Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A12
(798 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 140 3e-32
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 135 1e-30
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 131 2e-29
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 122 8e-27
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 119 7e-26
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 106 6e-22
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 106 7e-22
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 95 1e-18
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 92 1e-17
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 92 1e-17
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 91 4e-17
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 83 8e-15
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 82 1e-14
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 79 1e-13
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 79 2e-13
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 75 2e-12
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 64 5e-09
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 59 1e-07
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 59 1e-07
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 3e-06
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 4e-06
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 53 1e-05
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 52 1e-05
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 52 2e-05
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 52 2e-05
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 50 5e-05
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 50 5e-05
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 49 1e-04
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 47 5e-04
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 47 5e-04
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 46 0.001
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 45 0.002
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 45 0.002
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 45 0.003
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.004
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.006
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 42 0.024
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 40 0.055
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 37 0.51
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 37 0.67
UniRef50_A4JDZ9 Cluster: Membrane protein-like protein; n=2; Bur... 36 0.89
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 36 1.6
UniRef50_A6RVB3 Cluster: Predicted protein; n=1; Botryotinia fuc... 35 2.7
UniRef50_Q1N2J6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, wh... 33 6.3
UniRef50_A4CKK3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 140 bits (340), Expect = 3e-32
Identities = 77/151 (50%), Positives = 88/151 (58%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVGASEATLL ML I PF+YGL + QVYDSG++FAP ILDI +DL +F +G+ANVAA+
Sbjct: 166 KVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILDITEDDLIKQFMSGLANVAAV 225
Query: 397 SLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXX 218
SL IGYPT+AS PHSI NGFKNLL K F+ DPS F
Sbjct: 226 SLQIGYPTVASVPHSIVNGFKNLLAVAVATDITFKEAEQAKAFVADPSAF---AALVPAA 282
Query: 217 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
SDDDMGFGLFD
Sbjct: 283 QEDKKEDDKAAAAAEESEEESDDDMGFGLFD 313
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/58 (70%), Positives = 52/58 (89%)
Frame = -2
Query: 749 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDQ 576
APA+ GAIAP+ V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G++
Sbjct: 109 APAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEK 166
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 135 bits (326), Expect = 1e-30
Identities = 72/152 (47%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++
Sbjct: 166 KVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASV 225
Query: 397 SLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXX 221
L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 226 CLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAAT 285
Query: 220 XXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 286 TAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
Score = 90.2 bits (214), Expect = 5e-17
