Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_P24
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   4.2  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 205  YNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKRAN 369
            YNH  E ++  V+ + IGRN  +   +N+ +A      P+  +       +KRAN
Sbjct: 1710 YNHVAESILHAVHDEPIGRNYGNG--LNIGNAGHTGEIPLRPLVLDDSSILKRAN 1762


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -1

Query: 393 LCDCCQPNICTLDM--EERCACNVGNR*SHLLASMDHIHSECVHSITTNIIPVDSRDQHL 220
           LC CC+ + C  +M     CAC   N  S  +       S   ++   N IP+D+ + ++
Sbjct: 779 LCHCCEFDACDCEMTCPNNCACYHDNSWSTNIVEC----SAAGYTDIPNNIPMDTTEVYI 834


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 943,542
Number of Sequences: 2352
Number of extensions: 21398
Number of successful extensions: 69
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)