Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A08
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical pr... 32 0.63
U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor pro... 32 0.63
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 32 0.63
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 30 2.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 29 3.4
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 29 3.4
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 3.4
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 29 3.4
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL110487-17|CAB54422.2| 135|Caenorhabditis elegans Hypothetical... 28 7.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.8
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 28 7.8
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +3
Query: 186 ENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGSE 365
EN D DG A RR ++ A P L+ G P R + PPR +PP S
Sbjct: 269 ENEEDEDDG--AIRRGQRRAVP-LRRGTTSGPPSRLRGRMSHPMGPPRRSSGAPPSSASN 325
Query: 366 RLRLQGPSXGAPASKHAASK 425
R ++ S G P ++S+
Sbjct: 326 RRPVESSSRGPPPPPSSSSR 345
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +3
Query: 186 ENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGSE 365
EN D DG A RR ++ A P L+ G P R + PPR +PP S
Sbjct: 269 ENEEDEDDG--AIRRGQRRAVP-LRRGTTSGPPSRLRGRMSHPMGPPRRSSGAPPSSASN 325
Query: 366 RLRLQGPSXGAPASKHAASK 425
R ++ S G P ++S+
Sbjct: 326 RRPVESSSRGPPPPPSSSSR 345
>Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical
protein C33D3.1 protein.
Length = 433
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 540 LYGAPRMVPRPDPQERRGAADVRSARSRSGRSEDTAPSPSRRR 412
LY +PRP ++ GA R +S+SG + + PS SR R
Sbjct: 263 LYFKLHHIPRPTSMKKEGALQTRKRKSKSG--DSSTPSTSRAR 303
>U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor
protein.
Length = 433
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 540 LYGAPRMVPRPDPQERRGAADVRSARSRSGRSEDTAPSPSRRR 412
LY +PRP ++ GA R +S+SG + + PS SR R
Sbjct: 263 LYFKLHHIPRPTSMKKEGALQTRKRKSKSG--DSSTPSTSRAR 303
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 31.9 bits (69), Expect = 0.63
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 210 GTEAGRR----VRQAARPRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGSERLRL 377
GTE+G R RQA + H PP + PP+ A P P + VA PP +
Sbjct: 255 GTESGARHGSISRQATLTFVSHKPPPVNPPQP----AVPPKPAKISVADPP---PSTIAP 307
Query: 378 QGPSXGAPA 404
PS APA
Sbjct: 308 AAPSAPAPA 316
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +3
Query: 96 EKVPAKTTMAGQHLRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHG 266
++ P+ ++ ++LR+P + + ++ P+ ++ +RLD TE R L+HG
Sbjct: 32 QQTPSSSSSKRKNLRKPSTDDTPSSSEPL--SKKNRLDSTETAEEDNTRRRRTLKHG 86
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/97 (27%), Positives = 37/97 (38%)
Frame = +3
Query: 171 AHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAGAPFPPRTKVASPP 350
+HP A L + +Q + + Q G P PR Y + G P PP PP
Sbjct: 771 SHPQHPQHAQYLAWQQQRYHQQQQHQQQQQQGAPG--GPRPPYPYPGGPVPP-----GPP 823
Query: 351 VIGSERLRLQGPSXGAPASKHAASKETVRYPRIALTA 461
R+ P+ GAP+ AA + PR A
Sbjct: 824 ---QNRMPPPPPAQGAPSPSGAAGSNG-KQPRYGTPA 856
>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
F52G2.2a protein.
Length = 1319
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 234 RQAARPRLQHGPPR-LEPPRSNYSFAGAPFPP 326
+Q+ +PR P L PP S SF GAP PP
Sbjct: 1221 QQSYQPRYNGAPSGPLPPPSSQSSFNGAPAPP 1252
>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical protein
F52G2.2b protein.