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 579
K A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GD
Sbjct: 106 KVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGD 165
Query: 578 Q 576
+
Sbjct: 166 K 166
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 131 bits (316), Expect = 2e-29
Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Frame = -3
Query: 586 PVTKVGASEATLLNMLN---ISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGV 416
P KVGASEATLLNMLN ISPFSYGL+++QVYD+G++++PE+LDI + L +F GV
Sbjct: 163 PGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGV 222
Query: 415 ANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX 236
N+A++ L IGYPT+AS PH+I NG+K +L +K ++ DP+ F
Sbjct: 223 RNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAA 282
Query: 235 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 283 PVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
Score = 93.5 bits (222), Expect = 6e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 579
K A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGD
Sbjct: 106 KVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGD 165
Query: 578 Q 576
+
Sbjct: 166 K 166
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 122 bits (295), Expect = 8e-27
Identities = 58/110 (52%), Positives = 76/110 (69%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVG+SEA LL L I PFSYGLVV+ VYD+G++F PE+L++ +DL KF AGV+ + AL
Sbjct: 169 KVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITAL 228
Query: 397 SLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 248
SLAI YPT+A+APH N +KN+L +KEF+KDP+KF
Sbjct: 229 SLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKF 278
Score = 79.8 bits (188), Expect = 7e-14
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 579
K APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GD
Sbjct: 109 KVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGD 168
Query: 578 Q 576
+
Sbjct: 169 K 169
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 119 bits (287), Expect = 7e-26
Identities = 55/110 (50%), Positives = 75/110 (68%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVG+SEA LL L I PFSYGLVV+ VYD+G++F+PE+LD+ + L KF +G++ V +L
Sbjct: 168 KVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSL 227
Query: 397 SLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 248
+LA+ YPT+A+APH N +KN L +KEF+KDPSKF
Sbjct: 228 ALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKF 277
Score = 79.8 bits (188), Expect = 7e-14
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 579
K APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GD
Sbjct: 108 KVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGD 167
Query: 578 Q 576
+
Sbjct: 168 K 168
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 106 bits (255), Expect = 6e-22
Identities = 52/109 (47%), Positives = 69/109 (63%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVG SEA LL L + PFS+GL VK VYD+G++++ E+L + + L KF GV N+AA+
Sbjct: 176 KVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLKLTNDILLGKFMNGVRNIAAM 235
Query: 397 SLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSK 251
SL +G PT ASAPHSI +GFKNL+ + +KDPSK
Sbjct: 236 SLTLGIPTAASAPHSIVSGFKNLVSIAHVVDYTFSQAEGLLAVLKDPSK 284
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = -2
Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 591
+K A A+ G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++
Sbjct: 115 SKVPAEAKAGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLI 171
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 106 bits (254), Expect = 7e-22
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVGASEATLL LNI PF+YGL K +YD+G ++P I + EDL KF+ G+ N+AA+
Sbjct: 165 KVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISE---EDLINKFKQGIFNIAAI 221
Query: 397 SLAIGYPTIASAPHSIANGFKNLL 326
SL IGYPT+AS PHS+ N FKNLL
Sbjct: 222 SLEIGYPTVASIPHSVMNAFKNLL 245
Score = 69.7 bits (163), Expect = 8e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -2
Query: 749 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDQ 576
APA+ G AP V+IPA TG+ P +TSF Q L I TKI++G I+I+N+VHI+K G +
Sbjct: 108 APAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQK 165
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = -3
Query: 565 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAI 386
S+ T+ + ++ G ++QVY G+IF+P+ILDIKPEDLRAKFQ GVAN+A +SL I
Sbjct: 746 SKGTIEIINDVPILKSGDKIEQVY--GSIFSPDILDIKPEDLRAKFQVGVANLAGVSLEI 803
Query: 385 GYPTIASAPHSIANGFKNLL 326
