Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P18
(861 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 37 0.024
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 36 0.032
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_32784| Best HMM Match : RVT_1 (HMM E-Value=3.9e-26) 36 0.042
SB_56622| Best HMM Match : ImpA-rel_N (HMM E-Value=1) 36 0.056
SB_54193| Best HMM Match : REF (HMM E-Value=8.4) 36 0.056
SB_42670| Best HMM Match : RVT_1 (HMM E-Value=5.6e-27) 36 0.056
SB_8667| Best HMM Match : SAP (HMM E-Value=2.3) 36 0.056
SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8) 36 0.056
SB_567| Best HMM Match : RVT_1 (HMM E-Value=8.3e-05) 36 0.056
SB_37579| Best HMM Match : SAP (HMM E-Value=2.3) 36 0.056
SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.056
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 36 0.056
SB_534| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.056
SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 35 0.074
SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26) 35 0.098
SB_7633| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.098
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 34 0.13
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_24260| Best HMM Match : Rotavirus_VP7 (HMM E-Value=7.7) 34 0.13
SB_17216| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_50872| Best HMM Match : AraC_E_bind (HMM E-Value=7.5) 34 0.17
SB_40188| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_30951| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_27524| Best HMM Match : RVT_1 (HMM E-Value=1.30321e-43) 34 0.17
SB_24320| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_15450| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_12986| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_10577| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_7040| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_54734| Best HMM Match : RVT_1 (HMM E-Value=0.24) 34 0.17
SB_51268| Best HMM Match : SAP (HMM E-Value=2.3) 34 0.17
SB_51096| Best HMM Match : Baculo_ME53 (HMM E-Value=5.6) 34 0.17
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) 34 0.17
SB_41518| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_41512| Best HMM Match : SAP (HMM E-Value=2.3) 34 0.17
SB_41403| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_40322| Best HMM Match : RVT_1 (HMM E-Value=7.4e-27) 34 0.17
SB_35035| Best HMM Match : Mic1 (HMM E-Value=5.3) 34 0.17
SB_34517| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_17280| Best HMM Match : Ribosomal_S15 (HMM E-Value=6.2) 34 0.17
SB_6674| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_2851| Best HMM Match : RVT_1 (HMM E-Value=3.50325e-43) 34 0.17
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 33 0.23
SB_20743| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 33 0.23
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 33 0.23
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_18362| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 33 0.30
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_51996| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_10119| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.52
SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 32 0.52
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 32 0.52
SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 32 0.52
SB_31085| Best HMM Match : RVT_1 (HMM E-Value=0.0094) 32 0.52
SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4) 32 0.52
SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_32313| Best HMM Match : RnaseH (HMM E-Value=2.5) 32 0.52
SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.52
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 32 0.52
SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 32 0.69
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.69
SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046) 32 0.69
SB_42513| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 32 0.69
SB_35779| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.69
SB_13145| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.4) 32 0.69
SB_57671| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.91
SB_53749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.91
SB_17007| Best HMM Match : VWA (HMM E-Value=4.6e-06) 31 0.91
SB_12291| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-09) 31 0.91
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 31 0.91
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 31 0.91
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 31 0.91
SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32) 31 0.91
SB_37501| Best HMM Match : SCP (HMM E-Value=1.2e-19) 31 0.91
SB_19206| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_11838| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.91
SB_11436| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_11114| Best HMM Match : UPF0203 (HMM E-Value=9.6) 31 0.91
SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_34376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_24607| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 1.2
SB_10379| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4898| Best HMM Match : CaMBD (HMM E-Value=1.2) 31 1.2
SB_30161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6) 31 1.2
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 31 1.2
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89) 31 1.2
SB_15624| Best HMM Match : Phage_G (HMM E-Value=9.5) 31 1.2
SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_59603| Best HMM Match : PT (HMM E-Value=1.7) 31 1.6
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 31 1.6
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 1.6
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 31 1.6
SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31) 31 1.6
SB_12578| Best HMM Match : DUF488 (HMM E-Value=9.4) 31 1.6
SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_56951| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_51377| Best HMM Match : IL8 (HMM E-Value=10) 31 1.6
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_40661| Best HMM Match : RF-1 (HMM E-Value=9.3) 31 1.6
SB_34884| Best HMM Match : RVT_1 (HMM E-Value=8.1e-25) 31 1.6
SB_13856| Best HMM Match : CXC (HMM E-Value=0.021) 31 1.6
SB_9947| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2) 31 1.6
SB_3528| Best HMM Match : DUF1316 (HMM E-Value=6.9) 31 1.6
SB_1554| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_962| Best HMM Match : RVT_1 (HMM E-Value=2.5e-36) 31 1.6
SB_58751| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_51856| Best HMM Match : DUF593 (HMM E-Value=3.3) 30 2.1
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 30 2.1
SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 30 2.1
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_3627| Best HMM Match : DUF488 (HMM E-Value=8) 30 2.1
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 30 2.8
SB_36270| Best HMM Match : Viral_P18 (HMM E-Value=4.9) 30 2.8
SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21) 30 2.8
SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022) 30 2.8
SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_43560| Best HMM Match : DUF633 (HMM E-Value=4.4) 30 2.8
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 30 2.8
SB_17392| Best HMM Match : DUF385 (HMM E-Value=1.1) 30 2.8
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 30 2.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 2.8
SB_47406| Best HMM Match : RB_A (HMM E-Value=6.4) 29 3.7
SB_40958| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 29 3.7
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 29 3.7
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 29 3.7
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_48265| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_41641| Best HMM Match : PT (HMM E-Value=3.1) 29 3.7
SB_27463| Best HMM Match : C_tripleX (HMM E-Value=0.11) 29 3.7
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 29 3.7
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 29 4.9
SB_53921| Best HMM Match : Viral_P18 (HMM E-Value=2.6) 29 4.9
SB_52416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 29 4.9
SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8) 29 4.9
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_23599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_19415| Best HMM Match : LON (HMM E-Value=4.4) 29 4.9
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 29 4.9
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_55213| Best HMM Match : Viral_P18 (HMM E-Value=2.6) 29 4.9
SB_52244| Best HMM Match : RVT_1 (HMM E-Value=9.5e-20) 29 4.9
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 4.9
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_5109| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_43651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 6.4
SB_10703| Best HMM Match : Homeobox (HMM E-Value=4.6e-08) 29 6.4
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 6.4
SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 29 6.4
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_25793| Best HMM Match : TP901-1_ORF40 (HMM E-Value=8.3) 29 6.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 29 6.4
SB_9003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29) 28 8.5
SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 28 8.5
