Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A11
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0297 - 32924162-32924605 36 0.029
02_05_0290 - 27571504-27572119,27572211-27572279,27573205-275733... 33 0.20
03_02_0892 - 12218803-12218864,12219395-12219740 33 0.35
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 33 0.35
04_03_0060 - 10511421-10512494 32 0.47
02_04_0170 + 20576149-20576889 32 0.47
11_01_0496 + 3811434-3811566,3811578-3811819 31 1.1
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 30 2.5
02_04_0242 + 21210062-21210541 30 2.5
02_02_0742 - 13605125-13605539,13605964-13606246,13606457-13606604 30 2.5
01_06_0091 - 26363070-26363361,26363467-26363625,26363708-263638... 30 2.5
07_01_0736 - 5600201-5600374,5600455-5600563,5601075-5601196,560... 29 4.4
06_03_0218 + 18219956-18220555 29 4.4
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 29 4.4
03_02_0950 + 12661008-12662312,12662403-12662576 29 4.4
02_02_0349 + 9237537-9238334 29 4.4
01_06_0581 - 30386018-30386440 29 4.4
08_01_0813 - 7902347-7902462,7902561-7902669 29 5.8
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 29 5.8
10_08_0577 + 18894171-18894917 28 7.6
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 28 7.6
>03_06_0297 - 32924162-32924605
Length = 147
Score = 36.3 bits (80), Expect = 0.029
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 516 LVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSW-ALHRTGTD 692
L+ G AAA +RS + GA R R AV + GT P E+P RS L T
Sbjct: 10 LLRGAAAAAAARSCLHRPQVGAAAAR--RAAVGVRCGGTPPAEVPGTDRSLEELPSIDTP 67
Query: 693 PSHPTPPGL 719
P PPGL
Sbjct: 68 PEFEAPPGL 76
>02_05_0290 -
27571504-27572119,27572211-27572279,27573205-27573332,
27573854-27573976
Length = 311
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/94 (28%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Frame = +3
Query: 456 LDTDICHNIEMNAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTL 635
LD I N A +GG A+ S S ++ R R SGK
Sbjct: 150 LDKSIAKNSFQRAGGCTAGGCTTASLASCRSHSAASPSSTQRSRGRSSTTCSSGK----- 204
Query: 636 PRELPPRPRSWALHRTGTDPSHPTP-PGLQTYWY 734
R+LP R W L R P P L+ WY
Sbjct: 205 -RQLPQLWRDWPLQRVLQQPQLVQPVAALELRWY 237
>03_02_0892 - 12218803-12218864,12219395-12219740
Length = 135
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 679 RCRAQDRGRGGSSRGNVPDVFPETAPRHTRWR 584
R RA+D G GGS G V D P P + +WR
Sbjct: 81 RRRARDSGDGGSGAGIVHDYRPAVLPFYEKWR 112
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Frame = +3
Query: 474 HNIEMNAETAASGGLVAGGKAAAESRSRS-TTGEHGAGRXRVCRGAVSGKTSGTLP-REL 647
H E + G ++GG++ RS T V R +T P RE
Sbjct: 561 HLSERSPTEQRFSGRLSGGRSTDNKAERSGLTKYRDRDGDSVERSVHQDRTPAKAPYREP 620
Query: 648 PPRPRSWALHRTGTDPSHPTPP 713
P S H +GT P+HP PP
Sbjct: 621 TPSSSSRGGHFSGTSPNHPLPP 642
>04_03_0060 - 10511421-10512494
Length = 357
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 531 KAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSWALHRTGTDP 695
+AAA S SR T G AG R+ A+S + + LP PP + HR G P
Sbjct: 140 RAAAISWSRGTGGS--AGERRLRAAAISERRAPPLPAAGPPPTPAAGAHRRGARP 192
>02_04_0170 + 20576149-20576889
Length = 246
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +3
Query: 504 ASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSWALHRT 683
+ GG AGG A A S S S+ V + A G T+ T PP+ +W L
Sbjct: 65 SQGGDDAGG-AGASSSSSSSAAARANTVVPVPQRAARGATAPTPRPVAPPQAGTWPLPAP 123
Query: 684 GTDPSHPTPP 713
P P PP
Sbjct: 124 AAMPPPPPPP 133
>11_01_0496 + 3811434-3811566,3811578-3811819
Length = 124
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Frame = +3
Query: 438 PASPSRLDTDICHNIEMNAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSG 617
P P ++D+ + N++ A AA T G HGAG V G G
Sbjct: 6 PTPPRKMDSAAYDAVAANSDDELDDDRRAAAAAATADAGGRTAG-HGAGEEEVGGGDDCG 64
Query: 618 KTSGTLPRE-LPPRPRSWALHRTGTDPS 698
T G L WAL R G +P+
Sbjct: 65 TTCGLSSLSVLCVALGVWALCRAGGEPA 92
