Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_A05
         (859 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   332   5e-91
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   332   5e-91
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   332   5e-91
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   332   5e-91
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   332   5e-91

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  332 bits (815), Expect = 5e-91
 Identities = 153/180 (85%), Positives = 162/180 (90%)
 Frame = -3

Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
           VTKGKG+KGVTSRWHTKKLPR TH G   K  C GAWHPSRVS TVARAGQKGYHHRTE+
Sbjct: 233 VTKGKGFKGVTSRWHTKKLPRKTHKGLR-KVACIGAWHPSRVSTTVARAGQKGYHHRTEI 291

Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
           NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G 
Sbjct: 292 NKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGS 351

Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 352 KKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -1

Query: 742 LXGVPXEXKVKWAREHLEKPIPVDSVFAQDEMIDCIVSPRAKDTK 608
           L G   E KVKWAREHLEKPI V +VF QDEMIDC+   + K  K
Sbjct: 196 LNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFK 240


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  332 bits (815), Expect = 5e-91
 Identities = 153/180 (85%), Positives = 162/180 (90%)
 Frame = -3

Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
           VTKGKG+KGVTSRWHTKKLPR TH G   K  C GAWHPSRVS TVARAGQKGYHHRTE+
Sbjct: 222 VTKGKGFKGVTSRWHTKKLPRKTHKGLR-KVACIGAWHPSRVSTTVARAGQKGYHHRTEI 280

Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
           NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G 
Sbjct: 281 NKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGS 340

Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 341 KKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -1

Query: 742 LXGVPXEXKVKWAREHLEKPIPVDSVFAQDEMIDCIVSPRAKDTK 608
           L G   E KVKWAREHLEKPI V +VF QDEMIDC+   + K  K
Sbjct: 185 LNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFK 229


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  332 bits (815), Expect = 5e-91
 Identities = 153/180 (85%), Positives = 162/180 (90%)
 Frame = -3

Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
           VTKGKG+KGVTSRWHTKKLPR TH G   K  C GAWHPSRVS TVARAGQKGYHHRTE+
Sbjct: 209 VTKGKGFKGVTSRWHTKKLPRKTHKGLR-KVACIGAWHPSRVSTTVARAGQKGYHHRTEI 267

Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
           NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G 
Sbjct: 268 NKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGS 327

Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 328 KKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -1

Query: 742 LXGVPXEXKVKWAREHLEKPIPVDSVFAQDEMIDCIVSPRAKDTK 608
           L G   E KVKWAREHLEKPI V +VF QDEMIDC+   + K  K
Sbjct: 172 LNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFK 216


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  332 bits (815), Expect = 5e-91
 Identities = 153/180 (85%), Positives = 162/180 (90%)
 Frame = -3

Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
           VTKGKG+KGVTSRWHTKKLPR TH G   K  C GAWHPSRVS TVARAGQKGYHHRTE+
Sbjct: 209 VTKGKGFKGVTSRWHTKKLPRKTHKGLR-KVACIGAWHPSRVSTTVARAGQKGYHHRTEI 267

Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
           NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G 
Sbjct: 268 NKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGS 327

Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 328 KKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -1

Query: 742 LXGVPXEXKVKWAREHLEKPIPVDSVFAQDEMIDCIVSPRAKDTK 608
           L G   E KVKWAREHLEKPI V +VF QDEMIDC+   + K  K
Sbjct: 172 LNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFK 216


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  332 bits (815), Expect = 5e-91
 Identities = 153/180 (85%), Positives = 162/180 (90%)
 Frame = -3

Query: 632 VTKGKGYKGVTSRWHTKKLPRXTHXGFXXKFPCXGAWHPSRVSFTVARAGQKGYHHRTEM 453
           VTKGKG+KGVTSRWHTKKLPR TH G   K  C GAWHPSRVS TVARAGQKGYHHRTE+
Sbjct: 222 VTKGKGFKGVTSRWHTKKLPRKTHKGLR-KVACIGAWHPSRVSTTVARAGQKGYHHRTEI 280

Query: 452 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 273
           NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G 
Sbjct: 281 NKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGS 340

Query: 272 KKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
           KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 341 KKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -1

Query: 742 LXGVPXEXKVKWAREHLEKPIPVDSVFAQDEMIDCIVSPRAKDTK 608
           L G   E KVKWAREHLEKPI V +VF QDEMIDC+   + K  K
Sbjct: 185 LNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFK 229


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,786,592
Number of Sequences: 53049
Number of extensions: 737145
Number of successful extensions: 1982
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)