Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P24
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 264 5e-71
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 262 2e-70
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 260 1e-69
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 125 5e-29
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 125 5e-29
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 121 6e-28
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 75 7e-14
AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, smal... 42 5e-04
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 40 0.002
U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chai... 35 0.092
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 31 1.5
U80027-19|AAC48129.2| 313|Caenorhabditis elegans F-box a protei... 28 8.0
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 8.0
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 8.0
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 264 bits (648), Expect = 5e-71
Identities = 119/143 (83%), Positives = 135/143 (94%)
Frame = +1
Query: 184 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 363
MIGGLFVYNHKGEVLISR+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR
Sbjct: 1 MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60
Query: 364 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 543
N+W+ AVT+QNVNAAMVFEFL + D MQSYFGK++EEN+KNNFVLIYELLDEILDFGY
Sbjct: 61 GNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120
Query: 544 PQNSDTGVLKTFITQQGIKSASK 612
PQN+D GVLKTFITQQG+++A+K
Sbjct: 121 PQNTDPGVLKTFITQQGVRTATK 143
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +2
Query: 611 REEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVXLLMSPQG 745
+EEQ+QITSQVTGQIGWRREGIKYRRNELFLDV+EYV LLM+ QG
Sbjct: 143 KEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMNQQG 187
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 262 bits (642), Expect = 2e-70
Identities = 118/141 (83%), Positives = 133/141 (94%)
Frame = +1
Query: 184 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 363
MIGGLFVYNHKGEVLISR+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR
Sbjct: 1 MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60
Query: 364 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 543
N+W+ AVT+QNVNAAMVFEFL + D MQSYFGK++EEN+KNNFVLIYELLDEILDFGY
Sbjct: 61 GNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120
Query: 544 PQNSDTGVLKTFITQQGIKSA 606
PQN+D GVLKTFITQQG+++A
Sbjct: 121 PQNTDPGVLKTFITQQGVRTA 141
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +2
Query: 611 REEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVXLLMSPQG 745
+EEQ+QITSQVTGQIGWRREGIKYRRNELFLDV+EYV LLM+ QG
Sbjct: 149 KEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMNQQG 193
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 260 bits (636), Expect = 1e-69
Identities = 117/141 (82%), Positives = 132/141 (93%)
Frame = +1
Query: 184 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 363
MIGGLFVYNHKGEVLISR+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR
Sbjct: 1 MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60
Query: 364 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 543
N+W+ AVT+QNVNAAMVF FL + D MQSYFGK++EEN+KNNFVLIYELLDEILDFGY
Sbjct: 61 GNVWICAVTRQNVNAAMVFAFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120
Query: 544 PQNSDTGVLKTFITQQGIKSA 606
PQN+D GVLKTFITQQG+++A
Sbjct: 121 PQNTDPGVLKTFITQQGVRTA 141
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +2
Query: 611 REEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVXLLMSPQG 745
+EEQ+QITSQVTGQIGWRREGIKYRRNELFLDV+EYV LLM+ QG
Sbjct: 149 KEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMNQQG 193
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 125 bits (301), Expect = 5e-29
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Frame = +1
Query: 196 LFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRS--PVTNIARTSFFHIKRAN 369
+F+ + KG+ +ISR YR DI A+D F ++++ +++ S PV T+F IK N
Sbjct: 6 MFILDLKGKTIISRNYRGDIDMTAIDKF-IHLLMEKEEEGSAAPVLTYQDTNFVFIKHTN 64
Query: 370 IWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQ 549
I+L + + NVN M+ FL K ++V YF + EE++++NFV+IYELLDE++DFG+PQ
Sbjct: 65 IYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQ 124
Query: 550 NSDTGVLKTFITQQGIKSASKGGTSPDYLTSNWSDW 657
+++ +L+ +ITQ+G K S P +N W
Sbjct: 125 TTESRILQEYITQEGQKLIS--APRPPMAVTNAVSW 158
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 641 VTGQIGWRREGIKYRRNELFLDVLEYVXLLMSPQG 745
VT + WR EGIKYR+NE+FLDV+E V +L S G
Sbjct: 152 VTNAVSWRSEGIKYRKNEVFLDVIESVNMLASANG 186
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 125 bits (301), Expect = 5e-29
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Frame = +1
Query: 196 LFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRS--PVTNIARTSFFHIKRAN 369
+F+ + KG+ +ISR YR DI A+D F ++++ +++ S PV T+F IK N
Sbjct: 6 MFILDLKGKTIISRNYRGDIDMTAIDKF-IHLLMEKEEEGSAAPVLTYQDTNFVFIKHTN 64
Query: 370 IWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQ 549
I+L + + NVN M+ FL K ++V YF + EE++++NFV+IYELLDE++DFG+PQ