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 525 GGKAAAESRSRSTTGEHGA-GRXRVCRGAVSGKTSGTLPRELPPRP 659
G + +ESRSRS G G V GA SG S P LPP P
Sbjct: 865 GPSSGSESRSRSADGRRGRYENGDVTSGANSG--SRRTPNRLPPAP 908
>02_04_0242 + 21210062-21210541
Length = 159
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 712 GGVGCDGSVPVRCRAQDRGRGGSS-RGNVPDV 620
GG G DG+ P R R RGRGG S ++PD+
Sbjct: 26 GGGGGDGAGPRRRRRARRGRGGGSPPSSLPDL 57
>02_02_0742 - 13605125-13605539,13605964-13606246,13606457-13606604
Length = 281
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 459 DTDICHNIEMNAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSG 617
++ +C + +A GGLV GG S G RV GAV+G
Sbjct: 40 ESGLCPEEDREKRSAGDGGLVLGGGGGRRKEKGSGAGGEREAGARVGDGAVTG 92
>01_06_0091 -
26363070-26363361,26363467-26363625,26363708-26363880,
26366639-26366810,26366912-26367294
Length = 392
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 546 SRSRSTTGEHGAGRXRVCRGAVSGKTS 626
S R+TTG+HGAGR R A SG S
Sbjct: 47 SPKRNTTGQHGAGRRRGGGSARSGLAS 73
>07_01_0736 -
5600201-5600374,5600455-5600563,5601075-5601196,
5602859-5602935,5603349-5603487,5604306-5604618,
5605084-5605394,5607245-5609141,5609239-5609374,
5609519-5609607,5610424-5610507,5611112-5611191,
5611312-5611446,5612340-5612585
Length = 1303
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 486 MNAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPR 656
M + TA GG GG+A A S S S++G + + S +S R L R
Sbjct: 1 MESPTAGGGG--GGGEAGAASSSSSSSGPSTSSAAAAATASASASSSAVATRYLAKR 55
>06_03_0218 + 18219956-18220555
Length = 199
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3
Query: 486 MNAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRG 605
+ A AA GG G + A R R TTG G G RV G
Sbjct: 160 VEAAQAAGGGRQRGRERRATGRWRGTTGRLGRGLKRVNGG 199
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = +3
Query: 441 ASPSRLDTDICHNIEMNAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSG- 617
A+P + + I NA A G A AAA SR +G A SG
Sbjct: 37 AAPPKPNPPITPAPARNASAAPPSGSPATAAAAAPVPSRKESGSTSAAAPAAATRKASGV 96
Query: 618 --KTSGTLPRELP 650
T+G LPR+ P
Sbjct: 97 AAATTGVLPRKPP 109
>03_02_0950 + 12661008-12662312,12662403-12662576
Length = 492
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 501 AASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTS 626
AA+GG+ GG A +++T+ H GA SG TS
Sbjct: 53 AAAGGVGVGGSAWTHQPAKTTSWTHQPSPASAAAGAGSGPTS 94
>02_02_0349 + 9237537-9238334
Length = 265
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +3
Query: 507 SGGLVAGGKAAAESRSRSTTGE----HGAGRXRVCRGAVSGKTSGTLPRELPPRPRSW 668
SGGL GG A AE R GE HG + + G T+ ++ + P W
Sbjct: 43 SGGLRTGGAALAEGRKEKRLGEKAAPHGGRKRERAKRRRGGATTFSVFQSYPSNMDGW 100
>01_06_0581 - 30386018-30386440
Length = 140
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 270 SGVRSQVLERLEMRLRSGGGGARRQ 344
SG+ +V +R+E R GGGG RR+
Sbjct: 31 SGIEVKVRKRVEKEARMGGGGRRRR 55
>08_01_0813 - 7902347-7902462,7902561-7902669
Length = 74
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 733 YQYVWSPGGVGCDGSVPVRCRAQDRGRGGSSRGN 632
Y +VW PG +GS R D GG+ G+
Sbjct: 27 YDFVWDPGNEDGEGSGEERSDGDDDAGGGADAGD 60
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 483 EMNAETAASGGLVAGGKAAAESRSRSTTGEHGAGR--XRVCRGAVSGKTSG 629
+ + A++GG GG+ A S + ST+G G G+ RGA + G
Sbjct: 160 QADPSAASAGGGGGGGRKAGSSWADSTSGSRGKGKAAEHPARGATATSLEG 210
>10_08_0577 + 18894171-18894917
Length = 248
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 645 LPPRPRSWALHRTGTDPSHPTP 710
LPPRP ++A + DP+ P+P
Sbjct: 70 LPPRPPTYAAEQCPADPADPSP 91
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 558 STTGEHGAGRXRVCRGAVSGKTS 626
S+TGEH + + CR +V+G T+
Sbjct: 384 SSTGEHSVSKLKSCRDSVAGTTT 406
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,371,198
Number of Sequences: 37544
Number of extensions: 319409
Number of successful extensions: 1681
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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