Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A17
(795 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 211 1e-53
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 143 4e-33
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 80 5e-14
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 75 3e-12
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 73 1e-11
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 71 3e-11
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 67 4e-10
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 66 7e-10
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 62 2e-08
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 62 2e-08
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 58 3e-07
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 48 3e-04
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 46 8e-04
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 46 0.001
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 40 0.072
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 38 0.38
UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to endonuclea... 36 1.2
UniRef50_UPI000058732A Cluster: PREDICTED: similar to endonuclea... 36 1.5
UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole geno... 35 2.0
UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to endonuclea... 35 2.7
UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix p... 35 2.7
UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome sh... 35 2.7
UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gamb... 35 2.7
UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales b... 34 4.7
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 34 4.7
UniRef50_Q0CTY7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_UPI0000E478ED Cluster: PREDICTED: similar to tryptophan... 33 8.3
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 211 bits (516), Expect = 1e-53
Identities = 97/140 (69%), Positives = 116/140 (82%)
Frame = -2
Query: 692 PMICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPW 513
PMIC+RSKMSLRNKVTLY TCIRPVM YASVVFAHAAR H+ + Q +QSRFCR+AVGAPW
Sbjct: 797 PMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPW 856
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNYIPDPADRMESSRRRP 333
FVRNVDLHDDL LESI K+++S S R+FDKA RH++ LIVAA +Y P+P S RRRP
Sbjct: 857 FVRNVDLHDDLGLESIRKHMKSVSERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRP 916
Query: 332 KHVISDPPDPLTVLLGTSST 273
+HV++DP DP+T+ L T S+
Sbjct: 917 RHVLTDPSDPITLALDTFSS 936
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 143 bits (347), Expect = 4e-33
Identities = 62/134 (46%), Positives = 91/134 (67%)
Frame = -2
Query: 692 PMICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPW 513
P++C +SKMSLR+K+ LY TCIRPV+ Y+ VFAH ++ + Q+ Q+R R G PW
Sbjct: 8 PLLCHKSKMSLRHKLILYKTCIRPVITYSCPVFAHMSKDNFHKLQVFQNRVLRKVTGTPW 67
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNYIPDPADRMESSRRRP 333
++R VDLH +L++ SI Y++S ++ +F+KAA H PL+V+A NY P P RRRP
Sbjct: 68 YIRRVDLHRNLEIPSIWTYVKSLTISYFEKAANHPSPLVVSAANYQPVP--NAARPRRRP 125
Query: 332 KHVISDPPDPLTVL 291
+H+ DPPD +T +
Sbjct: 126 RHIFIDPPDEITAV 139
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 80.2 bits (189), Expect = 5e-14
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 510
++ RSK+SL NK+T+Y + P Y ++ A H+K Q IQ++ R+ G WF
Sbjct: 779 LLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWF 838
Query: 509 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNYIPDPADRMESSRRRPK 330
VRN LH DL L ++ + S R+ D+ RH + L A P R+ +RR+P+
