Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A01
(1182 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 39 0.007
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.027
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 36 0.083
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 33 0.44
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.59
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 31 1.8
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 31 2.4
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 30 3.1
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 30 4.1
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 7.2
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 7.2
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 39.1 bits (87), Expect = 0.007
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P S PP P PP P P PPP PP P P P PP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 36.3 bits (80), Expect = 0.048
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P PP P PP P P PPP PP P P P PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 35.9 bits (79), Expect = 0.063
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P PP P PP P P PPP PP P P P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 35.9 bits (79), Expect = 0.063
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P PPS P PP P P PPP PP P A P P PP
Sbjct: 379 PPPPPPPPPSPPPP----PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 199 SXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
S PP P PP P P PPP P P P P PP
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 37.1 bits (82), Expect = 0.027
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -3
Query: 244 GXXGGGXLXXPXPXRSXPPSXPRXLX-LXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVF 68
G GGG + P P + PPS P PP P PPP P P
Sbjct: 337 GTSGGGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPP 396
Query: 67 PXXPLXVPP 41
P P PP
Sbjct: 397 PPPPTNGPP 405
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P + PP P PP P PPP P P P P PP
Sbjct: 358 PPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 415
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 35.5 bits (78), Expect = 0.083
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSV-----FPXXPLX 50
P PP PR PP P P PP PP PR A + P P
Sbjct: 198 PSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPT 257
Query: 49 VPPXXL 32
+PP L
Sbjct: 258 LPPPTL 263
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -3
Query: 190 PSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPR 89
P+ P + PP P P PPP P PR
Sbjct: 195 PTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPR 228
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -3
Query: 208 PXRSXPPSXPRXLXLXXXPPSXPX---PRXXPPPAXPPXVXPRXXAXSVFPXXPLXVP 44
P R+ PP P PP P PR PPP PP PR +FP P
Sbjct: 176 PPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPI-PPIDPPRTQPPPIFPQPTTPAP 232
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -3
Query: 208 PXRSXPPSXPRXLXLXXXPPSXPX--PRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P PP P PP P PR PPP PP PR + P P P
Sbjct: 164 PRTQPPPIFPIDPPRTQPPPIPPIDPPRTQPPPI-PPIDPPRTQPPPIPPIDPPRTQP 220
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.1 bits (72), Expect = 0.44
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPR-XXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P PP+ P PP P P PPP PP P P P PP
Sbjct: 157 PPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P PPS PP P P PPP PP P P P PP
Sbjct: 134 PPPNAPYPPSPNAPYPPPPNPP-YPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPP 190
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXX-PPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P PP P PP P P PPP PP P P P PP
Sbjct: 96 PPPYPPYPPPPP--YPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPP 152
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = -3
Query: 214 PXPXRS--XPPSXPRXLXLXXXPPSXPXPR-XXPPPAXPPXVXPRXXAXSVFPXXPLXVP 44
P P PP+ P L PP+ P P PPP PP P P P P
Sbjct: 142 PSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPP---PNPPYPPP 198
Query: 43 P 41
P
Sbjct: 199 P 199
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXX-PPPAXPPXVXPRXXAXSVFPXXP 56
P P PP+ P PP P P PPP PP P +P P
Sbjct: 175 PPPPYPPPPNPP--YPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 32.7 bits (71), Expect = 0.59
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +3
Query: 36 KXGGTXRGXXGKTXXAXXRGXTXGGXAGGGXXRGXGXX-GGXXXRXRXRGXEGGXXRKGX 212
+ GG RG G RG G AGGG RG G GG RG GG G
Sbjct: 120 RRGGVQRGGRGGWRG---RGGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGE 176
Query: 213 G 215
G
Sbjct: 177 G 177
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = +3
Query: 36 KXGGTXRGXXGKTXXAXXRGXTXG-----GXAGGGXXRGXGXXGGXXXRXRXRGXEGG 194
+ GG G G RG G G G G RG G GG R G GG
Sbjct: 135 RGGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGRGTGGGSRGG 192
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.9 bits (69), Expect = 1.0
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = -3
Query: 193 PPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
PPS P PP+ P PPPA PP P P PL PP
Sbjct: 54 PPSPPAAAPAAPPPPAAA-PAAPPPPAAPPAAPP--------PPPPLPAPP 95
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P S P + P P+ P P PP A PP P A P P PP
