Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A02
(805 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47170.1 68416.m05122 transferase family protein low similari... 35 0.073
At3g24550.1 68416.m03083 protein kinase family protein contains ... 34 0.13
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 33 0.22
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 32 0.51
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro... 31 0.68
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 30 1.6
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 30 2.1
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 30 2.1
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 29 2.7
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 2.7
At2g42460.1 68415.m05253 meprin and TRAF homology domain-contain... 29 2.7
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 29 3.6
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 3.6
At4g20200.1 68417.m02953 terpene synthase/cyclase family protein... 29 4.8
At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /... 28 6.3
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 28 8.3
>At3g47170.1 68416.m05122 transferase family protein low similarity
to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus
cuspidata GI:6746554; contains Pfam profile PF02458
transferase family
Length = 468
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -3
Query: 470 NHKLRALLVVIPRILRSPP-PTHPLIEDVVMATNQAIIDYK-VKIADNNLVTHKELALKV 297
N K LV + + SP PT ++ +++ T++ I K + I D NL KE +K+
Sbjct: 222 NDKNNPKLVDVEKDCSSPDTPTEDMVREILNITSEDITKLKNIIIEDENLTNEKEKNMKI 281
Query: 296 SSIIGTRVYVFDPSC 252
+++ YV+ C
Sbjct: 282 TTVEVLAAYVWRARC 296
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 720 PXXSSHPPXXXRXHQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAPG-LKPPLSSEAP 544
P SS PP P +S PP P + P +P PG L PPL +P
Sbjct: 29 PAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSP------PGSLTPPLPQPSP 82
Query: 543 SAYLTPS 523
SA +TPS
Sbjct: 83 SAPITPS 89
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Frame = -2
Query: 720 PXXSSHPPXXXRXHQPDHQIPDSIHQPPQX*H-PXXINPL-TPX*KEFAPGLKPPLSSEA 547
P S PP P + P +H PP H P P+ +P +P PP+ S
Sbjct: 563 PPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPP 622
Query: 546 PSAYLTPSSLGMXKGVSPP 490
P + P S SPP
Sbjct: 623 PPVFSPPPSQSPPVVYSPP 641
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -2
Query: 681 HQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAP-GLKPPLSSEAPSAYLTPSSLGMXK 505
+ P HQ+P S H P HP + P + P G PP S P ++ P S+GM
Sbjct: 589 NMPHHQLPPSSHMPL---HPHHL----PRPMQMPPHGHMPPPS--MPMSHQMPGSMGMQG 639
Query: 504 GVSPPYFQ 481
G++P Q
Sbjct: 640 GMNPQMSQ 647
>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
Interpro entry IPR000379
Length = 309
Score = 31.5 bits (68), Expect = 0.68
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = -3
Query: 272 YVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQ-LVDPRHVSS 96
+V S Y+ T PF T + N+R +K+N+ + A PS I Q +V P +
Sbjct: 10 FVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRIVIPNRHNE 69
Query: 95 DSFGVYVKS*S--LILHCFGLLVSSRSNK 15
G+ ++ S +++ C G S++SN+
Sbjct: 70 KLVGLLHETGSTDIVVLCHGFR-SNKSNQ 97
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/65 (27%), Positives = 24/65 (36%)
Frame = -2
Query: 720 PXXSSHPPXXXRXHQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAPGLKPPLSSEAPS 541
P S PP P H P +H PP H +P ++P PP+ S P
Sbjct: 540 PPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPP-PPPVHSPPPP 598
Query: 540 AYLTP 526
+ P
Sbjct: 599 VHSPP 603
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Frame = -2
Query: 702 PPXXXRXHQPDHQIPDSIHQ-----PPQX*HPXXINPLTPX*KEFAPGLKPPLSSEAPSA 538
PP HQP +Q P Q PPQ HP NP P + PP P +
Sbjct: 317 PPPTQSLHQPPYQPPPQQPQYPQQPPPQLQHPSGYNPEEP---PYPQQSYPPNPPRQPPS 373
Query: 537 YLTPSS 520
+ P S
Sbjct: 374 HPPPGS 379
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 588 EFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
++AP KP + S P Y TPS K PPY
Sbjct: 44 KYAPHPKPYVKSSPPPQYYTPSPKVNYKSPPPPY 77
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = -2
Query: 720 PXXSSHPPXXXRXHQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAPGLKPPLSSEAP 544
P +PP + P+H P PPQ +P I P K P K P + P
Sbjct: 141 PPPEQYPPPIKKYPPPEHYPPPIKKYPPQEQYPPPIKKYPPPEKYPPPIKKYPPPEQYP 199
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/77 (25%), Positives = 25/77 (32%)
Frame = -2
Query: 720 PXXSSHPPXXXRXHQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAPGLKPPLSSEAPS 541
P S PP P H P +H PP H +P +P PP+ S P
Sbjct: 680 PVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSP--PPPVQSPPPP 737
Query: 540 AYLTPSSLGMXKGVSPP 490
+P PP
Sbjct: 738 PVFSPPPPAPIYSPPPP 754
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/65 (26%), Positives = 22/65 (33%)
Frame = -2
Query: 720 PXXSSHPPXXXRXHQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAPGLKPPLSSEAPS 541
P S PP P H P +H PP H +P +P P+ S P
Sbjct: 755 PVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPSPIYSPPPP 814
Query: 540 AYLTP 526
+ P
Sbjct: 815 VFSPP 819
>At2g42460.1 68415.m05253 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 441
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 443 VIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKEL 309
V P++L PL E+ + N+ II +VK+A+ +T KE+
Sbjct: 273 VEPKMLSFKDYASPLQEEGFLENNKLIIRVEVKVAEEGYLTGKEM 317
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 588 EFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 487
++AP KP + S P Y TPS K PPY
Sbjct: 50 KYAPHPKPYVYSSPPPPYYTPSPKVNYKSPPPPY 83
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 290 IIGTRVYVFDPSCYFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYRQLVD 114
+I TR + + TP FD + N+ +V+ N+TA+++ I + PS I+ LVD
Sbjct: 104 LIRTRFMYGNYDGFSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At4g20200.1 68417.m02953 terpene synthase/cyclase family protein
5-epi-aristolochene synthase, Nicotiana tabacum,
PATX:G505588
Length = 604
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 135 LGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRS*KVARGIEDVDSGAY 287
L G S+ + K +F LK+RP +V I+GR G ED S Y
Sbjct: 464 LAGIFMSMGKMATKEAFEWLKSRPKLVQYLSIKGRLMNDLMGYEDDMSRGY 514
>At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 354
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 699 PXXXRXHQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAPGLKPPL 559
P H D Q P S++ PQ P I+P TP + AP +PPL
Sbjct: 292 PITCSFHTEDSQ-PASLN--PQPSAPYAISPTTPHTQPHAPTTQPPL 335
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/77 (29%), Positives = 30/77 (38%)
Frame = -2
Query: 720 PXXSSHPPXXXRXHQPDHQIPDSIHQPPQX*HPXXINPLTPX*KEFAPGLKPPLSSEAPS 541
P PP R P P + PP P I P+ P PGL PP+++ P
Sbjct: 95 PPVVVRPPPIIRP-PPVVYPPPIVRPPPITRPPIIIPPIQPPPVTTPPGLLPPITT--PP 151
Query: 540 AYLTPSSLGMXKGVSPP 490
L P + G+ PP
Sbjct: 152 GLLPP--VTTPPGLLPP 166
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,111,818
Number of Sequences: 28952
Number of extensions: 306738
Number of successful extensions: 1040
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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