Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_P22
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...   262   3e-70
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...   259   2e-69
09_06_0103 + 20873310-20873382,20873530-20873735                       30   2.1  
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    29   6.6  
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216     29   6.6  

>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score =  262 bits (642), Expect = 3e-70
 Identities = 121/202 (59%), Positives = 152/202 (75%)
 Frame = +2

Query: 56  ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 235
           ++A   G    L+  E+DV  MLAA  HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1   MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60

Query: 236 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAF 415
           KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F
Sbjct: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120

Query: 416 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 595
            EPRLLI+ DP  DHQPI E++  NIP IA C+TDSP+R+VDI IP N K  +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180

Query: 596 LLAREVLRLRGVLPRDQRWDVV 661
           LLAR VL++RG +    +WDV+
Sbjct: 181 LLARMVLQMRGTILPGHKWDVM 202


>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score =  259 bits (634), Expect = 2e-69
 Identities = 118/191 (61%), Positives = 146/191 (76%)
 Frame = +2

Query: 89  LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 268
           L+  E+D+  MLAA  HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12  LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71

Query: 269 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 448
           IENP D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72  IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131

Query: 449 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 628
             DHQPI E++  NIP IA C+TDSP+R+VDI IP N K   SIG ++WLLAR VL++RG
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191

Query: 629 VLPRDQRWDVV 661
            +    +WDV+
Sbjct: 192 TILPGHKWDVM 202


>09_06_0103 + 20873310-20873382,20873530-20873735
          Length = 92

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 334 VCRAHRCYAYC---GTFHTRCFYQPDPSCIP*TSSLDCI 441
           +CR+ RC  YC   G    RC +  DPS     ++ +C+
Sbjct: 45  LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83


>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
            23812210-23812285,23813064-23813072,23813243-23813335,
            23813578-23813581,23813780-23814703,23814926-23815909,
            23816073-23816118,23816376-23816951,23817253-23817798,
            23817820-23818416
          Length = 2252

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 156  TFSAPRWVVAASILVTSSSLRASTSNP 76
            TF A RWV+AA   V  + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126


>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
          Length = 1030

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/66 (19%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -1

Query: 684 TVGEPNQPTTSQRWSRGSTPRS--LNTSRANNHHIKPIEWEDLVLHGIAMSTNLSGESVL 511
           +  +P++PT + RWS  S PR+  + +S  ++  +  +    ++    ++   +  E+ L
Sbjct: 46  SASKPSKPTAAVRWSTSSIPRASRIPSSVESSKLVSTLRASSVMPGRASVGKEMEAEAGL 105

Query: 510 HKAITG 493
            ++++G
Sbjct: 106 RRSVSG 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,699,797
Number of Sequences: 37544
Number of extensions: 565657
Number of successful extensions: 1452
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)