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_42946| Best HMM Match : Peptidase_M48 (HMM E-Value=0.082) 28 8.5
SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7) 28 8.5
SB_20533| Best HMM Match : U-box (HMM E-Value=9.6e-25) 28 8.5
SB_9324| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 28 8.5
SB_59101| Best HMM Match : PT (HMM E-Value=0.026) 28 8.5
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 28 8.5
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 28 8.5
SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20) 28 8.5
SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_34939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 8.5
SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08) 28 8.5
SB_13093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_12566| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 28 8.5
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
P++ R P+ +PPPRR P P P N P P P P + +R + P+
Sbjct: 905 PSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSP 964
Query: 61 GRGTSTAPRP 32
R P
Sbjct: 965 RRARRKVASP 974
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
P + R PS +PPP R P P + + S R + P Q + ++ G +R
Sbjct: 930 PPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRKVASPEEQ-DRQKSNGRNSR 988
Query: 61 GRGTSTAPR 35
S R
Sbjct: 989 SVSPSAVKR 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Frame = -3
Query: 598 PRHDSPSHQRPGKPPRRSVAPTWGWPIASTT----TRARTAENGPSAPAAHSRGHAPR-- 437
PRH S + PPRRS P P T R+R + PS P R +P
Sbjct: 1049 PRHQSRERRPSSSPPRRS-RPQRTSPSPRRTPEDRRRSRGSRRSPSPPKREPRRRSPSAS 1107
Query: 436 -PEHEARCATDSR 401
P EAR + SR
Sbjct: 1108 PPRREARKRSLSR 1120
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = -3
Query: 598 PRHDSPSHQRPGKPPRR-----SVAPTWGWPIASTTTRARTAENGPSAPAAHSRGHAP 440
PR SP +R PPRR S +P P ++ AR+ SA HS+ +P
Sbjct: 649 PRRRSPFRERRRSPPRRTSRWSSQSPDRRSPARIKSSPARSRSRSQSASPRHSKSKSP 706
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = -3
Query: 217 PSIAPP----PRRDGAQPDPVPQ-YSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRG 53
PS +PP P+R P P+ + GS+ PSP P +S P R R
Sbjct: 1058 PSSSPPRRSRPQRTSPSPRRTPEDRRRSRGSRRSPSPPKREPRRRSPSASPPRREARKRS 1117
Query: 52 TSTAPR 35
S +P+
Sbjct: 1118 LSRSPK 1123
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 37.5 bits (83), Expect = 0.014
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Frame = -3
Query: 220 GPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAP------QSEHERPTGCPTRG 59
G + P R G P P P Y G+ P PS G P P H PTG P
Sbjct: 566 GQTYVPDHRTTGGYPAPTPSYP-QPGTYPPPHPSGGYPQPSPPHGGHPHHPPPTGYPGGY 624
Query: 58 RGTSTAPRPLSG 23
GT TAP P G
Sbjct: 625 PGTHTAP-PAGG 635
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 36.7 bits (81), Expect = 0.024
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
PT ++T P + PP+ G+ +PV + + R S S P+P S H P+ P+R
Sbjct: 46 PTSPYKTSPFM--PPQSPGSMQNPVSPHRTYQHNLPRGSQSSVPPSPHSYHSAPS--PSR 101
Query: 61 GRGTST----APRPLSGRLQPRCS 2
G S A P SG P C+
Sbjct: 102 YAGPSAYMPGAISPSSGICTPSCA 125
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 36.3 bits (80), Expect = 0.032
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -3
Query: 250 AAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAP-QSEHERPTG 74
AAQPTQ P+ AP ++ A P P P + P+P+ PAP Q++ P+
Sbjct: 713 AAQPTQAQNPAPTPAPTQAQNPA-PTPAPTQA------QNPAPT---PAPTQAQPPVPSP 762
Query: 73 CPTRGRGTSTAPRPLSGRLQ 14
PT+ + + +P P LQ
Sbjct: 763 APTQAQPPAPSPAPTQALLQ 782
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 36.3 bits (80), Expect = 0.032
Identities = 31/91 (34%), Positives = 34/91 (37%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
GA P P A P R G + PPP R G P P P + S+ P PS G P
Sbjct: 294 GAAPPP--PSRGAPPPPPSR-GSAPPPPPARMGTAPPPPPP---SRSSQRPPPPSRGAPP 347
Query: 103 PQSEHERPTGCPTRGRGTSTAPRPLSGRLQP 11
P S P P G P P G P
Sbjct: 348 PPSMGMAPP--PVGGAAPPPPPPPPVGGPPP 376
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/88 (28%), Positives = 30/88 (34%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
GA P G A P PPP R +P P + + S P +GG A
Sbjct: 303 GAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAA 362
Query: 103 PQSEHERPTGCPTRGRGTSTAPRPLSGR 20
P P G G P P+ GR
Sbjct: 363 PPPPPPPPVG------GPPPPPPPIEGR 384
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/74 (31%), Positives = 26/74 (35%)
Frame = -3
Query: 280 ARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAP 101
+R P P P V P PPP G P P P + RP S+G P P
Sbjct: 342 SRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPP-------IEGRPPSSLGNPPP 394
Query: 100 QSEHERPTGCPTRG 59
R G P G
Sbjct: 395 PPPPGR--GAPPPG 406
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 35.9 bits (79), Expect = 0.042
Identities = 27/83 (32%), Positives = 31/83 (37%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
PG + P+ G PPP G P P P G+A S +P P GG AP
Sbjct: 904 PGGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPS--QPPPP-GGNAPPPPPPPG 960
Query: 79 TGCPTRGRGTSTAPRPLSGRLQP 11
P G G P P G P
Sbjct: 961 GSAPPPGGGAPPLPPPPGGSAPP 983
>SB_32784| Best HMM Match : RVT_1 (HMM E-Value=3.9e-26)
Length = 759
Score = 35.9 bits (79), Expect = 0.042
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 408 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 466
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 467 APVWASLPEYLAELIETVKRK----AIRII--YPCLSYESGLKVA 505
>SB_56622| Best HMM Match : ImpA-rel_N (HMM E-Value=1)
Length = 529
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 142 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 200
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 201 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 239
>SB_54193| Best HMM Match : REF (HMM E-Value=8.4)
Length = 172
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 40 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 98
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 99 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 137
>SB_42670| Best HMM Match : RVT_1 (HMM E-Value=5.6e-27)
Length = 591
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 426 KILGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 484
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 485 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 523
>SB_8667| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 439
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 122 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 180
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 181 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 219
>SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8)
Length = 845
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 657 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 715
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 716 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 754
>SB_567| Best HMM Match : RVT_1 (HMM E-Value=8.3e-05)
Length = 371
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 206 KILGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 264
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 265 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 303
>SB_37579| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 287
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 122 KLLGVHISADLSWNVHVDHIVKKASKRLFAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 180
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 181 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 219
>SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 685 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 743
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 744 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 782
>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 1788
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 350 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 408
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 409 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 447
>SB_534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 35.5 bits (78), Expect = 0.056
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 331 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 389
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 390 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 428
>SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 391
Score = 35.1 bits (77), Expect = 0.074
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 270 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGIQQSDMVLIYCSLIRSVLEYA 328
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 329 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 367
>SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26)
Length = 416
Score = 34.7 bits (76), Expect = 0.098
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 321 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 379
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEA 345
APVWA P A + ++R AIR+I Y +S+E+
Sbjct: 380 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYES 413
>SB_7633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 34.7 bits (76), Expect = 0.098
Identities = 21/97 (21%), Positives = 43/97 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 174 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PIKQRTNFYNAMIKPLFSY 231
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVS 336
VW + ++RFL +R + + +R S
