Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A05
(859 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 302 6e-81
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 283 3e-75
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 262 1e-68
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 222 1e-56
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 186 5e-46
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 186 6e-46
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 162 9e-39
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 116 6e-25
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ... 113 4e-24
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 97 4e-19
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 89 1e-16
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 87 5e-16
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 86 9e-16
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 86 9e-16
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso... 85 2e-15
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 80 6e-14
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 78 3e-13
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 77 4e-13
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 75 2e-12
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 74 4e-12
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 73 9e-12
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 72 2e-11
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 68 4e-10
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 67 5e-10
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 62 1e-08
UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-... 36 1.7
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q3EAU8 Cluster: Uncharacterized protein At3g31410.1; n=... 35 3.0
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_Q3EAT8 Cluster: Uncharacterized protein At3g32140.1; n=... 34 4.0
UniRef50_Q30V20 Cluster: ATPase; n=1; Desulfovibrio desulfurican... 33 7.0
UniRef50_A6BE46 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32; Bacteri... 33 7.0
UniRef50_Q8XHS3 Cluster: 50S ribosomal protein L3; n=7; Bacteria... 33 7.0
UniRef50_Q8IKJ3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_Q1E829 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 33 9.2
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 302 bits (742), Expect = 6e-81
Identities = 139/180 (77%), Positives = 156/180 (86%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKGKGYKGVTSRWHTKKLPR TH G K C GAWHP+RV+F+VARAGQKGYHHRTE+
Sbjct: 222 VTKGKGYKGVTSRWHTKKLPRKTHRGLR-KVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NKKIY+IGQG KDGK+IKNNAST+YDLS+KSI P+GGF HYGEV NDFVM+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 340
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
KKR++TLRKSL V TKR ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKDRI +E
Sbjct: 341 KKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1
Query: 718 KVKWAREHLEKPIPVDSVFAQDEMIDCIVSPRAKDTK 608
K+ WARE LE+ +PV+ VF QDEMID I + K K
Sbjct: 193 KLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYK 229
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 283 bits (695), Expect = 3e-75
Identities = 128/179 (71%), Positives = 147/179 (82%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKG+G KGVTSRWHTKKLPR TH G K C GAWHP+RV ++ARAGQKGYHHRTE+
Sbjct: 222 VTKGRGVKGVTSRWHTKKLPRKTHKGLR-KVACIGAWHPARVGCSIARAGQKGYHHRTEL 280
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NKKI+RIG+G H +DGK++KNNAST YD++ KSITP+GGFPHYGEVNNDFVM+KGC G
Sbjct: 281 NKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGT 340
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KKR+ITLRKSL VH R A+E I LKFIDT+SKFGHGRFQT +K AFMG KK +E
Sbjct: 341 KKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKKHLEKE 399
Score = 42.3 bits (95), Expect = 0.015