GYPT+AS PH+IA GF+NLL
Sbjct: 804 GYPTLASVPHNIAIGFRNLL 823
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 656 ALSIPTKISKGTIEIINDVHILKPGDQ 576
ALSIP KISKGTIEIINDV ILK GD+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDK 764
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVG++EA LL LNI+PFSY L V V+D+G ++ P +LDI E + ++ ++NVA++
Sbjct: 184 KVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGVLDITSESIIESYKRVISNVASV 243
Query: 397 SLAIGYPTIASAPHSIANGFKNLL 326
SL G PT ASAPHSI FKNLL
Sbjct: 244 SLESGIPTRASAPHSIMRVFKNLL 267
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = -2
Query: 764 RTKSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKP 585
R +APAR G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+
Sbjct: 122 RHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITE 181
Query: 584 GDQ 576
G++
Sbjct: 182 GEK 184
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVGASEA +LN+L I PF Y L ++ +YD G ++ P IL I E L KF+ G+ NV L
Sbjct: 168 KVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILAITEEVLGEKFRTGLRNVTGL 227
Query: 397 SLAIGYPTIASAPHSIANGFKNL 329
+LA+GYP ASAPH + + FK++
Sbjct: 228 ALAVGYPCAASAPHLVGSAFKDI 250
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = -2
Query: 743 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDQ 576
A+ GAIAP V++ T + P AL+I KI KGTIEI + ++ G +
Sbjct: 113 AKVGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQK 168
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 90.6 bits (215), Expect = 4e-17
Identities = 54/151 (35%), Positives = 72/151 (47%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KV AS ATLL N++P SYG+ V+ VYD G I+ ++LDI ED+ KF GV+NVAAL
Sbjct: 167 KVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAAL 225
Query: 397 SLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXX 218
S A G T AS PH FKN++ +K+++++P F
Sbjct: 226 SRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWVENPEAFAAVAAPASAA 285
Query: 217 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
D MGFG+FD
Sbjct: 286 KADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -2
Query: 755 SQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDQ 576
S PAR G IAP+ V IP TG+ P TSF ++L I TKI KG IEI VH++K G++
Sbjct: 108 SSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEK 167
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 83.0 bits (196), Expect = 8e-15
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = -2
Query: 752 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDQ 576
QAPAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+
Sbjct: 115 QAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDR 173
Score = 74.1 bits (174), Expect = 4e-12
Identities = 39/84 (46%), Positives = 51/84 (60%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
+V S ATLL L+ISPF Y + V+ V+D G +F E L I + + G++NVAAL
Sbjct: 173 RVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSITDDVVEKYLLEGISNVAAL 232
Query: 397 SLAIGYPTIASAPHSIANGFKNLL 326
SL G PT A+ PH I + FK LL
Sbjct: 233 SLGAGIPTAATLPHMIMDAFKTLL 256
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVG S+A LL L I+PF YG V+ VYD+G ++ + LD+ D+ KFQ GV A+
Sbjct: 173 KVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALDLTESDIVKKFQEGVQAATAI 232
Query: 397 SLAIGYPTIASAPHSIANGFKNLL 326
SLA PT A+ PH + N F+ LL
Sbjct: 233 SLAANLPTEAACPHLMLNAFQALL 256
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/61 (47%), Positives = 46/61 (75%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 579
K+ +PA+ G IAP V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+
Sbjct: 113 KAPSPAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGE 172
Query: 578 Q 576
+
Sbjct: 173 K 173
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVG S+A LL MLNI PF Y + + Q+Y+ G I+ ++DI ED+ + ++ VAA
Sbjct: 188 KVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDIFTSLRNAISTVAAA 247
Query: 397 SLAIGYPTIASAPHSIANGFKNLL 326
SL G T AS P+++ N FK++L
Sbjct: 248 SLGAGVITQASMPYNVRNAFKDIL 271
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = -2
Query: 752 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDQ 576
+A A+ G +A V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L GD+
Sbjct: 130 EACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDK 188
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/83 (45%), Positives = 48/83 (57%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
K+G SE +LL +NI PFSYG+ YD+G I E+L I P + F +AA+