Sbjct: 232 AGTVWQTASTKDCLSRFLTLQKRAARLILNAEHRAPS 268
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/82 (34%), Positives = 32/82 (39%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
G +P PG P QV GP P P + P P P G G K P P+ G
Sbjct: 854 GPNGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSP-PGPPGPPGPKGPPGPN-GCLG 911
Query: 103 PQSEHERPTGCPTRGRGTSTAP 38
P + P G T G G AP
Sbjct: 912 PPGD-AGPAG-NTGGAGCQPAP 931
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
G +P PG P ++ GP+ P P + P P P G G K P P+ GP
Sbjct: 599 GPNGQPGPPGVNGPPGEIGEIGPAGLPGPPGPASPPSP-PGPPGPPGPKGPPGPN--GPL 655
Query: 103 PQSEHERPTG 74
P G
Sbjct: 656 GPPGESGPAG 665
Score = 32.3 bits (70), Expect = 0.52
Identities = 22/64 (34%), Positives = 25/64 (39%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
G +P PG P QV GP P P + P P P G G K P P+ G
Sbjct: 769 GPNGQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSP-PGPPGPPGPKGPPGPN-GPLG 826
Query: 103 PQSE 92
P E
Sbjct: 827 PPGE 830
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 220 GPSIAP-PPRRDGAQ-PDPVPQYSGAAGSKNRPSP--SIGGPAPQSEHERPTG 74
GP + P PP GA P+ P +G G P + GGP Q H P G
Sbjct: 459 GPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAG 511
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 220 GPSIAP-PPRRDGAQ-PDPVPQYSGAAGSKNRPSP--SIGGPAPQSEHERPTG 74
GP + P PP GA P+ P +G G P + GGP Q H P G
Sbjct: 544 GPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAG 596
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
G +P PG P Q+ GP P P + P P P G G P P+ G
Sbjct: 684 GPNGQPGPPGINGPPGQIGEMGPPGLPGPPGPASPPSP-PGPPGPPGPNGPPGPN-GPLG 741
Query: 103 PQSE 92
P E
Sbjct: 742 PPGE 745
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAP-PPRRDGAQ-PDPVPQYSGAAGSKNRPSP--SIGGPAPQSE 92
PG P GP + P PP GA P P +G G P + GGP Q
Sbjct: 191 PGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGN 250
Query: 91 HERPTG 74
H P G
Sbjct: 251 HGNPAG 256
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAP-PPRRDGAQ-PDPVPQYSGAAGSKNRPSP--SIGGPAPQSE 92
PG P GP + P PP GA P P +G G P + GGP Q
Sbjct: 276 PGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGN 335
Query: 91 HERPTG 74
H P G
Sbjct: 336 HGNPAG 341
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Frame = -3
Query: 259 PGC---AAQPTQVHRTGPSIAPPPRR--DGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQS 95
PGC PT P+ P G + P + +G N +P+ P+
Sbjct: 889 PGCYFPTPAPTTTPWVWPNATAPTATTPSGGGNETAPTATPPSGGGNETAPTATPPSGVG 948
Query: 94 EHERPTGCPTRGRGTSTAPRPLSG 23
PT P G G TAP SG
Sbjct: 949 NETVPTATPPSGSGNETAPTATSG 972
>SB_24260| Best HMM Match : Rotavirus_VP7 (HMM E-Value=7.7)
Length = 319
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 156 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PIKQRTNFYNAMIKPLFSY 213
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 214 AGTVWQTASTKDCLSRFLTLQKRAARL 240
>SB_17216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 55 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PIKQRTNFYNAMIKPLFSY 112
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 113 AGTVWQTASTKDCLSRFLTLQKRAARL 139
>SB_50872| Best HMM Match : AraC_E_bind (HMM E-Value=7.5)
Length = 206
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 40 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 98
Query: 229 APVWA 243
PVWA
Sbjct: 99 GPVWA 103
>SB_40188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 66 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVGEYA 124
Query: 229 APVWA 243
PVWA
Sbjct: 125 GPVWA 129
>SB_30951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 40 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 98
Query: 229 APVWA 243
PVWA
Sbjct: 99 GPVWA 103
>SB_27524| Best HMM Match : RVT_1 (HMM E-Value=1.30321e-43)
Length = 593
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 380 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 437
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 438 AGTVWQTASTKDCLSRFLTLQKRAARL 464
>SB_24320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 53 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 110
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 111 AGTVWQTASTKDCLSRFLTLQKRAARL 137
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/75 (30%), Positives = 27/75 (36%)
Frame = -3
Query: 256 GCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPT 77
G P++ GP + PPRR G PD Y G +RP P P P P
Sbjct: 92 GRGGPPSRGPPRGPPLPGPPRR-GPPPDRDSGYGGYGDRYDRPPPDRRPPPPDRSGYPPP 150
Query: 76 GCPTRGRGTSTAPRP 32
RG RP
Sbjct: 151 RDYDRGYADRPRERP 165
>SB_15450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 40 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 98
Query: 229 APVWA 243
PVWA
Sbjct: 99 GPVWA 103
>SB_12986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 55 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 112
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 113 AGTVWQTASTKDCLSRFLTLQKRAARL 139
>SB_10577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 12 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 70
Query: 229 APVWA 243
PVWA
Sbjct: 71 GPVWA 75
>SB_7040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/87 (20%), Positives = 40/87 (45%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 115 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PIKQRTNFYNAMIKPLFSY 172
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++++FL +R +
Sbjct: 173 AGTVWQTASTKDSLSKFLTLQKRAARL 199
>SB_54734| Best HMM Match : RVT_1 (HMM E-Value=0.24)
Length = 299
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 174 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 232
Query: 229 APVWA 243
PVWA
Sbjct: 233 GPVWA 237
>SB_51268| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 204
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H LV + +L R+L G + +Y ++RS+ Y
Sbjct: 84 KLLGVHISADLSWNVHVDHLVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 142
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + + R AIR+I Y +S++ +A
Sbjct: 143 APVWASLPEYLAELIETVHRK----AIRII--YPCLSYDQGLKVA 181
>SB_51096| Best HMM Match : Baculo_ME53 (HMM E-Value=5.6)
Length = 238
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 115 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 172
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 173 AGTVWQTASTKDCLSRFLTLQKRAARL 199
>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
Length = 419
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 214 SIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGT-STAP 38
S PPPR+ Q P+P G + ++ P+P P QS+ + P P+RG+ ++P
Sbjct: 361 SPTPPPRQSDKQSPPIPS-RGQSNKQSSPTP----PPRQSDKQSPP-IPSRGQSNKQSSP 414
Query: 37 RPLSG 23
P G
Sbjct: 415 TPPPG 419
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -3
Query: 214 SIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGT-STAP 38
S PPPR+ Q P P G + ++ P+P P QS+ + P P+RG+ ++P
Sbjct: 335 SPTPPPRQSDKQSPPTPS-RGQSNKQSSPTP----PPRQSDKQSPP-IPSRGQSNKQSSP 388
Query: 37 RP 32
P
Sbjct: 389 TP 390
>SB_41518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 85 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 143
Query: 229 APVWA 243
PVWA
Sbjct: 144 GPVWA 148
>SB_41512| Best HMM Match : SAP (HMM E-Value=2.3)
Length = 249
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 84 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCSLIRSVLEYA 142
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y + +E+ +A
Sbjct: 143 APVWASLPEYLAELIETVQRK----AIRII--YPCLGYESGLKVA 181
>SB_41403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1415
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 174 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 231
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 232 AGTVWQTASTKDCLSRFLTLQKRAARL 258
>SB_40322| Best HMM Match : RVT_1 (HMM E-Value=7.4e-27)
Length = 710
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 597 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 655
Query: 229 APVWA 243
PVWA
Sbjct: 656 GPVWA 660
>SB_35035| Best HMM Match : Mic1 (HMM E-Value=5.3)
Length = 235
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 69 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLIAIYCVLIRSVVEYA 127
Query: 229 APVWA 243
PVWA
Sbjct: 128 GPVWA 132
>SB_34517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + + ++ H +V + +L R+L G + +Y ++RS+ Y
Sbjct: 198 KLLGVHISADLSWNVHVDHIVKKASKRLYAL-RVLRKAGVQQSDMVLIYCLLIRSVLEYA 256
Query: 229 APVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 257 APVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 295
>SB_17280| Best HMM Match : Ribosomal_S15 (HMM E-Value=6.2)
Length = 315
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/89 (31%), Positives = 43/89 (48%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ L S + H ++ + +L R L G + R+Y ++RS+ Y
Sbjct: 149 KILGVHLSSDLTWSVHVEYVIKKASKWLYAL-RSLKKFGVQSNDLVRIYCVLIRSVLEYA 207
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVI 315
APVWA A ++ L QR +A+RVI
Sbjct: 208 APVWA--GLPAFLSDLLEAVQR-IAMRVI 233
>SB_6674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 90 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 147
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 148 AGTVWQTASTKDCLSRFLTLQKRAARL 174
>SB_2851| Best HMM Match : RVT_1 (HMM E-Value=3.50325e-43)
Length = 890
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 677 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 734
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 735 AGTVWQTASTKDCLSRFLTLQKRAARL 761
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Frame = -3
