Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A11
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 30 2.2
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 30 2.2
Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 9.0
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 28 9.0
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 28 9.0
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 28 9.0
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 28 9.0
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 28 9.0
AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 612 SGKTSGTLPRELPPRPRSWALHRTGTDPSHPTPP 713
SG+ SG+ P +PP P H+ P H PP
Sbjct: 455 SGQRSGSPPGAVPPPPPPQQQHQQQQHPPHHAPP 488
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 612 SGKTSGTLPRELPPRPRSWALHRTGTDPSHPTPP 713
SG+ SG+ P +PP P H+ P H PP
Sbjct: 780 SGQRSGSPPGAVPPPPPPQQQHQQQQHPPHHAPP 813
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 612 SGKTSGTLPRELPPRPRSWALHRTGTDPSHPTPP 713
SG+ SG+ P +PP P H+ P H PP
Sbjct: 780 SGQRSGSPPGAVPPPPPPQQQHQQQQHPPHHAPP 813
>Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical
protein F26H11.4 protein.
Length = 739
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +3
Query: 531 KAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSWALHRTGTDP 695
K + E++ S G++G R +G + +LP PP P S G P
Sbjct: 150 KNSEEAKKNSKKGKNGTARRSALKGVTIPPVAASLPCPPPPPPLSERKKNVGPKP 204
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +3
Query: 585 RXRVCRGAVSGKTSGTLPRELPPRPRSWALHRTGTDPSHPTPPGLQTYWYIPXXQSRKSX 764
R + R ++ G P P S ++H T PS T PG TY + +R
Sbjct: 547 RTKETRTEITSDAEGCKKTSSTPTPSSTSVHSTTATPS--TTPGTTTYNWPTGGTTRMLP 604
Query: 765 FGHLLG 782
G ++G
Sbjct: 605 SGEIVG 610
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 489 NAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSW 668
+A T ++G V + + S +S+TG G G+ SG +SGT + ++
Sbjct: 1125 SATTLSTGDAVRSTTSGSGS-GQSSTGSGAGGSGTTASGSGSGGSSGT-GSDGVNSGKTT 1182
Query: 669 ALHRTGTDPSHPTPPG 716
AL+ GT T PG
Sbjct: 1183 ALNGDGTGSGTATTPG 1198
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 489 NAETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSW 668
+A T ++G V + + S +S+TG G G+ SG +SGT + ++
Sbjct: 1125 SATTLSTGDAVRSTTSGSGS-GQSSTGSGAGGSGTTASGSGSGGSSGT-GSDGVNSGKTT 1182
Query: 669 ALHRTGTDPSHPTPPG 716
AL+ GT T PG
Sbjct: 1183 ALNGDGTGSGTATTPG 1198
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 492 AETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSWA 671
+E S + A+ S +T E G V V+GK + T+ LP RP++
Sbjct: 224 SEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTV---NVNGKRNMTMDLGLPHRPKALG 280
Query: 672 L-HRTGTDPSH-PTP 710
L R GT + P+P
Sbjct: 281 LPSRIGTSVAELPSP 295
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 492 AETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSWA 671
+E S + A+ S +T E G V V+GK + T+ LP RP++
Sbjct: 328 SEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTV---NVNGKRNMTMDLGLPHRPKALG 384
Query: 672 L-HRTGTDPSH-PTP 710
L R GT + P+P
Sbjct: 385 LPSRIGTSVAELPSP 399
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 492 AETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSWA 671
+E S + A+ S +T E G V V+GK + T+ LP RP++
Sbjct: 379 SEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTV---NVNGKRNMTMDLGLPHRPKALG 435
Query: 672 L-HRTGTDPSH-PTP 710
L R GT + P+P
Sbjct: 436 LPSRIGTSVAELPSP 450
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 492 AETAASGGLVAGGKAAAESRSRSTTGEHGAGRXRVCRGAVSGKTSGTLPRELPPRPRSWA 671
+E S + A+ S +T E G V V+GK + T+ LP RP++
Sbjct: 379 SEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTV---NVNGKRNMTMDLGLPHRPKALG 435
Query: 672 L-HRTGTDPSH-PTP 710
L R GT + P+P
Sbjct: 436 LPSRIGTSVAELPSP 450
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 677 VQSPGPWXRWKLAWQCS 627
+Q+PG W WKL CS
Sbjct: 251 IQTPGQWKNWKLPVTCS 267
>AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical
protein C34H4.2 protein.
Length = 449
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 615 GKTSGTLPRELPPRPRSWALHRTGTDPSHPTPP 713
GK S T P PP P S + TGT S +PP
Sbjct: 370 GKAS-TTPSSAPPAPGSSSASPTGTSGSSVSPP 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,249,622
Number of Sequences: 27780
Number of extensions: 194004
Number of successful extensions: 734
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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