Sbjct: 184 KIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISPSVILDAFAQNTLRIAAV 243
Query: 397 SLAIGYPTIASAPHSIANGFKNL 329
SLA GY T S PH I N FK+L
Sbjct: 244 SLATGYVTAPSVPHFIQNAFKDL 266
Score = 58.0 bits (134), Expect = 3e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = -2
Query: 749 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 582
APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V + G
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKG 182
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
KVG S+A LL L PF YG+ V YD+G+I + + + D+ AKFQ V NV+A+
Sbjct: 184 KVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDIVAKFQQNVRNVSAI 243
Query: 397 SLAIGYPTIASAPHSIANGFKNL 329
SL G+ ASAP+ +AN FK+L
Sbjct: 244 SLQNGWVNEASAPYLLANAFKDL 266
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 579
K + PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +LK G
Sbjct: 124 KVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQ 183
Query: 578 Q 576
+
Sbjct: 184 K 184
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = -2
Query: 764 RTKSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKP 585
+TK +A A+ G +AP VVI T GP++ F+ AL I TKI+KG IEI+N V+++K
Sbjct: 105 KTKRKAAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKK 164
Query: 584 GD 579
GD
Sbjct: 165 GD 166
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = -3
Query: 574 VGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 395
V S ATLL L I PF Y + +YD G I+ +L+I + AK+ AG+ +L+
Sbjct: 168 VTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLEIDDSVMEAKWNAGLEAFVSLA 227
Query: 394 LAIGYPTIASAPHSIANGFKNLL-XXXXXXXXXXXXXXXIKEFIKDPSKF 248
L +P + + PH + K+ + +KE + DPSKF
Sbjct: 228 LGANFPCLPAIPHIFMDTAKSFIGAGVEADVTEIPLVKRVKEILADPSKF 277
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +3
Query: 579 VTGLQDVYIVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWS 749
+T + D+ + D+FN T NLG + +SLEER L W GV G N D WGN T + WS
Sbjct: 162 LTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWS 218
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/106 (29%), Positives = 59/106 (55%)
Frame = +2
Query: 257 WVLNELLDGGSFFKLNLCDSSDGQKVLETIGNGMRG*SNSWVSNSQRKSSYISNSSLELG 436
WVLN +L +F+ + SD Q+VL + + WV++SQ +S +S E+
Sbjct: 55 WVLNSVLQFFNFWVDVVSSDSDSQQVLVVVDQRVTDRWQGWVTSSQGNTSNGVDSRDEVR 114
Query: 437 TEIFWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSN 574
+ D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++
Sbjct: 115 DQFIVSDIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTD 160
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 58.8 bits (136), Expect = 1e-07
Identities = 36/99 (36%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = -3
Query: 418 VANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XX 242
V NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAA 60
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 61 APVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 99
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -2
Query: 764 RTKSQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILK 588
+ + APA+PGA+ P VV+PA T L P QAL IP +I KG + I D +LK
Sbjct: 105 QNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLK 164
Query: 587 PGD 579
G+
Sbjct: 165 AGE 167
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = -3
Query: 559 ATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGY 380
A +LN L I P GL V VY+ G ++ P++L I ++ Q + L++ I Y
Sbjct: 174 ANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAY 233
Query: 379 PTIASAPHSIANGFKN 332
PT + I F N
Sbjct: 234 PTPETIEAIIQKAFLN 249
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = -3
Query: 559 ATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGY 380
+ +L+ L I P GL ++ V+ G +F PE L+I ++ RA Q+ A+ LS+ Y
Sbjct: 176 SNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAY 235
Query: 379 PTIASAPHSIANG 341
PT +AP IA G
Sbjct: 236 PTERTAPDLIAKG 248
Score = 39.9 bits (89), Expect = 0.072
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKP 585
+K+ AP G +AP +V+P +TG+ P Q + +I +G+I++++D + +
Sbjct: 108 SKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEE 167
Query: 584 GD 579
G+
Sbjct: 168 GE 169
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 749 APARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGD 579
APA+PG +A +V+PA +TGL P S F L I T + GTI I D + KPGD
Sbjct: 118 APAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGD 175
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = -2
Query: 764 RTKSQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHIL 591