Sbjct: 839 VRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQPR 894
Query: 329 HVISDPP 309
+I+ P
Sbjct: 895 DLITRSP 901
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHA-ARIHLKSFQIIQSRFCRIAVGAPW 513
++CRRS +S+ NK+ LY + IRP M YASV +A A + + Q Q++F R A APW
Sbjct: 1251 LVCRRSALSIDNKLLLYKSVIRPTMTYASVAWAFAPCKTRMHKLQTFQNKFLRQAFNAPW 1310
Query: 512 FVRNVDLHDDLDLESISKYLQSAS 441
FVRN LH ++ + ++ ++ + +
Sbjct: 1311 FVRNNQLHREVKMPTMEEFFRETA 1334
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/97 (32%), Positives = 57/97 (58%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 510
+I RS +SL K LY + ++P+ Y S ++ +A+R ++ Q QSR RI GAPW+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 509 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPL 399
+RN ++H DL ++ + + + ++ +K H +PL
Sbjct: 830 LRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 71.3 bits (167), Expect = 3e-11
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 510
+I R+K+SL KV +Y + + P + Y V+ AA+ HL +I+Q++ R GAPW+
Sbjct: 784 LIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWY 843
Query: 509 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNYIPDPAD-RMESSRRRP 333
+R D+ DL + + LQ+ + ++ ++ H + L G AD R RR
Sbjct: 844 MRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLK 903
Query: 332 KHVISDPPD 306
+H D P+
Sbjct: 904 RHHPHDLPN 912
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/97 (29%), Positives = 54/97 (55%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 510
++ R+S M+LR K +Y C+ P+ +Y ++ AA+ + Q++Q+R R P++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 509 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPL 399
VR LH DL+L ++ + + + R+ D+ RH L
Sbjct: 845 VRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/104 (26%), Positives = 57/104 (54%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWF 510
++CR++ ++L NK LY + +RP++ YAS + AA +L +Q++ R APWF
Sbjct: 374 LLCRKTHLNLANKRLLYLSTLRPILSYASPCWGSAASSNLSHILTVQNKIIRQISNAPWF 433
Query: 509 VRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNY 378
+RN +L DL + ++ +++ + ++ +P + +Y
Sbjct: 434 IRNKNLEKDLKIPNLKDFIKKLNQDFANRTGTSNNPSLTYTIDY 477
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep: ORF1
- Drosophila melanogaster (Fruit fly)
Length = 884
Score = 61.7 bits (143), Expect = 2e-08
Identities = 23/81 (28%), Positives = 48/81 (59%)
Frame = -2
Query: 692 PMICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPW 513
P+I R+SK+S+ NK+ ++ T P+++Y S V+ A+ H+K QI Q++ ++ + P+
Sbjct: 803 PLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPY 862
Query: 512 FVRNVDLHDDLDLESISKYLQ 450
+ LH ++ + + +Q
Sbjct: 863 YTNTKYLHIKAGVQKVQQKIQ 883
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; n=80;
Culicimorpha|Rep: Reverse transcriptase homolog protein -
Chironomus thummi
Length = 883
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = -2
Query: 692 PMICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPW 513
P+I R ++ +RNK+ +Y IRP+ Y F A+ HL+ Q++Q++F RI +
Sbjct: 786 PLISRNLQLDVRNKLLIYKLAIRPIFTYGCSAFGSMAKTHLQKLQVLQNKFLRIVLNKTR 845
Query: 512 FVRNVDLHDDLDLESI 465
+ R DLH + + SI
Sbjct: 846 YERITDLHTEAKIPSI 861
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 57.6 bits (133), Expect = 3e-07
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = -2
Query: 368 PADRMESSRRRPKHVISDPPDPLTVLLGTSSTGH-XXXXXXXXXXXXXRVN*LSDTAH*V 192
P D SRR P HV+SDP D L+VLL SSTG+ + L+ ++
Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGYCPCRVRRATNPKTQPMKFLAGSSQ-- 83
Query: 191 SRRIFSVGRVSDXGGRFCEARLLLGFVLATSSGLSPVSSPTK 66
S R S GRFCEA LLLG VLA S LSP P +
Sbjct: 84 SSRFRS-------DGRFCEALLLLGLVLANSLRLSPYELPNR 118