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 742 LXGVPXEXKVKWAREHLEKPIPVDSVFAQDEMIDCIVSPRAKDTK 608
L G KV WA+ LEK +PV SVF+Q E+ID I + + K
Sbjct: 185 LNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVK 229
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 262 bits (641), Expect = 1e-68
Identities = 122/179 (68%), Positives = 144/179 (80%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VT+G G+KGVTSRWHTKKLPR TH G K C GAWHPSRV+FTVARAGQKG+HHRT +
Sbjct: 174 VTRGHGFKGVTSRWHTKKLPRKTHKGLR-KVACIGAWHPSRVAFTVARAGQKGFHHRTII 232
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GP
Sbjct: 233 NNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 289
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
KKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 290 KKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 222 bits (542), Expect = 1e-56
Identities = 105/180 (58%), Positives = 126/180 (70%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKG G+ GV RW LPR TH G K C GAWHPSRV +TVARAGQ GYHHRT +
Sbjct: 276 VTKGHGFTGVVKRWGVACLPRKTHRGLR-KVACIGAWHPSRVMYTVARAGQHGYHHRTHL 334
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NKKIY++G+ + + N A+T YDL+ K+ITPMGGF YG V ND+VM+KG GP
Sbjct: 335 NKKIYQLGRAVSMEP-----NQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGP 389
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
++R+ITLR+ + T R EKI LKFIDTSSK GHGRFQT +K+ + G LKKDRIR E
Sbjct: 390 RRRVITLRRPMAPQTSRKLTEKITLKFIDTSSKIGHGRFQTKKEKSQWYGPLKKDRIRRE 449
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 186 bits (454), Expect = 5e-46
Identities = 97/174 (55%), Positives = 122/174 (70%)
Frame = -3
Query: 629 TKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEMN 450
TKGK YKG++S W+TKK+P TH F + C W +VA A QKG HH T +N
Sbjct: 178 TKGKHYKGISSHWYTKKVPWKTHQEFH-EAACI--WD----GLSVAWARQKGCHHCT-IN 229
Query: 449 KKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 270
KKIY+IGQG K+GK+IKNNAST+Y KSI+P+GG H G+V NDFVM+K C +G K
Sbjct: 230 KKIYKIGQGYLIKNGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGTK 286
Query: 269 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKD 108
KR+++L KSL + TK+ L+K+N KFIDT+SKFGHG FQ +K FMG LKKD
Sbjct: 287 KRVLSLCKSLLMRTKQQTLQKVNFKFIDTTSKFGHGCFQIVGEKKGFMGPLKKD 340
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 186 bits (453), Expect = 6e-46
Identities = 98/179 (54%), Positives = 119/179 (66%)
Frame = -3
Query: 629 TKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEMN 450
TKG GYKGVT + P G C GAWHP+RV+F+VA+ GQKGYHH + N
Sbjct: 203 TKGNGYKGVTRVDIQRNCPERPIEGCPKL--CVGAWHPARVTFSVAQVGQKGYHHNGD-N 259
Query: 449 KKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 270
KKI +IGQG KDGK+IKNNA TEY LS+KSI +GGF HYGEV NDF+ +KGC + K
Sbjct: 260 KKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLKGCAVRTK 319
Query: 269 KRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
K +T+ K L V T + AL+KI+ K DT+ K GHG FQT K AF+G LKK+ EE
Sbjct: 320 KH-LTICKYLLVQTIQWALKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLKKECTAEE 377
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 162 bits (394), Expect = 9e-39
Identities = 83/169 (49%), Positives = 109/169 (64%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
+TKG G KGV SRW +LPR TH G K C G W PSRV++T++RAGQKGYH RT
Sbjct: 204 ITKGHGTKGVVSRWGITRLPRKTHRGLR-KVACIGPWTPSRVAWTISRAGQKGYHKRTLF 262
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NKKIY+IG +++ N+ S D KS+ MGGF +G +NND+++IKG G
Sbjct: 263 NKKIYKIGS---EENFSYYSNSLS---DSIVKSVNCMGGFKKFGFINNDYLIIKGSMTGS 316
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 126
KR I LRK+++ EKI LK++DTSSK GHGR+++ ADK + M
Sbjct: 317 SKRPILLRKNIKNKISSVITEKIILKYVDTSSKRGHGRYESSADKFSKM 365
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 116 bits (280), Expect = 6e-25
Identities = 64/153 (41%), Positives = 89/153 (58%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKGKG +G RW K G K G WHP+RV +TV AGQ G+HHRTE+
Sbjct: 224 VTKGKGTQGPVKRWGIKLRAHKDSKG-RRKVGSIGPWHPARVMWTVPMAGQMGFHHRTEL 282
