVIFDYAL 251
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -3
Query: 621 FQGQEEQAADGLRAGQRGGPRGHPVREPDQPQGQLHVQVPPDHGSGGRLPG 469
F+G + D R G RGGPRG P + G P SGGR PG
Sbjct: 117 FEGDRPRFGD--RDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGR-PG 164
>08_02_0130 -
12900202-12900277,12901457-12901536,12901654-12901740,
12902475-12902636,12904766-12904855,12904959-12905078,
12905671-12905798,12905873-12906272
Length = 380
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 458 VNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTE 348
+N + P++ T+ T G D + WD + LK ++
Sbjct: 149 INRAVWGPLNRTIITAGEDATIRIWDTETGQCLKESD 185
>08_01_0595 + 5250093-5250219,5251579-5251624,5252732-5252825
Length = 88
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 478 PPTAPVVRWHLNVKLSLGLVG 540
P P+VRW L++ LSL L G
Sbjct: 5 PSPHPLVRWQLSLSLSLSLAG 25
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 605 SKQPTGFALGSVEGRVAIQYVNPTNPKDNFTFKCHRTTGAVGGYQD 468
SKQP + + G + + T +++ T K TG+VG Q+
Sbjct: 2150 SKQPDDIKMAEMSGNPSTAVCSSTQQQEDNTLKAAHATGSVGEEQN 2195
>05_03_0370 +
13144612-13144639,13144749-13145260,13146995-13147327,
13147690-13147699,13149704-13149816,13151187-13151258,
13151397-13151432,13151552-13151597,13151726-13151828,
13151916-13151973,13152231-13152281
Length = 453
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = -3
Query: 612 QEEQAADGLRAGQRGGPRGHPVREPDQPQGQLHVQVPPDHGSGGRLPGHL 463
Q EQ DGL QR R HPV+ P G++ ++ G G +LPGHL
Sbjct: 190 QPEQRVDGL---QR---RPHPVQVP----GEVPLRRDLVPGGGAQLPGHL 229
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,144,466
Number of Sequences: 37544
Number of extensions: 330828
Number of successful extensions: 1267
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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