Query: 250 AAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAA-------GSKNRPSPSIGGPAPQSE 92
+A P +GP PPP R +Q P +G++ +NRP P + GP E
Sbjct: 204 SAPPPPERSSGPP-PPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGE 262
Query: 91 HERPTGC-PTRGRGTSTAPRP 32
P P RG+S P P
Sbjct: 263 PPPPKNAPPPPKRGSSNPPPP 283
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGG---PAPQSEHERPTGC 71
P H S PPP R P P P G + P P+ PAP RP
Sbjct: 195 PPPPHSRHGSAPPPPERSSGPPPP-PPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPP- 252
Query: 70 PTRGRGTSTAPRP 32
P RG + P P
Sbjct: 253 PMRGPTSGGEPPP 265
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = -3
Query: 625 PAPDER*DVPRHDSPSHQRPGKPPRRSVAPTWGWPIASTTTRARTAENGPSAPAAHSRGH 446
P PD + + S P P + P+ P T +RT+ NGP P G
Sbjct: 148 PPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKP---TFGNSRTSTNGPPPPPHSRHGS 204
Query: 445 APRP 434
AP P
Sbjct: 205 APPP 208
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
P + P APPP + P P G P P P P+ P PTR
Sbjct: 231 PPPTGSSRPLPAPPP----GENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTR 286
Query: 61 G 59
G
Sbjct: 287 G 287
Score = 28.3 bits (60), Expect = 8.5
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
P R + PPP R P P P +++ P P G APQ P P
Sbjct: 320 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPP-PGRAPQPLGGPPP--PPP 376
Query: 61 GRGTSTAPRPLSGRLQP 11
GR RP SG++ P
Sbjct: 377 GR------RPPSGKINP 387
>SB_20743| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 375
Score = 33.5 bits (73), Expect = 0.23
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 631 SAPAPDER*DVPRHDSPSHQRPGKPPRRSVAPTWGWPIASTTTRA-RTAENGPSAPAAHS 455
+AP PD D+ R SP QR + P R AP P+ S R+ R AP A
Sbjct: 154 TAPEPDTPVDIARARSPRGQRQSQIP-RGTAPEQDPPVDSARARSPRGQRQSKIAPWAAP 212
Query: 454 RGHAPRPEHEARCATDSRQ 398
P AR RQ
Sbjct: 213 EQDPPMDSARARSPRGQRQ 231
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = -3
Query: 631 SAPAPDER*DVPRHDSPSHQRPGK-----PP---RRSVAPTWGWPIASTTTRARTAENGP 476
+AP PD R SP QR + PP R+++P W P +S + R P
Sbjct: 99 TAPDPDIPVYSARARSPRGQRQSENLRTIPPVDSARTISPPWIAPKSSQSQIPRWTAPEP 158
Query: 475 SAPAAHSRGHAPRPEHEAR 419
P +R +PR + +++
Sbjct: 159 DTPVDIARARSPRGQRQSQ 177
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Frame = -3
Query: 250 AAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAA-------GSKNRPSPSIGGPAPQSE 92
+A P +GP PPP R +Q P +G++ +NRP P + GP E
Sbjct: 116 SAPPPPERSSGPP-PPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGE 174
Query: 91 HERPTGC-PTRGRGTSTAPRP 32
P P RG+S P P
Sbjct: 175 PPPPKNAPPPPKRGSSNPPPP 195
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGG---PAPQSEHERPTGC 71
P H S PPP R P P P G + P P+ PAP RP
Sbjct: 107 PPPPHSRHGSAPPPPERSSGPPPP-PPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPP- 164
Query: 70 PTRGRGTSTAPRP 32
P RG + P P
Sbjct: 165 PMRGPTSGGEPPP 177
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = -3
Query: 625 PAPDER*DVPRHDSPSHQRPGKPPRRSVAPTWGWPIASTTTRARTAENGPSAPAAHSRGH 446
P PD + + S P P + P+ P T +RT+ NGP P G
Sbjct: 60 PPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKP---TFGNSRTSTNGPPPPPHSRHGS 116
Query: 445 APRP 434
AP P
Sbjct: 117 APPP 120
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
P + P APPP + P P G P P P P+ P PTR
Sbjct: 143 PPPTGSSRPLPAPPP----GENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTR 198
Query: 61 G 59
G
Sbjct: 199 G 199
Score = 28.3 bits (60), Expect = 8.5
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
P R + PPP R P P P +++ P P G APQ P P
Sbjct: 232 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPP-PGRAPQPLGGPPP--PPP 288
Query: 61 GRGTSTAPRPLSGRLQP 11
GR RP SG++ P
Sbjct: 289 GR------RPPSGKINP 299
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -1
Query: 540 PPRG-VGQSPRPRLEHGPPRMGLPR--PQLTLGDTRHAPS--TKLAAPPIV 403
PP G G RP + GPP MG R P +G RH+PS + L APP V
Sbjct: 2125 PPMGQYGAPARPAM--GPPPMGSSRYGPPPPMGPARHSPSGPSPLGAPPSV 2173
>SB_18362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/87 (21%), Positives = 38/87 (43%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
++ LGL +DS+ F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 50 VRLLGLDVDSKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 107
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + + RFL +R +
Sbjct: 108 AGTVWQTASTKDCLTRFLTLQKRAARL 134
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 133 EALVLVPDQGGVNQLRVQQKPDSAGPKFHGRCHRCNKQGHKAADCRCSQNH 183
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 32.7 bits (71), Expect = 0.39
Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Frame = -1
Query: 552 DGP*PPRGVGQSPRPRLEHGPPRMGLPRPQLTLGDT---RHAPSTKLAAPPIVGSEXXXX 382
D P P + + P+ + PP M P + + R P + APP G +
Sbjct: 213 DSPIPEKDMVVVTIPQPKTSPPAMVKREPCMVDEEGHEHRVTPPSFPTAPPRAGYDPQNP 272
Query: 381 XXXXXXXXQNTRRLEGDGAISADDPDGNGALRPAQ-----EPSHSGPVARLSPHRCTVQG 217
+ +G A + + + + RPA +P+H+ P+ R SPH +
Sbjct: 273 YSYGAYCAYTQAQPQGFNAQAYPYENNSASARPAMPHYNSDPAHTEPLPRFSPH---LSH 329
Query: 216 HRSHHPRVETAHNLIRSP 163
+ P VE N I SP
Sbjct: 330 YTQPTPVVEEPQNRINSP 347
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAHN 178
+ + D G LR Q+P +GP HRC QGH++ R H+
Sbjct: 992 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSQNHH 1043
>SB_51996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/87 (21%), Positives = 38/87 (43%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
+K LGL +D + F H ++ G G L+++ + P + Y +++ + Y
Sbjct: 163 VKLLGLDVDIKLTFSDHAERTYKKIAGRIGVLNKIKGCL--PLKQRTNFYNAMIKPLFSY 220
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
VW + ++RFL +R +
Sbjct: 221 AGTVWQTASTKDCLSRFLTLQKRAARL 247
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 QLKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRL-YAGVVRSMA 219
++KYLG+ + + H AE V + G L R N+ D + Y G+VRS+
Sbjct: 37 EIKYLGVTITRDLRWNRHVAETVSKANKILGLLRR---NLHFCDTKAKEAAYVGLVRSLL 93
Query: 220 LYGAPVW 240
Y + +W
Sbjct: 94 EYASAIW 100
>SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAHNL--IRSPN 160
+ + D G LR Q+P +GP HRC Q H++ R H L + +
Sbjct: 167 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQAHKAADCRCSKNHQLKNVGKLD 226
Query: 159 IREQPAQRTGRPHQSGDQLRKVSTKGPPAVQHEAEVLQ 46
I A ++ + Q+ + G +Q EA +Q
Sbjct: 227 ISRSAANQSKHLEKQSLQVDQNQRAGSHLIQVEAVDVQ 264
>SB_10119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 211 IAPPPR-RDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAPR 35
I PPP+ RDG +P P P+ S ++ +I P P+ + +RP P R P
Sbjct: 10 IPPPPQFRDGHRPVPTPRKSVKRMAQEYEDNTIPPPPPEYQ-DRPVPTP---RARRPVPT 65
Query: 34 PLSGRLQPR 8
P++ +Q R
Sbjct: 66 PITRIVQTR 74
>SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 651 PEASVPGQHLHQTKGETSLATIHPVIKDRVNRLDGP*PPRGVGQSPRPRLEHG 493
P+ S+ QHL ++ + + T H +++V R+ P PP + P R+E G
Sbjct: 773 PQGSISAQHLAESDEQAAEQTAHEPAREKVERITSPEPPATRPKHP-GRVEAG 824
>SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSQNH 225
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 95 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 145
>SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 508
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 104 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 154
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 167 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSQNH 217
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 225
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 232 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSQNH 282
>SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 403
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 95 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSQNH 145
>SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 515
Score = 32.3 bits (70), Expect = 0.52
Identities = 22/75 (29%), Positives = 27/75 (36%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
G EP WP + + GP+ PRR P VP + P P I G
Sbjct: 224 GPPFEPPWPEDQVRGPRPDNWGPN---DPRRGPGDPRRVPGNDPRRPVNDGPKPGILGSP 280
Query: 103 PQSEHERPTGCPTRG 59
P+ P PT G
Sbjct: 281 PRGPDNLPLAPPTSG 295
>SB_31085| Best HMM Match : RVT_1 (HMM E-Value=0.0094)
Length = 270
Score = 32.3 bits (70), Expect = 0.52
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 QLKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRR-LYAGVVRSMA 219
++KYLG+ + + H AE V + G L R N+ D + +YAG+VR
Sbjct: 194 EIKYLGVTITRDLRWNRHVAETVSKANKILGLLRR---NLHFCDTKAKEAVYAGLVRPQL 250
Query: 220 LYGAPVW 240
Y + +W
Sbjct: 251 EYASAIW 257
>SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4)
Length = 770
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 651 PEASVPGQHLHQTKGETSLATIHPVIKDRVNRLDGP*PPRGVGQSPRPRLEHG 493
P+ S QHL ++ + + T H +++V R+ P PP + P R+E G
Sbjct: 189 PQGSTSAQHLAESDEQAAEQTAHEPAREKVERITSPEPPAARPKHP-GRVEAG 240
>SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 438
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 155 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 205
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 25 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 75
>SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 225
>SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 297
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 225
>SB_32313| Best HMM Match : RnaseH (HMM E-Value=2.5)
Length = 721
Score = 32.3 bits (70), Expect = 0.52
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K G+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 563 KIFGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 621
Query: 229 APVWA 243
PVWA
Sbjct: 622 GPVWA 626
>SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 295
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 173 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 223
>SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 32.3 bits (70), Expect = 0.52
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = -1
Query: 330 GAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAHNLIRSPNIRE 151
G S+ D D + Q +++G A ++ GH + + A N + +
Sbjct: 180 GKTSSSDADQQHTVNAVQPANNTGNPASITGQPVNTTGHPESNAG-QPASNTGQPTSNTG 238
Query: 150 QPAQRTGRPHQSGDQLRKVSTKGPPAVQHEA 58
QPA TG+P ++ D+ R + T+ ++ H +
Sbjct: 239 QPANNTGQPARTRDKPRVLRTRITLSMPHSS 269
>SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 225
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 55 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 105
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSQNH 225
>SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 382
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 201 EALVLVPDQAGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADCRCSKNH 251
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 250 AAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGA-AGSKNRPSPSIGGPAPQSEHERPTG 74
+A+P T S+ PP G + P P+ G+ AGS P+ + P ++ P
Sbjct: 521 SAKPPTKKTTPQSMIPP----GTKTSPTPKPPGSPAGSTQGPTDGVVSAKPPTKKTTPQS 576
Query: 73 CPTRGRGTSTAPRP 32
G+ T P+P
Sbjct: 577 MIPPGKPTDQTPKP 590
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = -3
Query: 634 RSAPAPDER*DVPRHDSPSHQRPGKPPRRSVAPTWGWPIASTTTRARTAENGPSAPAAHS 455
+S+ P E +P+ P+ Q PG + P TT A GP+ PA +
Sbjct: 205 QSSTRPGETTAIPKQTGPT-QPPGST--KITTPQHETKPGETTVSTPKAP-GPTQPAGTT 260
Query: 454 RGHAPRPEHEARCATDS 404
+ AP+PE + T S
Sbjct: 261 KNTAPQPETQPEGTTAS 277
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = -3
Query: 214 SIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAPR 35
S PP ++ G P S P+PS G +P S + TR T+ P+
Sbjct: 160 STKPPTKKTGETQSPTENSISTEESATTPTPS-GSTSPTSPNNASPQSSTRPGETTAIPK 218
Query: 34 PLSGRLQP 11
+G QP
Sbjct: 219 Q-TGPTQP 225
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
P +P + + P P + G + PQ +P + GP ++ ++
Sbjct: 234 PQHETKPGETTVSTPKAPGPTQPAGTTKNTAPQPETQPEGTTASTPEVPGPTQPTQTKKT 293
Query: 79 TGCPTRGRGTSTAPRPLS-GRLQP 11
T P G +TA P + G QP
Sbjct: 294 TTKPVSQPGETTASTPKAPGPTQP 317
>SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046)
Length = 338
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC QGH++ R H
Sbjct: 58 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNRQGHKAADCRCSKNH 108
>SB_42513| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 519
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLL-PNIGGPDQVVRRLYAGVVRSMALY 225
KYLGL L + + EL + SL R L N + RL+ V+ LY
Sbjct: 438 KYLGLTLSANGRYNTAKQELKNSALKALLSLKRYLGKNFCSDISLTIRLFDSFVKPALLY 497
Query: 226 GAPVWA 243
G+ +WA
Sbjct: 498 GSELWA 503
>SB_35779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 208 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 265
Query: 229 APVWAEPRNRATMARF--LRRPQRTVAIR 309
W+ P + + + ++RP+ + ++
Sbjct: 266 TEAWS-PHTKKDIQKVESVQRPRCQICVQ 293
>SB_13145| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.4)
Length = 199
Score = 31.9 bits (69), Expect = 0.69
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 43 QLKYLGLVL--DSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRL-YAGVVRS 213
++KYLG+ + D RW H AE V + G L R N+ D + Y G+VR
Sbjct: 28 EIKYLGVTITRDVRW--NRHVAETVSKANKILGLLRR---NLHFCDTKAKEAAYVGLVRP 82
Query: 214 MALYGAPVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVSFE 342
+ Y + +W +P + + QR A V Y SFE
Sbjct: 83 LLEYASAIW-DPHTSKLIVE-IEEVQRRAARFVTADY-NFSFE 122
>SB_57671| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 533
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 390 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 447
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 448 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 477
>SB_53749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 28 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 85
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 86 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 115
>SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1025
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 902 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 959
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 960 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 989
>SB_17007| Best HMM Match : VWA (HMM E-Value=4.6e-06)
Length = 453
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 300 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 357
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 358 TKAWS-PHTKKDIQK-VESVQRRAARFVCNDY 387
>SB_12291| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-09)
Length = 843
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 629 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 686
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 687 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 716
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/73 (31%), Positives = 28/73 (38%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
PG PTQ R P+ PP + P PVP N P P PAP + +P
Sbjct: 209 PGNGVVPTQAPRP-PTTQTPPTKAPTDP-PVPP-------TNPPVPPTNPPAPPTNPPKP 259
Query: 79 TGCPTRGRGTSTA 41
C G + A
Sbjct: 260 GTCKASGAWSGNA 272
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 568 PGKPPRRSVAPTWGWPIASTTTRAR-TAENGPSAPAAHSRGHAPRPEHEARCATDSRQR 395
P P V PT T T AR T P+AP + AP HE A + RQR
Sbjct: 78 PTAAPAAPVTPTAAPAARVTPTAARVTPTAAPAAPVTPTAAPAPAQSHEEVAAPNLRQR 136
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 31.5 bits (68), Expect = 0.91
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Frame = -3
Query: 259 PGCAAQPTQVH--RTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNR----PSPSI---GGP 107
P AA P + +T PS+ PP +R + P P + +G R PSPS+ P
Sbjct: 259 PSSAAPPQSLPGLQTSPSLQPPSQR--STPSPQSMSALHSGKPKRPGMPPSPSVPHQSQP 316
Query: 106 A--------PQSEHERPTGCPTRGRGTSTAPRPLSGRLQP 11
A P+S P+G P G AP+P G+ +P
Sbjct: 317 AVPPAFATPPRSGASTPSGAPPTG-DEGMAPQPGQGQARP 355
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/85 (28%), Positives = 29/85 (34%)
Frame = -3
Query: 256 GCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPT 77
G + Q Q R+GP + P + PQ RP SI G +H PT
Sbjct: 153 GASQQTRQPPRSGPPVQQPYGMASSGQHAQPQ-------SQRPVQSIAGSTATGQHATPT 205
Query: 76 GCPTRGRGTSTAPRPLSGRLQPRCS 2
G T A P QP S
Sbjct: 206 GHGIPPSSTPQARAPPHSSTQPLSS 230
>SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32)
Length = 823
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 382 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 439
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 440 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 469
>SB_37501| Best HMM Match : SCP (HMM E-Value=1.2e-19)
Length = 351
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 166 PQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAPRPLSGR 20
PQ G G +P GG +P PT+G G ST+P P G+
Sbjct: 14 PQAPGGGGGSPTEAPGGGGGSPTEAPGGGGSTPTKGEG-STSPTPGGGK 61
>SB_19206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S + H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 12 KILGVHISSDLLWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRSVVEYA 70
Query: 229 APVW 240
PVW
Sbjct: 71 GPVW 74
>SB_11838| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1009
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 834 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 891
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 892 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 921
>SB_11436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 640
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++R + Y
Sbjct: 502 KILGVHISSDLSWNKHVDYVVKKANKRLYAL-RLLKKSGVPVQDLVAIYCVLIRYVVEYA 560
Query: 229 APVWA 243
PVWA
Sbjct: 561 GPVWA 565
>SB_11114| Best HMM Match : UPF0203 (HMM E-Value=9.6)
Length = 197
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 54 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 111
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 112 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 141
>SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Frame = -3
Query: 253 CAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTG 74
C Q S P DG +P P P A G + P P Q RP
Sbjct: 119 CTVQAGPSPARSQSAPVPDPTDGQRPSPRPVPDAADGQRQGPRPVPDPTDGQRPSPRPVP 178
Query: 73 CPTRGRGTSTAPR---PL-SGRLQPRC 5
PT G+ S R P+ S R+ +C
Sbjct: 179 HPTDGQRPSQHQRLILPMDSARVPDQC 205
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/131 (25%), Positives = 56/131 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG + ++ H + + M L R+L G + + +Y +VRS Y
Sbjct: 4349 KLLGYSISDDLSWNLHCETIFKKAMKRLYGL-RVLKKSGLTSEDLATVYCSIVRSTLEYA 4407
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADY 408
+P WA ++ L QR A+R I + V++E A + A P E A
Sbjct: 4408 SPAWA--ALPGYLSELLESVQRK-AMRTI--FPGVTYEEALLRASLEPLCFRRE--VACK 4460
Query: 409 RWRSELRARGV 441
++ + +ARG+
Sbjct: 4461 KFVTSCKARGL 4471
>SB_34376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 142 SRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWA 243
+RLL G P Q + +Y ++RS+ Y PVWA
Sbjct: 14 NRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWA 47
>SB_24607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 142 SRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWA 243
+RLL G P Q + +Y ++RS+ Y PVWA
Sbjct: 14 NRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWA 47