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NK++ IG+ +GK +K + +TE + ITP GGFPHYG V +DF+MI G G
Sbjct: 283 NKRLIAIGE-----NGK-LKLDENTEIE-----ITPKGGFPHYGIVRSDFMMIAGSVPGA 331
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSK 174
KRII +R ++R K+ +++ + ++ SK
Sbjct: 332 IKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
Ribosomal protein L3 - Mus musculus (Mouse)
Length = 67
Score = 113 bits (273), Expect = 4e-24
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = -3
Query: 407 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 228
GK+IKNNAST+YDLS+KSI P+GGF HYGEV NDF+M+KGC +G KKR++TLRKSL V T
Sbjct: 1 GKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQT 60
Query: 227 KRAALEK 207
KR ALEK
Sbjct: 61 KRRALEK 67
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 97.5 bits (232), Expect = 4e-19
Identities = 57/156 (36%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTK-KLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTE 456
VTKGKG++G RW K + + G G W P V ++V GQ GYH RTE
Sbjct: 201 VTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTE 260
Query: 455 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 276
NK+I +IG NN ITP GGF HYG + N++V++KG G
Sbjct: 261 YNKRILKIG------------NNGD--------EITPKGGFLHYGVIRNNYVVLKGSVQG 300
Query: 275 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 168
P KR+I LR+++R + ++ + +I T+SK G
Sbjct: 301 PAKRLIVLRRAIR--PQEPLIKVPEITYISTTSKQG 334
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 89.0 bits (211), Expect = 1e-16
Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXK-FPCXGAWHPSRVSFTVARAGQKGYHHRTE 456
+TKGKG++GV RW R T + G PSRV +TV AGQ GYH RTE
Sbjct: 207 ITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTE 266
Query: 455 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 276
NK+I +IG+ DG + +TP GGF +YG V D++MI G G
Sbjct: 267 HNKRILKIGE-----DG---------------EEVTPRGGFVNYGVVRGDYIMIHGTVPG 306
Query: 275 PKKRIITLRKSLR 237
PKKR+I +R ++R
Sbjct: 307 PKKRLIRVRPAVR 319
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 87.0 bits (206), Expect = 5e-16
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLP-RXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTE 456
+TKGKG +G RW +K + G+ + G W+PSRV TV + GQ GYH RTE
Sbjct: 203 ITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTE 262
Query: 455 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 276
+NK++ I G TP GGFP+YGEV+ + ++KG G
Sbjct: 263 LNKRLIDINDG---------------------DEPTPDGGFPNYGEVDGPYTLVKGSVPG 301
Query: 275 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 168
P++R++ R ++R + + L+ ++++ T+S G
Sbjct: 302 PEQRLVRFRPAVRPN-ESPRLDP-EVRYVSTASNQG 335
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 86.2 bits (204), Expect = 9e-16
Identities = 54/155 (34%), Positives = 78/155 (50%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
+TKGKG++GV R+ K L + G + V T+ +AGQ GYH RTE+
Sbjct: 226 ITKGKGWQGVIKRFGVKLLSHKNSKR-RRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTEL 284
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NK+I RI E +TP GGF HYGEV N +++++G GP
Sbjct: 285 NKRILRISNP-------------------GESDVTPAGGFLHYGEVTNPYMVLEGSLPGP 325
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 168
KR++ R +R HT + ++L ++ TSSK G
Sbjct: 326 AKRLLRFRDPVRPHTN---VFDVDLTYVSTSSKQG 357
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 86.2 bits (204), Expect = 9e-16
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRX-THXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTE 456
+TKG G +G RW R G G W+P R+ + V + GQ GYH RTE
Sbjct: 204 ITKGYGTQGPVVRWGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTE 263
Query: 455 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 276
NK+I ++G D +E+ ITP GGF HYG + ND++M+KG G
Sbjct: 264 YNKRILKMG-------------------DKAEE-ITPAGGFLHYGLIRNDYIMLKGSIPG 303
Query: 275 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 168
P KR++ +R ++R K + + ++ T SK G
Sbjct: 304 PVKRMVRIRPAVR--PKNMPKQAPEITYLSTQSKMG 337
