Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_P21
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    32   0.53 
12_02_0674 - 21745321-21746223,21746229-21747608                       29   4.9  
04_04_0577 + 26349205-26349669,26350384-26350482,26350887-263510...    29   4.9  
12_02_1252 - 27346314-27347327                                         29   6.5  
11_03_0066 + 9529969-9530166,9530271-9530450,9530559-9531287,953...    29   6.5  
11_04_0340 - 16536571-16536705,16536820-16536951,16537265-165381...    28   8.6  
02_05_1304 + 35581172-35581345,35582504-35582748,35583148-355838...    28   8.6  

>04_03_0018 -
           9434088-9434141,9434211-9434282,9434968-9435062,
           9435445-9435526,9435610-9435660,9435749-9435829,
           9435965-9436006,9436117-9436215,9438130-9438201,
           9438557-9438680,9438850-9439723,9440274-9440456,
           9440941-9442741,9442825-9443049,9443117-9443814,
           9444519-9444591
          Length = 1541

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = +2

Query: 605 YDDNTDY-NIAVIYSEYDITTQTVLVSGD---DSLXITSTSCSPRLGRRFSTPFSHIQKX 772
           YDD  +  +I V +   +I +      G    + L ITST CSPR     + PFSH    
Sbjct: 352 YDDEVEVGSIDVFFEAVEIFSNLDSQEGQRDAEILSITSTECSPRAELMKTAPFSHFDME 411

Query: 773 VVKNG 787
           +   G
Sbjct: 412 IGLGG 416


>12_02_0674 - 21745321-21746223,21746229-21747608
          Length = 760

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +3

Query: 57  PTSSLNVSISMSTHSFPTRLKLSSKRTQIVRIPT--GGTLLSAYFQKLSIKSTKAQFS 224
           PT++    +S  T   PT  +     T   +IPT  G + LS    K+S  S   QFS
Sbjct: 621 PTTARTGELSTPTDKIPTTTRAGDLSTATSKIPTAPGTSELSTTTSKISSTSCAGQFS 678


>04_04_0577 +
           26349205-26349669,26350384-26350482,26350887-26351064,
           26351900-26352087,26352335-26352373
          Length = 322

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 14  RAYKRHPNHKVPFQPDLFVECINLNEYSQLSNKTQAVIQANANR 145
           R Y R+  ++ PF PD+ V+ I+L + S L +   A I    +R
Sbjct: 198 RKYIRYTLNEKPFNPDVVVDLIHLRKASMLEDAEVAEILNEISR 241


>12_02_1252 - 27346314-27347327
          Length = 337

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -1

Query: 523 GL*DEMEWKAAPFSSVPRQRPHHAEIGQTQSSHCRHEFVMVSDGTK 386
           GL DEM W   P+S+       HA +     +H  + +    DG K
Sbjct: 261 GLADEMTWPQPPYSAFREDSFGHAVLDIKNRTHAYYAWYRNDDGAK 306


>11_03_0066 +
           9529969-9530166,9530271-9530450,9530559-9531287,
           9531554-9531706,9531803-9532238,9532322-9532501,
           9532643-9532889,9533090-9533123,9533385-9533489,
           9533833-9533967,9534220-9534399,9534504-9534626
          Length = 899

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = -2

Query: 537 DVAMEVYKMRWNGK 496
           D+AMEVYK+ WNG+
Sbjct: 689 DIAMEVYKIVWNGQ 702


>11_04_0340 -
           16536571-16536705,16536820-16536951,16537265-16538106,
           16538480-16538940,16539032-16540314,16540423-16541627,
           16541857-16542157
          Length = 1452

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 97  TAFQQDSSCHPSERKSFGS--RLAVHCCPHIFK 189
           T FQ  SS    ++  F S  +L + CCPHI K
Sbjct: 899 TPFQSFSSFRTEQKSWFPSLNKLTIGCCPHISK 931


>02_05_1304 +
           35581172-35581345,35582504-35582748,35583148-35583829,
           35583908-35584262,35584558-35584649,35584889-35585083,
           35585167-35585840,35586134-35586224
          Length = 835

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 355 LHTQTSWEDDLYCRKLADIS*SGQKLRQWH 266
           L+ +TSWE + +C+ L   + + ++ + WH
Sbjct: 164 LYAETSWEKESWCKALRLAATADKEKKNWH 193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,513,510
Number of Sequences: 37544
Number of extensions: 507127
Number of successful extensions: 1289
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)