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = -3
Query: 220 GPSIAPPP----RRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAP 101
GP PPP + GA P P P G A P P IGG AP
Sbjct: 659 GPPPPPPPPPGGQAGGAPPPPPPPLPGGAAPP--PPPPIGGGAP 700
>SB_10379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 122 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PVAVKEQAYKALVRPLVEYG 179
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 180 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 209
>SB_4898| Best HMM Match : CaMBD (HMM E-Value=1.2)
Length = 259
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +1
Query: 187 RLYAGVVRSMALYGAPVWA-EPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAG 363
++Y VV LYG W R+ + RF R R + +R+ R + E VL
Sbjct: 153 KVYNAVVLPSLLYGCETWTLYCRHIKKLERFHTRSLRAI-MRIRWQDRITNLE---VLDR 208
Query: 364 TPPWELEAESLAADYRWRSELRARGVARVPESELRARKAHSRR 492
+EA+ L A RW + +R+P L + A R
Sbjct: 209 ADTTSIEAKILQAQLRWSGHVIRMEESRIPRQVLYSELASGYR 251
>SB_30161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 122 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 179
Query: 229 APVWA 243
W+
Sbjct: 180 TEAWS 184
>SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6)
Length = 304
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L + P V + Y +VR + YG
Sbjct: 103 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSSC--PAAVKEQAYKALVRPLVEYG 160
Query: 229 APVWA 243
W+
Sbjct: 161 TEAWS 165
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -3
Query: 217 PSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAP 38
P PPP+R G DP P+ G+K +P AP ER + +G + P
Sbjct: 92 PPPTPPPQRRGPPGDPGPK-----GNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGP 146
Query: 37 RPL 29
PL
Sbjct: 147 GPL 149
>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
Length = 589
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -3
Query: 661 AGTSRSIRARSAPAPDER*DVP-RHDSPSHQRPGKPP-RRSVAPTWGWPIASTTTRARTA 488
+ +S SI ++ A ER R S S +P PP +RS + P T + ++
Sbjct: 390 SSSSTSISRQTKEAKVERIVADTRQTSTSRSQPRDPPVQRSNSQRSSSPTKEVTVQRSSS 449
Query: 487 ENGPSAPAAH 458
+ GP +P+AH
Sbjct: 450 QRGPPSPSAH 459
>SB_15624| Best HMM Match : Phage_G (HMM E-Value=9.5)
Length = 288
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 49 KYLGLVLDS--RWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMAL 222
KYLG+ + S RW +A E+ + G L R L + ++ R Y +VR +
Sbjct: 97 KYLGVYITSSLRWDMQAE--EVKKKANRVLGVLQRNLSSCSV--RIKERAYTSLVRPILE 152
Query: 223 YGAPVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVS 336
YG+ W+ P + ++ L QRT A Y+ S
Sbjct: 153 YGSVAWS-PHTKRDIST-LESVQRTAARFTTGNYQRTS 188
>SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P GP HRC QGH++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSVGPKFDGRCHRCNKQGHKAADCRCSQNH 225
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -3
Query: 661 AGTSRSIRARSAPAPDER*DVP-RHDSPSHQRPGKPP-RRSVAPTWGWPIASTTTRARTA 488
+ +S SI ++ A ER R S S +P PP +RS + P T + ++
Sbjct: 3496 SSSSTSISRQTKEAKVERIVADTRQTSTSRSQPRDPPVQRSNSQRSSSPTKEVTVQRSSS 3555
Query: 487 ENGPSAPAAH 458
+ GP +P+AH
Sbjct: 3556 QRGPPSPSAH 3565
>SB_59603| Best HMM Match : PT (HMM E-Value=1.7)
Length = 71
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -3
Query: 202 PPRRDGAQPDP-VPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAPRP 32
PP DGA+P+P PQYSG PS A Q + P PT A P
Sbjct: 2 PPCVDGARPEPQYPQYSGVQPKAVLVDPSTAALA-QQMGDFPAPAPTHAPTKPAADLP 58
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = -3
Query: 271 EP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSE 92
EP P P +AP PR +QP QYSG P + +
Sbjct: 49 EPPTPAPTPPPALPSTPTLPLAPRPRPTASQPTTRTQYSGGGAIPPPLIPRVQAELHKDP 108
Query: 91 HERPTGCP-TRG 59
H +P P TRG
Sbjct: 109 HTKPEQVPITRG 120
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Frame = -3
Query: 259 PGCAAQPTQ-VHRTGPSIAPPPRR---DGAQPDPVPQYSGA----AGSKNRPSPSIGGPA 104
P A++P PS APPP + P PVP + A A S + P P + P
Sbjct: 309 PPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPSATSAPPPWATSNSGPKPLMSTPV 368
Query: 103 PQSEHERPTGCPTRGRGTSTAPRPLS 26
+ RP G G G P P S
Sbjct: 369 QRPPGMRPPGA---GNGPGGPPPPWS 391
>SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1400
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 722 RCPGRVHXCDTSSSAQPPIRRRYFPKHPCPVSTCTRRKVRRPSPRF 585
RC GR+H S +A+ P+ +F + T R+K+ PS RF
Sbjct: 1117 RCGGRIHNAPVSETAKFPV---FFRRKTTSTLTALRQKLCVPSGRF 1159
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 QLKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRL-YAGVVRSMA 219
++KYLG+ + + H AE V + G L R N+ D + Y G+VR +
Sbjct: 37 EIKYLGVTITRDLRWNRHVAETVSKANKILGLLRR---NLHFCDTKAKEAAYVGLVRPLL 93
Query: 220 LYGAPVW 240
Y + +W
Sbjct: 94 EYASAIW 100
>SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31)
Length = 541
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 145 RLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWA 243
RLL G P Q + +Y ++RS+ Y PVWA
Sbjct: 286 RLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWA 318
>SB_12578| Best HMM Match : DUF488 (HMM E-Value=9.4)
Length = 249
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 145 RLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWA 243
RLL G P Q + +Y ++RS+ Y PVWA
Sbjct: 114 RLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWA 146
>SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 LYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
+Y ++RS+ Y APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 487 IYCSLIRSVLEYAAPVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 538
>SB_56951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 651 PEASVPGQHLHQTKGETSLATIHPVIKDRVNRLDGP*PPRGVGQSPRPRLEHG 493
P+ S QHL ++ + + T H +++V R+ P PP + P R+E G
Sbjct: 500 PQGSTSAQHLAESDEKAAGQTAHEPAREKVERITSPEPPATRPKHP-GRVEAG 551
>SB_51377| Best HMM Match : IL8 (HMM E-Value=10)
Length = 123
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 LYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
+Y ++RS+ Y APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 4 IYCSLIRSVLEYAAPVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 55
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +1
Query: 187 RLYAGVVRSMALYGAPVWA-EPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAG 363
++Y +V LYG W R+ + RF R R + +R+ R + E VL
Sbjct: 3202 KVYNAIVLPSLLYGCETWTLYCRHIKKLERFHTRSLRAI-MRIRWQDRITNLE---VLDR 3257
Query: 364 TPPWELEAESLAADYRWRSELRARGVARVPESELRARKAHSRR 492
+EA+ L A RW + +R+P L + A R
Sbjct: 3258 ADTTSIEAKILQAQLRWSGHVIRMEESRIPRQVLYSELASGYR 3300
>SB_40661| Best HMM Match : RF-1 (HMM E-Value=9.3)
Length = 113
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 LYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
+Y ++RS+ Y APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 4 IYCSLIRSVLEYAAPVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 55
>SB_34884| Best HMM Match : RVT_1 (HMM E-Value=8.1e-25)
Length = 439
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/97 (20%), Positives = 41/97 (42%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
+KYLG+ +DS +++ + ++ G LS++ + V++ LY ++ Y
Sbjct: 236 IKYLGIYIDSHLSWKYQILHIAKKIKRCIGVLSKIRHYVN--ISVLKMLYYTLLFPFLTY 293
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVS 336
W F+ + +R + I +RT S
Sbjct: 294 SVVTWGNTYATTLKPLFILQ-KRAIRILTFSDFRTPS 329
>SB_13856| Best HMM Match : CXC (HMM E-Value=0.021)
Length = 464
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 LYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
+Y ++RS+ Y APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 345 IYCSLIRSVLEYAAPVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 396
>SB_9947| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2)
Length = 405
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 145 RLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWA 243
RLL G P Q + +Y ++RS+ Y PVWA
Sbjct: 270 RLLKKSGVPVQDLIAIYCVLIRSVVEYAGPVWA 302
>SB_3528| Best HMM Match : DUF1316 (HMM E-Value=6.9)
Length = 156
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 LYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
+Y ++RS+ Y APVWA P A + ++R AIR+I Y +S+E+ +A
Sbjct: 37 IYCSLIRSVLEYAAPVWASLPEYLAELIETVQRK----AIRII--YPCLSYESGLKVA 88
>SB_1554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 145 RLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRG 321
R+L G + +Y ++RS+ Y APVWA P A + ++R AIR+I
Sbjct: 39 RVLRKAGVQQSDMVLIYCSLIRSVLEYAAPVWASLPEYLAELIETVQRK----AIRII-- 92
Query: 322 YRTVSFEA 345
Y +S+E+
Sbjct: 93 YPCLSYES 100
>SB_962| Best HMM Match : RVT_1 (HMM E-Value=2.5e-36)
Length = 1195
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +1
Query: 187 RLYAGVVRSMALYGAPVWA-EPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAG 363
++Y +V LYG W R+ + RF R R + +R+ R + E VL
Sbjct: 972 KVYNAIVLPSLLYGCETWTLYCRHIKKLERFHTRSLRAI-MRIRWQDRITNLE---VLDR 1027
Query: 364 TPPWELEAESLAADYRWRSELRARGVARVPESELRARKAHSRR 492
+EA+ L A RW + +R+P L + A R
Sbjct: 1028 ADTTSIEAKILQAQLRWSGHVIRMEESRIPRQVLYSELASGYR 1070
>SB_58751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
KYLG+ + + + H E+ + G L R L P V + Y +VR + YG
Sbjct: 107 KYLGVHISTSLNWSKHTEEVKKKANAVLGILQRNLSPC--PAAVKEQAYKALVRPLVEYG 164
Query: 229 APVWAEPRNRATMARFLRRPQRTVAIRVIRGY 324
W+ P + + + + QR A V Y
Sbjct: 165 TEAWS-PHTKKDIQK-VESVQRRAARFVCNDY 194
>SB_51856| Best HMM Match : DUF593 (HMM E-Value=3.3)
Length = 314
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = -3
Query: 241 PTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKN----RPSPSIGGPAPQSEHERPTG 74
P TGP + P RR P P+ + S+ + SP+ S + G