>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L3 (L4) - Macaca
mulatta
Length = 153
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -3
Query: 281 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRI 102
+G KK+++TL KS V TK ALEKI+LKFIDT+SKFGHGRFQT +K AFMG LKKD+
Sbjct: 88 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLKKDQT 147
Query: 101 REE 93
+E
Sbjct: 148 AKE 150
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 80.2 bits (189), Expect = 6e-14
Identities = 55/155 (35%), Positives = 72/155 (46%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKGKG+ G R+ K LPR G WHP V TV +AGQ GY RT
Sbjct: 197 VTKGKGFTGHVQRFGVKLLPRKNRK-HRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTIS 255
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
N ++ + +G +A T I GGF HYG V ND+V++ G GP
Sbjct: 256 NVRVLKYSKG----------EDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGP 297
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 168
KR+I +R R K ++ + L +I SK G
Sbjct: 298 AKRLIKMRDPAR--QKVPDIDNVKLDYISLESKQG 330
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 77.8 bits (183), Expect = 3e-13
Identities = 56/155 (36%), Positives = 75/155 (48%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKG G +GV R+ K L + G + V T+ +AGQ GYH RTE
Sbjct: 206 VTKGYGNQGVVRRFGVKLLSHKNSKR-RRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEY 264
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NK+I RI A E E ITP GGF HYGEV N +++I+G GP
Sbjct: 265 NKRILRI---------------AGEE----ESQITPAGGFLHYGEVKNHYMIIQGSLPGP 305
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 168
KR+I R + R R +++ ++ T+SK G
Sbjct: 306 AKRLIRFRDAAR---PRREQPPVDITYVSTASKQG 337
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 77.4 bits (182), Expect = 4e-13
Identities = 47/132 (35%), Positives = 68/132 (51%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
+TKGKG++GV RW+ KK + + G P V +TV RAGQ G+H R E
Sbjct: 202 ITKGKGWQGVLKRWNVKKKQHKSRKTVR-EVGSLGPISPQSVMYTVPRAGQFGFHQRVEY 260
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
+K+I +G +T+ D + I P GGF H+G V DF+++KG G
Sbjct: 261 DKRIMIMG---------------NTDDD--KLKINPDGGFKHFGLVKGDFIVLKGSVPGA 303
Query: 272 KKRIITLRKSLR 237
+R+I LR +R
Sbjct: 304 YRRLIKLRSQIR 315
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 75.4 bits (177), Expect = 2e-12
Identities = 50/153 (32%), Positives = 77/153 (50%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKGKG++GV R+H + + G K G+ P R+ TV GQ GYH RTE
Sbjct: 194 VTKGKGFQGVIKRFHVHRRQHKSEKGVR-KVGAIGSRGPGRIFPTVPMPGQMGYHRRTEY 252
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NK I +IG+ ++ + GG+ YG+V +++KG GP
Sbjct: 253 NKLIIKIGEPLNVE-----------------------GGWVRYGQVIGPTILLKGSVPGP 289
Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSK 174
+KR+I LR+++R K+ +E +++I S K
Sbjct: 290 RKRLIILREAIRPPRKQEKVE--GIEYISLSPK 320
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 74.1 bits (174), Expect = 4e-12
Identities = 45/143 (31%), Positives = 69/143 (48%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
+TKGKG++GV R K+ + + G P V +TV RAGQ G+H R E
Sbjct: 200 ITKGKGWQGVIQRMGAKRKQHKSRKTVR-ELGSLGPISPQNVMYTVPRAGQMGFHQRIEY 258
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NK+I +G G+ + +I P GG+ H+G V D++++KG G
Sbjct: 259 NKRIMAVGSA-----GE-------------DDAINPSGGYKHFGMVKGDYIVLKGSVPGT 300
Query: 272 KKRIITLRKSLRVHTKRAALEKI 204
+R++ LR +R KR + I
Sbjct: 301 YRRLVKLRAQIRNAPKRTSKPNI 323
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 72.9 bits (171), Expect = 9e-12
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRX-THXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTE 456
VTKGKG++G R+ +++PR H + G P+ + F GQ G+H RTE
Sbjct: 199 VTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTE 257
Query: 455 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 276
NK+I ++G D + S K I P GG+PHYG V + F++++G G
Sbjct: 258 YNKRILKVG------DAE------------SLKEINPPGGWPHYGLVRSQFIIVEGSVPG 299
