Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_A12
         (798 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...   178   6e-45
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...   178   6e-45
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...   178   6e-45
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...   178   6e-45
AY118783-1|AAM50643.1|  993|Drosophila melanogaster GH13756p pro...    31   1.8  
AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH0603...    31   1.8  
AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA...    31   1.8  
X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin prot...    30   4.2  
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros...    30   4.2  
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen...    30   4.2  
AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p pro...    30   4.2  
AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC...    30   4.2  
AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB...    30   4.2  
AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA...    30   4.2  

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score =  178 bits (434), Expect = 6e-45
 Identities = 95/155 (61%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
 Frame = -3

Query: 586 PVTKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
           P  KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222

Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXX 230
           AA+ L++GYPTIASAPHSIANGFKNLL               IKE+IKDPSKF       
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASAS 282

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
                                    DDDMGFGLFD
Sbjct: 283 AAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317



 Score =  113 bits (273), Expect = 2e-25
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -2

Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 582
           +K +APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPG
Sbjct: 105 SKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164

Query: 581 DQ 576
           D+
Sbjct: 165 DK 166


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score =  178 bits (434), Expect = 6e-45
 Identities = 95/155 (61%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
 Frame = -3

Query: 586 PVTKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
           P  KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222

Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXX 230
           AA+ L++GYPTIASAPHSIANGFKNLL               IKE+IKDPSKF       
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASAS 282

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
                                    DDDMGFGLFD
Sbjct: 283 AAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317



 Score =  113 bits (273), Expect = 2e-25
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -2

Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 582
           +K +APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPG
Sbjct: 105 SKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164

Query: 581 DQ 576
           D+
Sbjct: 165 DK 166


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score =  178 bits (434), Expect = 6e-45
 Identities = 95/155 (61%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
 Frame = -3

Query: 586 PVTKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
           P  KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222

Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXX 230
           AA+ L++GYPTIASAPHSIANGFKNLL               IKE+IKDPSKF       
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASAS 282

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
                                    DDDMGFGLFD
Sbjct: 283 AAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317



 Score =  113 bits (273), Expect = 2e-25
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -2

Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 582
           +K +APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPG
Sbjct: 105 SKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164

Query: 581 DQ 576
           D+
Sbjct: 165 DK 166


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score =  178 bits (434), Expect = 6e-45
 Identities = 95/155 (61%), Positives = 103/155 (66%), Gaps = 1/155 (0%)
 Frame = -3

Query: 586 PVTKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANV 407
           P  KVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+
Sbjct: 163 PGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL 222

Query: 406 AALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXX 230
           AA+ L++GYPTIASAPHSIANGFKNLL               IKE+IKDPSKF       
Sbjct: 223 AAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASAS 282

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
                                    DDDMGFGLFD
Sbjct: 283 AAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317



 Score =  113 bits (273), Expect = 2e-25
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -2

Query: 761 TKSQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 582
           +K +APARPGAIAPL V+IPA NTGLGPEKTSFFQALSIPTKISKGTIEIINDV ILKPG
Sbjct: 105 SKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPG 164

Query: 581 DQ 576
           D+
Sbjct: 165 DK 166


>AY118783-1|AAM50643.1|  993|Drosophila melanogaster GH13756p protein.
          Length = 993

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 734  GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 609
            GA A L +++   +TGL PE T FF+ +  PT   K  + ++
Sbjct: 925  GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 963


>AF145632-1|AAD38607.1| 1225|Drosophila melanogaster BcDNA.GH06032
            protein.
          Length = 1225

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 734  GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 609
            GA A L +++   +TGL PE T FF+ +  PT   K  + ++
Sbjct: 1157 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 1195


>AE014134-2033|AAF53072.1| 1225|Drosophila melanogaster CG6230-PA
            protein.
          Length = 1225

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 734  GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 609
            GA A L +++   +TGL PE T FF+ +  PT   K  + ++
Sbjct: 1157 GASAALVILL---STGLAPELTEFFEIIDFPTDFRKTLLGVL 1195


>X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin
           protein.
          Length = 1023

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 583 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 428
           VT VG A  ATL + L++S  +  L  + +  SGT   P ++D +P D  + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292


>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
            Drosophila retrotransposon412 genome. ).
          Length = 1237

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = -3

Query: 538  NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 359
            +I  F +G  +   YD G ++   ILD+     R + QAG+ +++ + +A   P      
Sbjct: 802  SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 858

Query: 358  HSIANGFKNL 329
            H   + FKN+
Sbjct: 859  HVSIDKFKNM 868


>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
           DNA polymerase protein.
          Length = 1000

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = -3

Query: 538 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 359
           +I  F +G  +   YD G ++   ILD+     R + QAG+ +++ + +A   P      
Sbjct: 565 SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 621

Query: 358 HSIANGFKNL 329
           H   + FKN+
Sbjct: 622 HVSIDKFKNM 631


>AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p
           protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 583 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 428
           VT VG A  ATL + L++S  +  L  + +  SGT   P ++D +P D  + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292


>AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC,
           isoform C protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 583 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 428
           VT VG A  ATL + L++S  +  L  + +  SGT   P ++D +P D  + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292


>AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB,
           isoform B protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 583 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 428
           VT VG A  ATL + L++S  +  L  + +  SGT   P ++D +P D  + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292


>AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA,
           isoform A protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 583 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 428
           VT VG A  ATL + L++S  +  L  + +  SGT   P ++D +P D  + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,863,713
Number of Sequences: 53049
Number of extensions: 657009
Number of successful extensions: 1764
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)