+ K+ AR G IA + V +PA NTG+ GP T F +A IPTKI +GTI I+ D +
Sbjct: 90 KNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWILKDTTPV 148
Query: 590 KPGD 579
K G+
Sbjct: 149 KKGE 152
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -2
Query: 764 RTKSQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILK 588
+ K AR G IA +V+PA NTG+ P S F L IPT++ +G+I I D + K
Sbjct: 109 KQKIMREARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAK 168
Query: 587 PGD 579
PGD
Sbjct: 169 PGD 171
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -2
Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKP 585
+K++APA+ G+IAP +V+PA +T P Q + IP KI KG+I + +D I+
Sbjct: 101 SKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDE 160
Query: 584 GDQ 576
G++
Sbjct: 161 GEE 163
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -2
Query: 743 ARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGD 579
A+PG + +++PA NTG+ P S F L IPT+I G I + D + KPGD
Sbjct: 122 AKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGD 177
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPG 582
K++ +PG IA +VIP NTGL P S F L IPT+I +I I D + KPG
Sbjct: 109 KAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPG 168
Query: 581 D 579
D
Sbjct: 169 D 169
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = -2
Query: 734 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDV 600
G IA +++I L P +T FFQAL IPT+ISK +IEII D+
Sbjct: 109 GEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDI 153
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -2
Query: 764 RTKSQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIIND 603
+ K AR G IA + VV+PA NTG+ GP T F +A IPTKI +GTI I D
Sbjct: 104 KNKIMMMARGGDIASVDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWIAKD 158
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +1
Query: 619 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGA 750
+VP ILVG +AWKKEV G PVL A +GA AP AGA
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGA 44
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKP 585
K P + G IAP +VIP T + GP +T +AL + TK++ G IEI+ D ++K
Sbjct: 101 KVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVTSGKIEIVEDAVVVKE 159
Query: 584 GD 579
G+
Sbjct: 160 GE 161
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -2
Query: 743 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 582
A+ G +A V + T + P+ FQ+L+IPTKI KG IEII + +L+ G
Sbjct: 110 AKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKG 163
Score = 36.7 bits (81), Expect = 0.67
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -3
Query: 577 KVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 398
K+ +EATLL LNI PF + + Y++G + P +L+ F+ ++++ +L
Sbjct: 165 KINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSVLNFNESMFDKSFKDCLSSIESL 224
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKP 585
+KS AP + GAIAP + + + +TG+ P S +A+ IP I KG I I D + K
Sbjct: 111 SKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKE 170
Query: 584 GD 579
GD
Sbjct: 171 GD 172
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = -3
Query: 559 ATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGY 380
AT+L+ L I P GL ++ YD GTI+ PE+L + + N LS+ Y
Sbjct: 175 ATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAY 234
Query: 379 PTIASAPHSIANGF 338
PT A+ +A +
Sbjct: 235 PTGATIGTLLAKAY 248
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -2
Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKP 585
+K+ APA+PG IAP +V+P T P S Q +P +I G + I D ++K
Sbjct: 117 SKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKE 176
Query: 584 GDQ 576
G++
Sbjct: 177 GEE 179
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -2
Query: 743 ARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 579
A PG A VVIPA +TG+ GP S F L + TK+ G + ++ D + KPGD
Sbjct: 115 AMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGD 170
Score = 39.5 bits (88), Expect = 0.096
Identities = 24/87 (27%), Positives = 35/87 (40%)
Frame = -3
Query: 586 PVTKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
P + A +L L I P L +K Y G + E L + E R+ N
Sbjct: 168 PGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAESLKLDLEGYRSNITEAYRNA 227
Query: 406 AALSLAIGYPTIASAPHSIANGFKNLL 326
L++ I YPT +I+ FKN +
Sbjct: 228 FTLAVEIAYPTPDVLKFTISKVFKNAI 254
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 41.5 bits (93), Expect = 0.024
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -2
Query: 743 ARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDQ 576