Length = 1129
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 234 RQAARPRLQHGPPR-LEPPRSNYSFAGAPFPP 326
+Q+ +PR P L PP S SF GAP PP
Sbjct: 1031 QQSYQPRYNGAPSGPLPPPSSQSSFNGAPAPP 1062
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 513 RPDPQERRGAADVRSARSRSGRSEDTAPSPSRRRACSPGRXHWD 382
R P+ RR D ++ R+ D+ SP RRR SP R D
Sbjct: 178 RSPPRTRRDRHDSDNSPPRNRSRRDSDNSPPRRRPSSPARRRKD 221
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 234 RQAARPRLQ--HGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGSERLRLQG--PSXGAP 401
++ +RP L+ G R PR+N + AGAP AS P I R L P+
Sbjct: 13 QKPSRPFLRKGQGTARFRMPRNNKTSAGAPPTSELSSASSPSINVPRFSLSNALPNSART 72
Query: 402 ASKHAASKETVRYPRIA 452
++++ R P A
Sbjct: 73 VDSGISNEDETRPPTTA 89
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 507 DPQERRGAADVRSARSRSGRSEDTAPSPSRRRACSPGR 394
DP+ERR + + R+ R RS SPS R SP R
Sbjct: 293 DPRERRRSPEDRTVRRRSPERRRQQRSPSVERRKSPQR 330
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 234 RQAARPRLQ--HGPPRLEPPRSNYSFAGAPFPPRTKVASPPVIGSERLRLQG--PSXGAP 401
++ +RP L+ G R PR+N + AGAP AS P I R L P+
Sbjct: 13 QKPSRPFLRKGQGTARFRMPRNNKTSAGAPPTSELSSASSPSINVPRFSLSNALPNSART 72
Query: 402 ASKHAASKETVRYPRIA 452
++++ R P A
Sbjct: 73 VDSGISNEDETRPPTTA 89
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +3
Query: 144 PEGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPR----SNYSFAG 311
P+ + S P + + L + + + +A P +Q PP PP+ N S +
Sbjct: 43 PDSDDSFETFAPTQTTTGNSLKSSASSTQSTEAKPPPVQFPPPSKNPPKHVHQQNVSKSP 102
Query: 312 -APFPPRTKVASPPVIGSERLRLQGPSXGA 398
P PR +V + P I + + Q PS A
Sbjct: 103 LIPQLPRNQVPTRPQINTVQSVQQKPSASA 132
>AL110487-17|CAB54422.2| 135|Caenorhabditis elegans Hypothetical
protein Y39E4B.13 protein.
Length = 135
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -1
Query: 516 PRPDPQERRGAADVRSARSRSGRSEDTAPSPSRRRACSPGRXHWDPGGGG 367
P D E R AD+ S +S + D +P + PGGGG
Sbjct: 73 PLADKSEERTMADIESIQSEKVQIRDKKMKSKLAAPGAPPKPAQSPGGGG 122
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 306 AGAPFPPRTKVASPPVIGSERLRLQGPSXGAPASKHAASKETVRYPR 446
AG+P PPRT PP GS P+ G+P A S PR
Sbjct: 261 AGSPPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRAGSPPPPPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 306 AGAPFPPRTKVASPPVIGSERLRLQGPSXGAPASKHAASKETVRYPR 446
AG+P PPRT PP GS P+ G+P A S PR
Sbjct: 282 AGSPPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRAGSPPPPPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 306 AGAPFPPRTKVASPPVIGSERLRLQGPSXGAPASKHAASKETVRYPR 446
AG+P PPRT PP GS P+ G+P A S PR
Sbjct: 267 AGSPPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRAGSPPPPPPPR 310
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 252 RLQHGPPRLEPPRSNYSFAGAPFPPRTKVASP---PVIGSERLRLQGPSXG 395
+LQ P ++P S P PPRTK A P PV GSE +G G
Sbjct: 946 KLQSSVPTVQP-----SAPAPPIPPRTKNAPPDVEPVRGSEPPTAEGGEAG 991
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,879,483
Number of Sequences: 27780
Number of extensions: 301154
Number of successful extensions: 1262
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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