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAA-RIHLKSFQIIQSRFCRIA 528
++CRRS +S+ NK+ LY + IRP M YA V +A A + + Q Q++F R A
Sbjct: 342 LVCRRSALSIDNKLLLYKSVIRPTMTYAPVAWAFAPYKTRMHKLQTFQNKFLRQA 396
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 46.4 bits (105), Expect = 8e-04
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = -2
Query: 689 MICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPW 513
+I + S + K+ L+ + P+ YA ++ + K Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLI--VAAGNYIPDPADRMESSRR 339
+ R D+ +++S + AS R+ + HE+PLI + Y P +R+E S+
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP---NRLELSKN 958
Query: 338 R 336
R
Sbjct: 959 R 959
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/97 (25%), Positives = 44/97 (45%)
Frame = -2
Query: 668 MSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLH 489
+S + K+ + IR + YA V+ A HLK + R R + PW++RN +
Sbjct: 1113 VSYKTKLRAFSAIIRSIQTYAIPVWGAAGESHLKPIEGSFFRMLRSILDIPWYIRNKQIL 1172
Query: 488 DDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNY 378
++ + S ++ + + D H +P IVA Y
Sbjct: 1173 KEVAITSPNQAAPIFAAKLHDSMKNHCNPTIVATTTY 1209
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 39.9 bits (89), Expect = 0.072
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -1
Query: 249 SLATKGSTSKLTLRHSPLSFSPDLLSGSRFR 157
SL T G +++ R PLSFSPDLLSGSRFR
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFR 410
>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase
- Strongylocentrotus purpuratus
Length = 1197
Score = 37.5 bits (83), Expect = 0.38
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = -2
Query: 689 MICRRSKMS--LRNKVTLYXTCIRPVMIYASVVFAHAARIH-LKSFQIIQSRFCRIAVGA 519
MICR K S + + V +Y T IRP++ YAS +++ + + + + IQ R CRI
Sbjct: 997 MICRLRKASVPMHDLVNIYSTYIRPLLEYASPLWSTSITTNQINDIERIQKRICRI---- 1052
Query: 518 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAA--GNYIPDPADRMESS 345
+R+ + + LE++ + S RH L+ ++ +++P + S
Sbjct: 1053 --ILRDQYISYEHALETLG--ISRMSERHEQLLLSFAKSLLASSRHRDFLPPLRSEISSR 1108
Query: 344 RRRPKHVISDP 312
R R H + P
Sbjct: 1109 RLRYSHHLDTP 1119
>UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 405
Score = 35.9 bits (79), Expect = 1.2
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = -2
Query: 686 ICRRSKMSLRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCR 534
+ + ++ + KV Y T ++P+M YAS+++ + ++K +++Q R+ R
Sbjct: 242 VTTKGQLHPKVKVLCYNTLLQPIMEYASIIWDPHTQANIKKLEMVQRRYVR 292
>UniRef50_UPI000058732A Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 242
Score = 35.5 bits (78), Expect = 1.5
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -2
Query: 653 KVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCR 534
KV Y T ++P+M YAS+ + + ++K +++Q R+ R
Sbjct: 128 KVLCYNTLLQPIMEYASITWDPRTQANIKKLEVVQRRYVR 167
>UniRef50_A7PL06 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=8; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 507
Score = 35.1 bits (77), Expect = 2.0
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 599 VFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKA 420
VF H RIH + I++ C V PWF N+DL D ++ Y+ S+ +F K
Sbjct: 41 VFLHLHRIHDRVTDILEKSGCTFLVKGPWFC-NMDLLVTTDPANV-HYIMSSHFSNFPKG 98
Query: 419 A 417
+
Sbjct: 99 S 99
>UniRef50_UPI0000E4756E Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 293
Score = 34.7 bits (76), Expect = 2.7
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -2
Query: 662 LRNKVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAV 525
LR KV Y T + PV+ YA+VV+ + ++ + IQ R+ R A+
Sbjct: 215 LRTKVLCYKTLVLPVLEYAAVVWDPFTQKNITRLEKIQRRYARFAL 260
>UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix
protein 4 (bHLHB4).; n=1; Xenopus tropicalis|Rep: Class
B basic helix-loop-helix protein 4 (bHLHB4). - Xenopus
tropicalis
Length = 195
Score = 34.7 bits (76), Expect = 2.7
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -2
Query: 551 QSRFCRIAVGAPWFVRNVDLHDDLD-LESISKYLQSASMRHFDKAARHEDPLIVAAGNYI 375
+ R R+++ A R DL+D LD L S+ Y S S+R K A ++ A NYI
Sbjct: 86 ERRSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIAT-----LLLAKNYI 140
Query: 374 PDPADRMESSRRRPKHVISDPP 309
A +E RR ++ PP
Sbjct: 141 LMQAQALEEMRRLVAYLNQGPP 162
>UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 156
Score = 34.7 bits (76), Expect = 2.7
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -2
Query: 497 DLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNYIPDPA----DRMESSRRRPK 330
+L D D E + S H + A P I+A G Y+ P+ ++E R R
Sbjct: 81 ELTDMSDQELAEVFADSDEEAHSESPAGSYQP-IIARGGYMRSPSWTRCSKVEPPRERKH 139
Query: 329 HVISDPPDPLTVL 291
H SD PDPL L
Sbjct: 140 HSDSDTPDPLMKL 152
>UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028649 - Anopheles gambiae
str. PEST
Length = 158
Score = 34.7 bits (76), Expect = 2.7
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -2
Query: 647 TLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGAP 516
TL+ + +R ++ Y SVV++ AR H++ + +Q F R++ P
Sbjct: 97 TLFCSLVRSILEYCSVVWSPTARTHVERIERVQRSFTRLSSPIP 140
>UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales
bacterium SWAT-3|Rep: VCBS repeat protein - Vibrionales
bacterium SWAT-3
Length = 4022
Score = 33.9 bits (74), Expect = 4.7
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -2
Query: 512 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEDPLIVAAGNYIPDPADRMESSRRRP 333
F + D HD + + + + S+ H D LI A G IP A + +
Sbjct: 1709 FTHSTDGHDKWSYSADNSHAEVQSLSHGDSLT-DTITLITADGTRIPLTAKILGTD---- 1763
Query: 332 KHVISDPPDPLTVLLGTS 279
HVI D PD LT LGT+
Sbjct: 1764 DHVIIDTPDALTAALGTA 1781
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 653 KVTLYXTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCRIAVGA 519
K+TLY C+RP + Y S +F++ + +Q RF R +G+
Sbjct: 765 KLTLYKICVRPSLEYCSFIFSNMNTTDKIRVEDVQRRFTRQLLGS 809
>UniRef50_Q0CTY7 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative uncharacterized
protein - Aspergillus terreus (strain NIH 2624)
Length = 934
Score = 33.5 bits (73), Expect = 6.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = -2
Query: 488 DDLDLESISKYLQSAS--MRHFDKAARHEDPLIVAAGNYIPDPADRMESSRRRPKHVISD 315
DDL++ + + L + AARH + + Y D ++ +S +RP + +
Sbjct: 791 DDLEINELRQQLDDKDRMLAALRSAARHREVAHINTDTYSTDGKEKSKSPEKRPSSISTP 850
Query: 314 PPDP--LTVLLGTSSTG 270
P DP L L G + G
Sbjct: 851 PADPDVLAPLPGETKDG 867
>UniRef50_UPI0000E478ED Cluster: PREDICTED: similar to tryptophan
2,3-dioxygenase; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tryptophan 2,3-dioxygenase -
Strongylocentrotus purpuratus
Length = 413
Score = 33.1 bits (72), Expect = 8.3
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -2
Query: 680 RRSKMSLRNKVTLYXTCIRPVMIYASVVFAHA-ARIHLKSFQIIQSRFCRIAVGAP-WFV 507
R+ ++ + V +Y IRPV+ YAS V++ + + +Q R CR+ + WF
Sbjct: 47 RKCRLPTSDLVAIYAMYIRPVLEYASPVWSSSLTTAQSNDIERVQKRVCRVILAYELWFK 106
Query: 506 RNVDLHDDL 480
+ + D +
Sbjct: 107 QTIHEVDSI 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,081,462
Number of Sequences: 1657284
Number of extensions: 13583844
Number of successful extensions: 38226
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 36420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38212
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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