Sbjct: 144 PPAEKATGPRVRRPFRRSATSPSPIDTSIAKSKSQRAVGVQASPNEIRLNVSSAKSKSKG 203
Query: 73 CPTRGRGTSTAPRP 32
PTR R +S+ RP
Sbjct: 204 LPTRPRRSSSPSRP 217
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = -3
Query: 241 PTQVHRT--GPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPS--PSIGGPAPQSEHERPTG 74
P HR GP P +R P G G + PS P+ GGP P + RP+G
Sbjct: 297 PPHDHRDFHGPPDGPHGQRMQHHDIRGPDPRGDRGPRGPPSGVPTSGGPPPGHQGLRPSG 356
Query: 73 CPTRG-RGTSTAPRPLSGRLQP 11
+G G P+SG P
Sbjct: 357 PNNQGPPGPGPNMPPVSGPSNP 378
>SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLL-PNIGGPDQVVRRLYAGVVRSMALY 225
KYLGL L + + EL + SL R + N + RL+ V+ LY
Sbjct: 469 KYLGLTLSANGRYNTAKQELKNSALKALLSLKRNIGKNFCSDMSLTIRLFDSFVKPALLY 528
Query: 226 GAPVWA 243
G+ +WA
Sbjct: 529 GSELWA 534
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLL-PNIGGPDQVVRRLYAGVVRSMALY 225
KYLGL L + + EL + SL R L N + RL+ ++ LY
Sbjct: 858 KYLGLTLSANGRYNTAKQELKNSALKALFSLRRNLGENFCSDISLTIRLFDSFMKPALLY 917
Query: 226 GAPVWA 243
G+ +WA
Sbjct: 918 GSELWA 923
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 585 HPVIKDRVNRLDGP*PPRGVGQSPRPRLEHGPPRMGLPRPQLTLGDTRHAPST 427
H I R +R P P + +PRPR HGP PRP + H P+T
Sbjct: 58 HDPITPRPHRPTAPRPHDPI--APRPRSPHGPV---APRPHRPISPRPHRPTT 105
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 220 GPSIAPPPRRDGAQPDPVPQYSGAA-GSKNRPSPSIGGPAPQSEHERPTGCPTRGR 56
G S APPPRR Q + Q G G++ +P+ P PQ + RGR
Sbjct: 659 GSSPAPPPRRQQRQLNRDSQSPGLGHGARAQPAMRSTPPLPQQQENSELSVLGRGR 714
>SB_3627| Best HMM Match : DUF488 (HMM E-Value=8)
Length = 188
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 145 RLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWA 243
RLL G P Q + +Y ++RS+ Y PVWA
Sbjct: 53 RLLKKSGVPVQDLVAIYCVLIRSVLEYAGPVWA 85
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 259 PGCAA-QPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHER 83
PG ++ +P + G + A P A+P+ VP +GAA +K+ PS + G
Sbjct: 1629 PGSSSTKPGTSAKPGAATAKPGAAS-AKPEAVPAKTGAASTKSGPSAAKPGSTKSGTLSA 1687
Query: 82 PTGCP 68
TG P
Sbjct: 1688 KTGEP 1692
>SB_36270| Best HMM Match : Viral_P18 (HMM E-Value=4.9)
Length = 283
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H ++ + +L RLL G + +Y ++RS+ Y
Sbjct: 155 KFLGVFISHDLSWNNHVEHVLSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 213
Query: 229 APVWA 243
+PVWA
Sbjct: 214 SPVWA 218
>SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21)
Length = 499
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H ++ + +L RLL G + +Y ++RS+ Y
Sbjct: 375 KFLGVFISHDLSWNNHVEHVLSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 433
Query: 229 APVWA 243
+PVWA
Sbjct: 434 SPVWA 438
>SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022)
Length = 297
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -1
Query: 333 DGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAH 181
+ + D G LR Q+P +GP HRC Q H++ R H
Sbjct: 175 EALVLVPDQGGVNQLRVQQKPDSAGPKFDGRCHRCNKQAHKAADCRCSKNH 225
>SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = -3
Query: 202 PPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAPR---P 32
P DG +P P P A G + P P Q RP PT G+ S R P
Sbjct: 13 PDPTDGQRPSPRPVPDAADGQRQGPRPVPDPTDGQRPSPRPVPHPTDGQRPSQHQRLILP 72
Query: 31 L-SGRLQPRC 5
+ S R+ +C
Sbjct: 73 MDSARVPDQC 82
>SB_43560| Best HMM Match : DUF633 (HMM E-Value=4.4)
Length = 284
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H ++ + +L RLL G + +Y ++RS+ Y
Sbjct: 117 KFLGVFISHDLSWNNHVEHVLSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 175
Query: 229 APVWA 243
+PVWA
Sbjct: 176 SPVWA 180
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -3
Query: 202 PPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCP 68
PP A P VPQ G +N P + P PQ P G P
Sbjct: 199 PPPGGYAPPPYVPQEGGGIPPQNHPLTNYPAPPPQGYAPPPGGYP 243
>SB_17392| Best HMM Match : DUF385 (HMM E-Value=1.1)
Length = 942
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 253 CAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNR 131
C A P + R PS P PR GA+ +P P G +R
Sbjct: 689 CGAHPRERPRPRPSQQPAPRVRGARSNPPPLTLHTGGEADR 729
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 568 PGKPPRRSVAPTWGWPIASTTTRAR-TAENGPSAPAAHSRGHAPRPEHEARCATDSRQR 395
P P V PT T T AR T P+AP + AP HE A + R+R
Sbjct: 235 PTAAPAAPVTPTAAPAARVTPTAARVTPTAAPAAPVTPTAAPAPAQSHEEVAAPNLRKR 293
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = -3
Query: 292 AAAGARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQ-PDPVPQYSGAAGSKNRP---S 125
A + A T P P P+Q PS PPP + P P P + A G P +
Sbjct: 103 AQSVAPTPPPPPRAPETPSQA----PSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIA 158
Query: 124 PSIGGPAP 101
P+ GGP P
Sbjct: 159 PATGGPPP 166
>SB_47406| Best HMM Match : RB_A (HMM E-Value=6.4)
Length = 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 112 PRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVW 240
PR+ + SL R+L G + R+Y ++RS+ Y +PVW
Sbjct: 165 PRVKRSLYSL-RVLKKAGVHQADLVRIYCSIIRSVMEYASPVW 206
>SB_40958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = -3
Query: 217 PSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAP 38
P+ P P + G P P+P Y G P P + + PT T T P
Sbjct: 182 PNAMPTPPQ-GVTPAPLPPYFQQQGYGYPQQPQPTQPVQPGQTQAPTAAQTTPAPVQTTP 240
Query: 37 RP 32
P
Sbjct: 241 AP 242
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 516 PRPRLEHGPPRMGLPRPQLTLGDTRH 439
P+P + PP+ GLP+P + TRH
Sbjct: 474 PQPVQTYVPPQQGLPQPVYQIDQTRH 499
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -3
Query: 256 GCAAQPTQVHRTGPSIAPPPRRDGAQP----DPVPQYSGAAGSKNRPSPS 119
GC A + + P+ PPP G Q DP QYS AG +P+
Sbjct: 41 GCCAANSGSPQASPAYQPPPAYPGYQAPSTYDPYGQYSNPAGCAPECAPT 90
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 99 CGAGPPIDGDGRFFEP-AAPEYWGTGSGCAPSLRGGGAIDGPVRCT 233
C AG + +P AA EY TG C P G ++ G CT
Sbjct: 319 CPAGEEVAASKAACQPCAAGEYSNTGEACQPCTTGYFSLGGASSCT 364
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -1
Query: 513 RPRLE-HGPP-RMGLPRPQLTLGD 448
RPR HGPP RMGLP+P L G+
Sbjct: 376 RPRFRPHGPPARMGLPQPLLENGN 399
>SB_48265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 49 KYLGLVLDS--RWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMAL 222
KYLG+ + S RW +A E+ + G L R L + ++ R Y +VR +
Sbjct: 82 KYLGVYITSSLRWDMQAD--EVKKKANRVLGVLQRYLSSCSV--RIKERAYTSLVRPILE 137
Query: 223 YGAPVWA--EPRNRATMARFLRRPQR 294
YG+ W+ R+ +T+ RR R
Sbjct: 138 YGSLAWSPHTKRDISTLESVQRRAAR 163
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 546 P*PPRGVGQSPRPRLEHGPPRMGLPRPQLTLGDTRHAPSTKLAAPP 409
P PP + P P L PP + RP + T A +T+ PP
Sbjct: 908 PPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPP 953
>SB_41641| Best HMM Match : PT (HMM E-Value=3.1)
Length = 873
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Frame = -3
Query: 247 AQPTQVHRTGPSIAPPPRRD-----GAQPDPVPQYS-GAAGSKNRPSPSIGGPAPQSEHE 86
A+PT++ + A P +R GA P PQ G A RP +GG P +
Sbjct: 581 AEPTKLPQAPVGEAKPTKRPQSPVGGAVPTKRPQAPVGEAEPTKRPQAPVGGAVPTKRPQ 640
Query: 85 RPTG 74
P G
Sbjct: 641 APVG 644
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGA-----QPDPVPQYS-GAAGSKNRPSPSIGGPAPQ 98
P A+PT+ + A P +R A +P +PQ G A RP +GG P
Sbjct: 551 PNGQAEPTKRPQAPVGEAEPTKRPQAPVGEAEPTKLPQAPVGEAKPTKRPQSPVGGAVPT 610
Query: 97 SEHERPTG 74
+ P G
Sbjct: 611 KRPQAPVG 618
>SB_27463| Best HMM Match : C_tripleX (HMM E-Value=0.11)
Length = 123
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -3
Query: 256 GCAAQPTQVHRTGPSIAPPPRRDGAQP----DPVPQYSGAAGSKNRPSPS 119
GC A + + P+ PPP G Q DP QYS AG +P+
Sbjct: 70 GCCAANSGSPQASPAYQPPPAYPGYQAPSTYDPYGQYSNPAGCAPECAPT 119
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 112 GPAPQSEHERPTGCPTRGRGTSTAPRP 32
GP P +E ERP G P R S P P
Sbjct: 536 GPLPYAEDERPRGTPPEYRFPSEEPSP 562
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 157 SGAAGSKNRPSPS--IGGPAPQSEHERPTGCPTRGRGTSTAPRPLSGRLQPR 8
+ AA ++P P+ + G Q +PTG P GR +PL +L P+
Sbjct: 1044 TAAAPQHHQPQPANQVTGIPAQQRLPQPTGNPVTGRPHQAVQQPLPQQLPPQ 1095
>SB_53921| Best HMM Match : Viral_P18 (HMM E-Value=2.6)
Length = 322
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H + + +L RLL G + +Y ++RS+ Y
Sbjct: 155 KFLGVFISHDLSWNNHVEHVFSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 213
Query: 229 APVWA 243
+PVWA
Sbjct: 214 SPVWA 218
>SB_52416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H + + +L RLL G + +Y ++RS+ Y
Sbjct: 284 KFLGVFISHDLSWNNHVEHVFSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 342
Query: 229 APVWA 243
+PVWA
Sbjct: 343 SPVWA 347
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 29.1 bits (62), Expect = 4.9
Identities = 27/90 (30%), Positives = 35/90 (38%)
Frame = -1
Query: 297 GALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAHNLIRSPNIREQPAQRTGRPHQ 118
GAL Q+ S + V + +P+ + HHPR T + SP+ QP T
Sbjct: 519 GALSKTQDTSRTH-VTQYAPYTHVTK----HHPRDNTRKDT--SPHTSHQPEVNTTEFFT 571
Query: 117 SGDQLRKVSTKGPPAVQHEAEVLQLHPDPY 28
VS K P A V Q H D Y
Sbjct: 572 QSQPELAVSRKSPIAAPVPLRVGQRHLDSY 601
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/60 (36%), Positives = 23/60 (38%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPA 104
GAR EP A QV R GP+ PP G P P P P I GPA
Sbjct: 157 GARGEPGQQ--APMMIQVSRPGPNKGPPGPGPGPGPGPAPGPGPIVQPVVPVQPVIPGPA 214
>SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8)
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
P C +P V T PS RR +Q P Y+ + R + G P SEH+
Sbjct: 25 PHCFPRPDDV--TEPS---NERRPASQNKTCPNYTSPTTNAAR-IVNEGCTKPASEHDVT 78
Query: 79 TGCPTRGRGTSTAPRP 32
CP R +T PRP
Sbjct: 79 CSCPQR---ETTPPRP 91
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGA-----QPDPVPQYS-GAAGSKNRPSPSIGGPAPQ 98
P A+PT+ + A P +R A +P +PQ G A RP +GG P
Sbjct: 1027 PNGQAEPTKRPQAPVGEAEPTKRPQAPVGEAEPTKLPQAPVGEAKPTKRPQSPVGGAVPT 1086
