Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_A01
         (1182 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    27   1.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = +3

Query: 93  GXTXGGXAGGGXXRGXGXXGGXXXRXRXRGXEGGXXRKGXG 215
           G    G  GGG   G G  GG   R R RG   G    G G
Sbjct: 58  GGGDDGYGGGGRG-GRGGRGGGRGRGRGRGGRDGGGGFGGG 97


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
 Frame = -3

Query: 229 GXLXXPXPXRSXPPSXPRXLXLXXXPPSXPXP-RXXPPPAXPPXVXP 92
           G +  P       P  PR   +   PP  P P R   PP   P + P
Sbjct: 196 GNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQP 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,350
Number of Sequences: 2352
Number of extensions: 2682
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 133660269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)