Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_A15
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.87 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.6  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   4.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.1  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +3

Query: 414 ILFVDSLSNTIDFLVHFSTVMIT 482
           +LF+   ++T+ F+++ ST++IT
Sbjct: 346 VLFIQVAADTVLFILNISTIIIT 368


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 496 VLVRKVIITVLK*TRKSIVLDKES 425
           +L  K I+T+LK T+ +I + KES
Sbjct: 85  LLYSKQIVTILKKTKSNIFILKES 108


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 737 WYHRDKVKWAREH 699
           W+   ++KW +EH
Sbjct: 267 WFQNRRMKWKKEH 279


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 737 WYHRDKVKWAREH 699
           W+   ++KW +EH
Sbjct: 267 WFQNRRMKWKKEH 279


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 737 WYHRDKVKWAREH 699
           W+   ++KW +EH
Sbjct: 267 WFQNRRMKWKKEH 279


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 737 WYHRDKVKWAREH 699
           W+   ++KW +EH
Sbjct: 223 WFQNRRMKWKKEH 235


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 737 WYHRDKVKWAREH 699
           W+   ++KW +EH
Sbjct: 267 WFQNRRMKWKKEH 279


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 737 WYHRDKVKWAREH 699
           W+   ++KW +EH
Sbjct: 55  WFQNRRMKWKKEH 67


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 737 WYHRDKVKWAREH 699
           W+   ++KW +EH
Sbjct: 267 WFQNRRMKWKKEH 279


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 129 YTQEGSYSRRSCGY 88
           Y Q  +Y   SCGY
Sbjct: 338 YDQSSAYDASSCGY 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,578
Number of Sequences: 336
Number of extensions: 3825
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)