Sbjct: 51 PPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPP--PPPLPAPPPPPAQPAPQPP 106
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P + P + P L PP P PPPA PP P
Sbjct: 75 PPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPA-PPHFLP 114
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -3
Query: 244 GXXGGGXLXXPXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPP 104
G GGG P P PPS PP+ P P+ P P PP
Sbjct: 422 GPPGGGVPSHPPPLPQPPPSI-------IPPPTTPLPQTVPTPPRPP 461
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXP-PPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P R PP PR P+ P PR P PP PP + +P PL PP
Sbjct: 266 PSPLR-YPPIPPRYPPSLIRYPTLP-PRYPPSPPRYPPSPPRYPPSLHRYPQSPLRYPP 322
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXP-PPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P R PPS R L P P PR P PP PP + + +P P+ PP
Sbjct: 273 PIPPR-YPPSLIRYPTLPPRYPPSP-PRYPPSPPRYPPSLHRYPQSPLRYPPSPIRYPP 329
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
P P PP+ P PP+ P P P P P P + + P P +PP
Sbjct: 246 PMPETPLPPATPNPFI----PPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNP-YIPP 298
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXP-----PXVXPRXXAXSVFPXXP-L 53
P P PS P + PP+ P P P+ P P + P S+ P P L
Sbjct: 298 PAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPSIPPAPPNPSIPPAPPNL 357
Query: 52 XVPP 41
+PP
Sbjct: 358 FIPP 361
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 208 PXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P PPS P + PPS P P PP PP P
Sbjct: 2175 PPMGAPPSGPPPMGA---PPSGPPPMGTPPSGHPPMGAP 2210
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 193 PPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
PPS P + PPS P P PP PP P
Sbjct: 2170 PPSVPPPMGA---PPSGPPPMGAPPSGPPPMGTP 2200
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -3
Query: 193 PPSXPRXLXLXXXPPSXPXPR-XXPPPAXPPXVXPRXXA-XSVFPXXPLXVPP 41
PP P + PP+ P P P P PP + P A + P L PP
Sbjct: 285 PPMTPPPAVVTAPPPAPPLPNFTSPSPPPPPPLPPAMPAMDDLLPPEVLSPPP 337
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P ++ P P PP P P+ PP PP P
Sbjct: 675 PIPIQTMVPPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPP 715
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -3
Query: 235 GGGXLXXPXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXP 56
GG P P PS P PP P PPP P S P P
Sbjct: 927 GGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPP 986
Query: 55 LXVPP 41
PP
Sbjct: 987 PPPPP 991
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = -3
Query: 235 GGGXLXXPXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXP 56
G L P P S P P PP P PP P + P + P P
Sbjct: 928 GNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPP 987
Query: 55 LXVPP 41
PP
Sbjct: 988 PPPPP 992
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -3
Query: 229 GXLXXPXPXRSXPPSXPRXLXL-XXXPPSXPXPRXXPPPAXPPXVXPRXXAXSVFP 65
G + P P RS PS P + PP+ + PPA P P+ A P
Sbjct: 565 GAVARPQPHRSAEPSIPTPHTMQQGQPPAIQIKQQPQPPAVEPPPEPKPKAKPATP 620
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 427 PHP-RVPPPGAPHP---RFPPPGAPHPRVPPPGAPHPRVPP 463
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 437 PHP-RFPPPGAPHP---RVPPPGAPHPRVPPPGAPHPRVPP 473
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 447 PHP-RVPPPGAPHP---RVPPPGAPHPRVPPPGAPHPRVPP 483
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 457 PHP-RVPPPGAPHP---RVPPPGAPHPRVPPPGAPHPRVPP 493
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 487 PHP-RVPPPGAPHQ---RVPPPGAPHPRVPPPGAPHPRVPP 523
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 507 PHP-RVPPPGAPHP---RVPPPGAPHPRVPPPGAPHPRVPP 543
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 517 PHP-RVPPPGAPHP---RVPPPGAPHPRVPPPGAPHPRVPP 553
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 527 PHP-RVPPPGAPHP---RVPPPGAPHPRVPPPGASHPRVPP 563
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 214 PXPXRSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
P P R PP P PP P PR PP A P V P
Sbjct: 567 PHP-RVPPPGAPHP---RVPPPGTPHPRVPPPGAPHPKVPP 603
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 202 RSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
R PP P PP P PR PP A P V P
Sbjct: 420 RVRPPGAPHP---RVPPPGAPHPRFPPPGAPHPRVPP 453
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 202 RSXPPSXPRXLXLXXXPPSXPXPRXXPPPAXPPXVXP 92
R PP P PP P PR PP A P V P
Sbjct: 500 RVPPPGAPHP---RVPPPGAPHPRVPPPGAPHPRVPP 533
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 93 GXTXGGXAGGGXXRGXGXXGGXXXRXRXRGXEGGXXRKGXG 215
G GG GGG G G GG G +GG G G
Sbjct: 772 GGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDG 812
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 154 PPSXPXPRXXPPPAXPPXVXPRXXAXSVFPXXPLXVPP 41
PP P P PPP PP P P P +PP
Sbjct: 249 PPGMPPPGMMPPPGFPPMGMPGMGGMPP-PGMPPPMPP 285
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 152 PXXPXAAXPXA--PRXPPSCXPXSXRPXCFSXXAPXXXPXFXPP 27
P P ++ P + P PPS P S P S P P PP
Sbjct: 138 PTYPPSSSPSSSFPSVPPSSPPSSSSPSSSSPSVPPSSPPSSPP 181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.133 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,798,067
Number of Sequences: 59808
Number of extensions: 94639
Number of successful extensions: 1116
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3645453765
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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