Query: 275 PKKRIITLRKSLR 237
KR++ LR ++R
Sbjct: 300 AVKRLVRLRHAIR 312
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 72.1 bits (169), Expect = 2e-11
Identities = 52/157 (33%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKGKG++GV RW K+LPR H H + +AGQ G+H RTE
Sbjct: 208 VTKGKGFQGVIKRWGVKELPRW-HKHRKGSRRIGARSHGRSTFWETPQAGQTGFHRRTEY 266
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NK+I I +K +TP GGF YG V + FVM+ G G
Sbjct: 267 NKRILMIDDDGYK--------------------VTPAGGFLRYGVVRSTFVMLSGSIPGT 306
Query: 272 KKRIITLRKSLRVHT--KRAALEKINLKFIDTSSKFG 168
KR I +R ++R + + K + +I +SK G
Sbjct: 307 PKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 67.7 bits (158), Expect = 4e-10
Identities = 49/133 (36%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRX-THXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTE 456
VTKGKG+ GV R+ +LPR H K G S+T + GQ G+H RTE
Sbjct: 220 VTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTE 277
Query: 455 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 276
NK+I +IG K I P GGF YG V N +V+++G +G
Sbjct: 278 YNKRIIKIGD--------------------EPKEINPAGGFVRYGIVRNTYVLLEGSILG 317
Query: 275 PKKRIITLRKSLR 237
KKR I LR+ +R
Sbjct: 318 SKKRPIFLREPVR 330
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 67.3 bits (157), Expect = 5e-10
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPR-XTHXGFXXKFPCXGAWHPSRVSFT-VARAGQKGYHHRT 459
VTKGKG++GV R+ K+LPR H K G+ P + + + GQ G+H RT
Sbjct: 262 VTKGKGFQGVIKRFGVKELPRWHKHRKGSRKI---GSRSPGFGTMSETPQPGQMGFHRRT 318
Query: 458 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCM 279
E NK+I +IG ++ +TP GGF YG V ++M+ G +
Sbjct: 319 EYNKRIIKIG--------------------INGWEVTPKGGFLGYGIVYGPYIMLHGSII 358
Query: 278 GPKKRIITLRKSLR 237
GP+KR++ LR +R
Sbjct: 359 GPRKRLLVLRHPIR 372
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 62.5 bits (145), Expect = 1e-08
Identities = 43/132 (32%), Positives = 62/132 (46%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
VTKGKG++GV R+ K+LP+ + +W S+ V + GQ GYH RT+
Sbjct: 225 VTKGKGFQGVIKRFGVKELPKWHKHRKGSRRVGARSWGKGTSSY-VPQPGQMGYHRRTDY 283
Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
NK++ I K I GG+ HYG V + +V++KG GP
Sbjct: 284 NKRVLMISDDPSK--------------------INVEGGWLHYGLVKSKYVVLKGSVFGP 323
Query: 272 KKRIITLRKSLR 237
KR I +R +R
Sbjct: 324 PKRPIIMRLPVR 335
>UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-12
- Homo sapiens (Human)
Length = 103
Score = 35.5 bits (78), Expect = 1.7
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -1
Query: 241 CVCIQRGLH*KRSTSNSLTPRPSSVMVDSRRRLTRLHSWVH 119
C C + G +R T +SLTP PS M SR R HSW H
Sbjct: 63 CWCRRSGGLWRRLTLSSLTPPPSLAMAASRPWRRRKHSWDH 103
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 35.1 bits (77), Expect = 2.3
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2
Query: 635 NAVNHFILGKHRIDRDRFLQMFSGPFHF 718
N +NHFIL ++R++R+ F ++F GP +F
Sbjct: 57 NDINHFILFENRVNRNFFFKVFFGPVNF 84
>UniRef50_Q3EAU8 Cluster: Uncharacterized protein At3g31410.1; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g31410.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 315
Score = 34.7 bits (76), Expect = 3.0
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = -1
Query: 736 GVPXEXKVKWAREHLEKPIPVDSVFAQ---DEMIDCIVSPRAKD 614
G P KVK+ + HL K +D+++A+ ++IDCIV+PR ++
Sbjct: 232 GCPRMCKVKFKKNHL-KGFTLDTIYAELGTTQVIDCIVTPRIEE 274
>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1482
Score = 34.7 bits (76), Expect = 3.0
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +3
Query: 252 KSNDTLFRSHAATLDHHKVVVYFTIMGETSHWCNGFLRQVILSRCIVFNNFAILFVDSLS 431
+ N+ + TL H ++ YF + +SH ++I + +++NNFA +F+ L
Sbjct: 450 QKNNIKYNIKWLTLFFHSLIQYFVYLNNSSHILINHKDKIIFIKHLLYNNFAQMFLKYL- 508
Query: 432 NTIDFLVHFSTVMITFLTST 491
D V+F+ + I + S+
Sbjct: 509 --CDNYVYFTPINILSIYSS 526
>UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 685
Score = 34.7 bits (76), Expect = 3.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -3
