Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_A02
         (805 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21990-1|AAA60301.1|  464|Homo sapiens spiceosomal protein protein.    30   8.5  
BC015804-1|AAH15804.1|  481|Homo sapiens SF3A2 protein protein.        30   8.5  
BC009903-1|AAH09903.1|  464|Homo sapiens splicing factor 3a, sub...    30   8.5  
BC004434-1|AAH04434.1|  464|Homo sapiens splicing factor 3a, sub...    30   8.5  
AC005263-1|AAC25613.1|  464|Homo sapiens SP62_HUMAN protein.           30   8.5  

>L21990-1|AAA60301.1|  464|Homo sapiens spiceosomal protein protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = -2

Query: 720 PXXSSHPPXXXRXHQPD--HQIPDSIHQPPQX*HPXX--INPLTPX*KEFAPGLKPPLSS 553
           P    HP       QP   H     +H  P   HP    ++P TP      P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451

Query: 552 EAP 544
           E P
Sbjct: 452 EGP 454


>BC015804-1|AAH15804.1|  481|Homo sapiens SF3A2 protein protein.
          Length = 481

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = -2

Query: 720 PXXSSHPPXXXRXHQPD--HQIPDSIHQPPQX*HPXX--INPLTPX*KEFAPGLKPPLSS 553
           P    HP       QP   H     +H  P   HP    ++P TP      P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451

Query: 552 EAP 544
           E P
Sbjct: 452 EGP 454


>BC009903-1|AAH09903.1|  464|Homo sapiens splicing factor 3a,
           subunit 2, 66kDa protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = -2

Query: 720 PXXSSHPPXXXRXHQPD--HQIPDSIHQPPQX*HPXX--INPLTPX*KEFAPGLKPPLSS 553
           P    HP       QP   H     +H  P   HP    ++P TP      P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451

Query: 552 EAP 544
           E P
Sbjct: 452 EGP 454


>BC004434-1|AAH04434.1|  464|Homo sapiens splicing factor 3a,
           subunit 2, 66kDa protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = -2

Query: 720 PXXSSHPPXXXRXHQPD--HQIPDSIHQPPQX*HPXX--INPLTPX*KEFAPGLKPPLSS 553
           P    HP       QP   H     +H  P   HP    ++P TP      P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451

Query: 552 EAP 544
           E P
Sbjct: 452 EGP 454


>AC005263-1|AAC25613.1|  464|Homo sapiens SP62_HUMAN protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = -2

Query: 720 PXXSSHPPXXXRXHQPD--HQIPDSIHQPPQX*HPXX--INPLTPX*KEFAPGLKPPLSS 553
           P    HP       QP   H     +H  P   HP    ++P TP      P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451

Query: 552 EAP 544
           E P
Sbjct: 452 EGP 454


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,950,752
Number of Sequences: 237096
Number of extensions: 2053435
Number of successful extensions: 4393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4392
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)