Sbjct: 65 IYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQ 124
Query: 550 NSDTGVLKTFITQQGIKSASKGGTSPDYLTSNWSDW 657
+++ +L+ +ITQ+G K S P +N W
Sbjct: 125 TTESRILQEYITQEGQKLIS--APRPPMAVTNAVSW 158
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 641 VTGQIGWRREGIKYRRNELFLDVLEYVXLLMSPQG 745
VT + WR EGIKYR+NE+FLDV+E V +L S G
Sbjct: 152 VTNAVSWRSEGIKYRKNEVFLDVIESVNMLASANG 186
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 121 bits (292), Expect = 6e-28
Identities = 57/137 (41%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
Frame = +1
Query: 187 IGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHIKR 363
I GLF+ + KG V+ISR YR D+ + ++ F ++ + SPV S+ +IK
Sbjct: 3 ISGLFILDLKGNVVISRNYRGDVDMSCIEKFMPLLVEKEDEGSASPVLVHQGISYTYIKY 62
Query: 364 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 543
N++L ++K+N N +V L KI++V YF + EE +++NFV+IYEL DE+LDFGY
Sbjct: 63 MNVYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEAVRDNFVIIYELFDEMLDFGY 122
Query: 544 PQNSDTGVLKTFITQQG 594
PQ +++ +L+ FITQQG
Sbjct: 123 PQTTESKILQEFITQQG 139
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 611 REEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVXLLMSPQG 745
R E + VT + WR EGIKYR+NE+FLDV+E V +L + QG
Sbjct: 141 RLETVRPPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNMLANAQG 185
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 74.9 bits (176), Expect = 7e-14
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Frame = +1
Query: 184 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAF---RVNVIHARQQVRSPVTNIARTSFFH 354
M+ LF N G+VL+ + ++ I R+ D F + IH P+ + +
Sbjct: 1 MLNSLFFVNSSGDVLLEKHWKSVIHRSICDYFFDIQKKSIHPEDV--PPIISTPHHYLIN 58
Query: 355 IKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILD 534
+ + N++L AV MV EFL ++I YF + S+ ++K N V+++ELLDE+LD
Sbjct: 59 VYQNNLFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMKENCVMVFELLDEMLD 118
Query: 535 FGYPQNSDTGVLKTFI 582
G+P ++ +L+ I
Sbjct: 119 NGFPLVTEMNILQDLI 134
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +2
Query: 644 TGQIG---WRREGIKYRRNELFLDVLEYVXLLMSPQG 745
TGQ+ WRR+G+KY NE + DV+E + +++ QG
Sbjct: 159 TGQLSNIPWRRQGVKYTNNEAYFDVIEEIDVIVDKQG 195
>AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, small
chain (clathrinassociated complex) protein 1 protein.
Length = 157
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 364 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFG- 540
A+++ +QN N + E + + ++++ YFG + E +I NF Y +LDE L G
Sbjct: 63 ASLYFCCAIEQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLAGE 122
Query: 541 YPQNSDTGVLKTFITQQGIK 600
+ S VLK Q I+
Sbjct: 123 IQETSKKQVLKAIAAQDLIQ 142
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Frame = +1
Query: 202 VYNHKGEVLISRVYRDDIGRNA----VDAFRVNVIHARQQVRSPVTNIARTSFFHIKRA- 366
+ + G++L++R + +D+ R+ VDAF + + ++ T + S ++
Sbjct: 8 ILSKTGKLLVARQFVNDMMRSRLEGLVDAFPKLIGNEKEAATRQHTFVETDSVRYVYHPL 67
Query: 367 -NIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI-KNNFVLIYELLDEILDFG 540
NI+L VT +N N E L + V+ Y E+ I ++F LI+ DE++ G
Sbjct: 68 DNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIF-AFDEVVTLG 126
Query: 541 YPQNSDTGVLKTF 579
Y ++ + ++TF
Sbjct: 127 YRESVNLAQIRTF 139
>U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chain
(clathrin associatedcomplex) protein 2 protein.
Length = 142
Score = 34.7 bits (76), Expect = 0.092
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Frame = +1
Query: 184 MIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAFRVNVIHARQQVRSPV-TNIARTSFFH 354
MI + + N G+ +++ Y DD + + + +HA VR TN F
Sbjct: 1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKL----IEEVHACVTVRDAKHTNFVEFRNFK 56
Query: 355 I---KRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDE 525
I + A ++ N E + ++V+ YF + E ++ NF +Y ++DE
Sbjct: 57 IVYRRYAGLYFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDE 116
Query: 526 ILDFG-YPQNSDTGVLKTFI 582
+ G + S T VLK +
Sbjct: 117 MFLAGEIRETSQTKVLKQLL 136
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 229 ISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFF 351
+ R++RDDIG V++ N I R++ ++ + + FF
Sbjct: 1761 VFRIHRDDIGMILVNSLNDNQIEVRERATDALSTLLQAKFF 1801
>U80027-19|AAC48129.2| 313|Caenorhabditis elegans F-box a protein
protein 64 protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 169 EASPTMIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIH 297
+++P I +F ++ G S Y DDI + A+D FRV H
Sbjct: 264 QSNPVDIAKVFKPDYVGGNEYSFEYSDDIHKFAIDCFRVGESH 306
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 267 CGRIQSECDPCSPAGAITCYQHCTHIFLPYQACKYLAGSSHKAKCERGH 413
C + Q C+PA +CYQ C+ L C L S + C++ +
Sbjct: 361 CIQQQQPMQQCAPACTQSCYQSCSTAQLVQMPC--LTQSVNSCSCQQNY 407
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 267 CGRIQSECDPCSPAGAITCYQHCTHIFLPYQACKYLAGSSHKAKCERGH 413
C + Q C+PA +CYQ C+ L C L S + C++ +
Sbjct: 362 CIQQQQPMQQCAPACTQSCYQSCSTAQLVQMPC--LTQSVNSCSCQQNY 408
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,744,775
Number of Sequences: 27780
Number of extensions: 453183
Number of successful extensions: 1361
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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