Query: 440 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 261
YR G H DG + NNA++++ +K +P F GE + ++ G + K
Sbjct: 567 YRSSWGYHGDDGAIFLNNANSDFSYYKKE-SPSDDFGAKGEFGANDIVGVGLNLETGKGF 625
Query: 260 ITLRKSLR 237
+TL +LR
Sbjct: 626 VTLNGNLR 633
>UniRef50_Q3EAT8 Cluster: Uncharacterized protein At3g32140.1; n=6;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g32140.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 174
Score = 34.3 bits (75), Expect = 4.0
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = -1
Query: 736 GVPXEXKVKWAREHLEKPIPVDSVFAQ---DEMIDCIVSPRAKDTKV 605
G P KVK+ + HL K +D+++A+ +IDCIV+PR ++ ++
Sbjct: 79 GCPRMCKVKFKKNHL-KGFTLDTIYAELGTTHVIDCIVTPRIEEQEL 124
>UniRef50_Q30V20 Cluster: ATPase; n=1; Desulfovibrio desulfuricans
G20|Rep: ATPase - Desulfovibrio desulfuricans (strain
G20)
Length = 603
Score = 33.5 bits (73), Expect = 7.0
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -1
Query: 646 IDCIVSPRAKDTKVSLLVGTQRSYPVRHTQGXXGNFPAXELGILLGCRSL*LVLVR 479
I C+ + T ++G++R P+RH G A EL I+L C L LVL +
Sbjct: 42 IACVALFASASTAPESILGSERLAPLRHAAGAAFPASATELLIILSCVMLLLVLAK 97
>UniRef50_A6BE46 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 152
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 309 VVYFTIMGETSHWCNGFLRQVILSRCIVF 395
+++FT GE HW + FLRQV+ RC +F
Sbjct: 41 MMFFTYQGELVHWQDDFLRQVL--RCSIF 67
>UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 587
Score = 33.5 bits (73), Expect = 7.0
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -3
Query: 482 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 303
++ H E++K +G+GI+ + + N S YD S GF + N F
Sbjct: 140 EQNIHLVAEISKSRPYVGEGIYVEYRLYVSENVSV-YDTSVTEAPQYNGFWNQEIKINGF 198
Query: 302 VMIKGCCMGPKKRIITLRKSLRVHTKRAAL 213
+ G G R I L+K+L + TK L
Sbjct: 199 PVKMGKYNGENYRYIVLQKALLIPTKTGRL 228
>UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
tetani
Length = 209
Score = 33.5 bits (73), Expect = 7.0
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -3
Query: 629 TKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXG-AWHPSRVSFTVARAGQKGYHHRTEM 453
+KGKGY+G+ RW+ + P F G A +P+R AG G T +
Sbjct: 114 SKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVL 173
Query: 452 NKKIYR 435
N ++ +
Sbjct: 174 NLEVVK 179
>UniRef50_Q8XHS3 Cluster: 50S ribosomal protein L3; n=7;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
perfringens
Length = 209
Score = 33.5 bits (73), Expect = 7.0
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFP--CXGAWHPSRVSFTVARAGQKGYHHRT 459
V+KGKG++G RW+ + P +H + P A PSR G G + T
Sbjct: 113 VSKGKGFQGTIKRWNASRGP-MSHGSKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTT 171
Query: 458 EMNKKIYRI 432
+N ++ +I
Sbjct: 172 VLNLEVVKI 180
>UniRef50_Q8IKJ3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 93
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 3 FFFFFALSNVYFHGRHLRLRSSRWGCGSRSFFA 101
FFFFF + N YF+ L L ++ GCG FA
Sbjct: 20 FFFFFVVYNDYFNEPELPLDENKKGCGQFKCFA 52
>UniRef50_Q1E829 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1828
Score = 33.1 bits (72), Expect = 9.2
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 493 ATVNDTLEGCQAPMQGNFXXNPXCVXRGSFFVCQREVTPLYPLPLVTQC 639
A + DT CQA + G+ C R F V QR+ T PL L C
Sbjct: 504 AYIGDTARLCQAIVDGDLECVKKCCAREDFNVDQRDHTGRMPLHLAVMC 552
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 33.1 bits (72), Expect = 9.2
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -3
Query: 320 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLK 195
++ N+ +++KG GPK + ++ +++ R A+E +N+K
Sbjct: 181 DIKNNILLVKGSVPGPKNCFLIIKSAIKNLPSREAIELVNIK 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,354,023
Number of Sequences: 1657284
Number of extensions: 15488024
Number of successful extensions: 37104
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 35994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37066
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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