A+PG AP +V+PA T P S F L IPT++ +G I I D + K G +
Sbjct: 119 AQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQE 175
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 40.3 bits (90), Expect = 0.055
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -3
Query: 625 VLLKSSTMYTS*SPVTKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 446
V++K++T V + + A L L+I P GL VK + DSG I PE L I E
Sbjct: 152 VVVKATTTVVKAGEVVRPEVARA--LERLDIKPIKIGLDVKAMLDSGVILTPETLAIDTE 209
Query: 445 DLRAKFQAGVANVAALSLAI 386
+ FQ A AL+LA+
Sbjct: 210 KVLEDFQR--AYQMALNLAV 227
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 37.1 bits (82), Expect = 0.51
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKP 585
TKS+ A+ G IAP +VIP T P FQ + IP I G + I + ++K
Sbjct: 111 TKSKRAAKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQ 170
Query: 584 GDQ 576
G++
Sbjct: 171 GEK 173
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 36.7 bits (81), Expect = 0.67
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 764 RTKSQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILK 588
+TK++ A+PG AP +VIP T P Q + IP I G ++I ++K
Sbjct: 103 KTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVK 162
Query: 587 PGD 579
G+
Sbjct: 163 KGE 165
>UniRef50_A4JDZ9 Cluster: Membrane protein-like protein; n=2;
Burkholderia cepacia complex|Rep: Membrane protein-like
protein - Burkholderia vietnamiensis (strain G4 / LMG
22486) (Burkholderiacepacia (strain R1808))
Length = 706
Score = 36.3 bits (80), Expect = 0.89
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -3
Query: 619 LKSSTMYT---S*SPVTKVGASEATLLNMLNISPFSYGLV-VKQVYDSGTIFAPEILDIK 452
LK+ + YT S +P+T V + +LLN+LN+ GL + V G + EI +
Sbjct: 475 LKAPSGYTASGSATPITLVSVNLQSLLNLLNLGGLISGLTTLVDVLTLGALDLTEI-SVN 533
Query: 451 PEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 326
+ VAN + L YP S+P++++ G LL
Sbjct: 534 INLTPGQLTIPVANQSPTPLVFTYPGTPSSPYTLSAGTDQLL 575
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 758 KSQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPG 582
K P + GA+AP+ +V+ + T P Q+ IP I G + I V + K G
Sbjct: 108 KRPMPIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQG 167
Query: 581 D 579
D
Sbjct: 168 D 168
>UniRef50_A6RVB3 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 739
Score = 34.7 bits (76), Expect = 2.7
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Frame = +3
Query: 327 KRFLKPLAMECGAEAIVGYPIAKER---AATLATPAWNLARRSSGLM-----SRISGAKI 482
K FL + G + +P+A E+ +ATLA P + G++ + AK
Sbjct: 67 KNFLSRRGCQYGWKCHSHHPVATEKGASSATLALPTSQFTMATPGILKAARTANAKSAKA 126
Query: 483 VPESYTCLTTRPYENGEMFNMLRRVASEAPTLVTGLQDVYIVD 611
P T R + + +F RVA+ PT V+ ++D VD
Sbjct: 127 KPADTTVAPLRNFRSARLFLQKSRVATITPT-VSSIKDAVNVD 168
>UniRef50_Q1N2J6 Cluster: Putative uncharacterized protein; n=1;
Oceanobacter sp. RED65|Rep: Putative uncharacterized
protein - Oceanobacter sp. RED65
Length = 1407
Score = 34.3 bits (75), Expect = 3.6
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +3
Query: 384 PIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVAS 563
PI +E + W L R +M ++P+ L+ R +++ +M + + R+
Sbjct: 1201 PIIEETGLIVPIGEWVLRRACEQIMDWQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVD 1260
Query: 564 EA---PTLV-TGLQDVYIVDDFNSTL*NLGRDRK 653
E P L+ L + ++DD + TL L RK
Sbjct: 1261 ETGVDPELIELELTESILMDDIDRTLAVLNEARK 1294
>UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1153
Score = 33.5 bits (73), Expect = 6.3
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = -3
Query: 565 SEATLLNMLNISPF---SYGLVVKQVYDSGTIFAPEILDIKPEDLRA 434
+++ +LN +N F SYGL + + YD ++A ++L+I+P ++A
Sbjct: 265 NQSLVLNPINSKAFYLKSYGLRLTENYDEALVWADKVLEIEPNHIKA 311
>UniRef50_A4CKK3 Cluster: Putative uncharacterized protein; n=1;
Robiginitalea biformata HTCC2501|Rep: Putative
uncharacterized protein - Robiginitalea biformata
HTCC2501
Length = 468
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 333 FLKPLAMECGAEAIVGYPIAKERAATLATPAWNLARRSSGLMSRISGAK 479
FL L E GAE + GY IA PAW ++ ++ L+ + GA+
Sbjct: 280 FLMRLMSEFGAEILAGYTIAIRVLMFTLMPAWGMSNAAATLVGQNLGAR 328
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,975,073
Number of Sequences: 1657284
Number of extensions: 13932524
Number of successful extensions: 39112
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 37574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39085
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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