Query: 97 SEHERPTG 74
+ P G
Sbjct: 1087 KRPQAPVG 1094
>SB_23599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H + + +L RLL G + +Y ++RS+ Y
Sbjct: 117 KFLGVFISHDLSWNNHVEHVFSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 175
Query: 229 APVWA 243
+PVWA
Sbjct: 176 SPVWA 180
>SB_19415| Best HMM Match : LON (HMM E-Value=4.4)
Length = 360
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 151 LPNIGGPDQVVRRLYAGVVRSMALYGAPVWA 243
+P + D V R+Y ++RS+ Y APVWA
Sbjct: 230 IPGVQSNDLV--RIYYALIRSVLEYAAPVWA 258
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -3
Query: 259 PGCAA-QPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHER 83
PG ++ +P + G + A P A+P+ VP +GAA +K+ PS + P S
Sbjct: 524 PGSSSTKPGTSAKPGAATAKPGAAS-AKPEAVPAKTGAASTKSGPSAA----KPGSTKSA 578
Query: 82 PTGCPTRGRGTSTAPRPLS 26
+ TR ST P S
Sbjct: 579 KSQANTRPASKSTPSGPAS 597
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = +1
Query: 46 LKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALY 225
+K + L L + + H E+ + L++L G P Q + Y VRS+ Y
Sbjct: 862 VKLVRLTLTNNLTWNDHVTEVTKKASKRLYFLTQL-KRAGVPQQELVLFYTSCVRSLMDY 920
Query: 226 GAPVWAEPRNRATMARFLRRPQRTVAI 306
APV+ + F+ +R V+I
Sbjct: 921 TAPVFYNSLPQYLKNEFVHLEKRAVSI 947
>SB_55213| Best HMM Match : Viral_P18 (HMM E-Value=2.6)
Length = 371
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H + + +L RLL G + +Y ++RS+ Y
Sbjct: 155 KFLGVFISHDLSWNNHVEHVFSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 213
Query: 229 APVWA 243
+PVWA
Sbjct: 214 SPVWA 218
>SB_52244| Best HMM Match : RVT_1 (HMM E-Value=9.5e-20)
Length = 523
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K+LG+ + ++ H + + +L RLL G + +Y ++RS+ Y
Sbjct: 356 KFLGVFISHDLSWNNHVEHVFSKANKRLYAL-RLLKKAGLSVHDLCTIYCALIRSVLEYA 414
Query: 229 APVWA 243
+PVWA
Sbjct: 415 SPVWA 419
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 622 APDER*DVPRHDSPSHQRPG-KPPRRSVAPTWGWPIASTTTRARTAENGPSAPAAHSRGH 446
+P+ R PR SPS +RP P RRS +P+ P R + + P H R
Sbjct: 554 SPNNRSPPPRRRSPSPRRPSPSPRRRSTSPSRKSPPPRRVHRHQDVVH-PRRDVVHPRRD 612
Query: 445 APRPEHE 425
P +
Sbjct: 613 VVHPRQD 619
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = -3
Query: 247 AQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCP 68
+QP+ H P + +QP P ++S + ++PSP P+P+ P C
Sbjct: 749 SQPSPEHSLPSQEHSLPSPEHSQPSP--EHSQPSPEHSQPSPEHSQPSPEHSQPSPEHCQ 806
Query: 67 TRGRGTSTAP 38
+ +P
Sbjct: 807 PSPEHSQPSP 816
>SB_5109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 LYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLA 360
+Y ++RS+ Y APVWA P A + ++R AIR+I Y S+E+ +A
Sbjct: 4 IYCSLIRSVLEYAAPVWASLPEYLAELIETVQRK----AIRII--YPCHSYESGLKVA 55
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.7 bits (61), Expect = 6.4
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -3
Query: 640 RARSAPAPDER*DVPRHDSPSHQRPGKPP----RRSVAPTWGWPIASTTTRARTAENGPS 473
R R+A P + V D + PG+PP R +AP A T A+ E+ S
Sbjct: 226 RDRAASGPGPKPAVKPRDRLATAPPGRPPAPHTREKIAPVPSSKPAGTKEPAKDEESQQS 285
Query: 472 -APAAHSRG 449
PAA +RG
Sbjct: 286 KPPAAAARG 294
>SB_43651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = -3
Query: 283 GARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPD---PVPQYSGAAGSKNRPSPSIG 113
G T P G +A P + + P + A P+ P+ + A+ N SP
Sbjct: 176 GNSTSP--EGNSASPEGNSTSPEGNSTSPEGNSASPEGNSTSPEGNSASPEGNSTSPEGN 233
Query: 112 GPAPQSEHERPTGCPTRGRGTSTAP 38
+P+ P G T G ST+P
Sbjct: 234 SASPEGNSTSPEGNSTSPEGNSTSP 258
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -3
Query: 187 GAQPDPVPQ-YSGAAGSKNRPSPSIGGPAPQSEHERPT--GCPTRGRGTSTAPRP 32
G QP P Q Y G G+ + P G PQ + P G P G G + P P
Sbjct: 147 GQQPYPGQQAYPGQPGASPQGQPYPGQSYPQGQEPYPEKGGYPPAGVGQHSGPYP 201
>SB_10703| Best HMM Match : Homeobox (HMM E-Value=4.6e-08)
Length = 531
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -1
Query: 354 NTRRLEGDGAISADDPDGNGALRPAQEPSHSGPVARLSPHRCTVQ 220
N D I D P G R PS GP + +SPH V+
Sbjct: 355 NPTSRSNDHKIIPDSPTNAGRFRGKTFPSFGGPNSHVSPHSLRVR 399
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = -3
Query: 223 TGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTST 44
T P +P G P P YS + S + SPS +P P+ PT + T
Sbjct: 436 TSPGYSPSSPSSGYSPAS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 494
Query: 43 AP 38
+P
Sbjct: 495 SP 496
>SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 226 RTGPSIAPPPRRDGAQPDPVPQYSGAAGS 140
RT P +P PR D + DP+P + GS
Sbjct: 862 RTQPPQSPRPREDPPKDDPLPDWLAPPGS 890
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -3
Query: 202 PPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRG 53
PP +DG + P S AG++ RPS P + + P++ G
Sbjct: 6 PPWQDGGRGRKRPMQSHGAGNQRRPSKGDNTPNKKDQTTTQKESPSKAEG 55
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Frame = -3
Query: 217 PSIAPPPRRDGAQPDPV------PQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGR 56
P A PPR +P+P+ + G A + P P+ P+ E P G + R
Sbjct: 334 PKSASPPRHTLPRPEPIGGPVRGSEPKGVARADAPPVPARTDQTPRPERPVPAGASPQSR 393
Query: 55 GTSTAPRP 32
P P
Sbjct: 394 RRRPVPTP 401
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 184 AQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAPRPLSGRLQP 11
A PVP + RP P+ G +PQS RP P R +T+ PL QP
Sbjct: 365 ADAPPVPARTDQTPRPERPVPA--GASPQSRRRRPVPTPRRTVHKTTS-SPLLDPNQP 419
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 28.7 bits (61), Expect = 6.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 282 PAAAHRCHQGHPRISHR 332
P HR HQ HP+++HR
Sbjct: 246 PQVTHRYHQQHPQVTHR 262
>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 211 IAPPPRRDGAQPDPVPQYSGAAGSKNRPS 125
+AP R G PDP+PQY + RPS
Sbjct: 702 VAPSENR-GPTPDPIPQYKPMNNTPARPS 729
>SB_25793| Best HMM Match : TP901-1_ORF40 (HMM E-Value=8.3)
Length = 247
Score = 28.7 bits (61), Expect = 6.4
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +1
Query: 88 RAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWAE-PRNRAT 264
R+ + + V RL G R+L G Q + +Y +VRS Y + WA P+ +
Sbjct: 97 RSIYNKAVKRLYGL-----RVLRKSGLSTQDLVSVYCSIVRSSIEYASLTWAALPQYLSD 151
Query: 265 MARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADY--RWRSELRARG 438
M L R Q+ A++VI Y ++ ++ A A P + +S + R + G
Sbjct: 152 M---LERVQKK-ALQVI--YPSLQYDEALNAANMEPLHVRRDSACRRFVKSCRKDGLLVG 205
Query: 439 VARVPESELRARKAHS 486
+ + PE R HS
Sbjct: 206 IIQTPEVMSYGRVLHS 221
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = -3
Query: 217 PSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAP 38
P PPP P P P Y + N P P+ P P + P P P
Sbjct: 176 PPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPP 235
Query: 37 RP 32
P
Sbjct: 236 PP 237
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = -3
Query: 220 GPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTA 41
G PPP G P +G G P GGP P + G P G G
Sbjct: 542 GQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQE--GPPPPGAGQGGG 599
Query: 40 PRP 32
P P
Sbjct: 600 PPP 602
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/70 (24%), Positives = 26/70 (37%)
Frame = -3
Query: 217 PSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAP 38
PS P P + P P S + +P PA + P+ P + S+ P
Sbjct: 532 PSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPASNPKPNNPSSNP-KSNNPSSNP 590
Query: 37 RPLSGRLQPR 8
+P + PR
Sbjct: 591 KPNNPSSNPR 600
>SB_9003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 55 LGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAP 234
LGL LDS +F H ++ ++ L ++ + P +++Y +++ + YG+
Sbjct: 60 LGLDLDSELSFDGHVEKICKKVASRIAILRKIRSFL--PLAQRKQIYDALIQPIFNYGSA 117
Query: 235 VWAEPRNRA 261
VW+ N +
Sbjct: 118 VWSVCNNES 126
>SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29)
Length = 770
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 172 PVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAPR 35
P ++G A + R SP + G P S H G P R R
Sbjct: 335 PKDPWAGLANTSIRSSPPLTGSPPSSRHPHYGGSPPSSRNQQYGSR 380
>SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 QLKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRL-YAGVVRSMA 219
++KYLG+ + + H AE V + G L + N+ D + Y G+VR +
Sbjct: 745 EIKYLGVTITRDLRWNRHVAETVSKANKILGLLWQ---NLHFCDTKAKEAAYVGLVRPLL 801
Query: 220 LYGAPVW 240
Y + +W
Sbjct: 802 EYASAIW 808
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = -3
Query: 238 TQVHRTGPS-IAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
T+ GP I P G P P P G AG + + GP P S H P G P
Sbjct: 595 TRAPMGGPQGIGYPQGVQGRMPYPRPPGDGVAGPA-QGMQRMPGPMPMSGHLGPQGPPVV 653
Query: 61 GRGTSTAPRPLS 26
+ T P++
Sbjct: 654 YQKGPTGQPPVA 665
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 250 AAQPTQVHRTGPSIAPPP-RRDGAQPDPVPQYSGAAGSKNRPSPSIG-GPAPQSE-HERP 80
A Q T + PSI+ P +P P P S P+PS P P S P
Sbjct: 452 AYQKTSNPISNPSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDP 511
Query: 79 TGCPTRGRGTSTAPRPLS 26
+ P+ + +P P+S
Sbjct: 512 SPNPSSNPSSEPSPNPIS 529
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Frame = -3
Query: 220 GPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSP--SIGGPAPQSEHERPTGCP-----TR 62
GP PP +G P P GA G+ P G P P+ + CP +
Sbjct: 169 GPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPK 228
Query: 61 GRGTSTAPRPLSG 23
G+ T PR G
Sbjct: 229 GKRGETGPRGRPG 241
>SB_42946| Best HMM Match : Peptidase_M48 (HMM E-Value=0.082)
Length = 460
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 633 GQHLHQTKGETSLATIHPVIKDRVNRLD 550
G+ L+ KGE+ HP I DR+ RL+
Sbjct: 267 GKRLYSEKGESLKNNSHPKITDRLRRLE 294
>SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3
Query: 202 PPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
PP A+ P Q + S P S P P E +RPT TR
Sbjct: 172 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPKRPTRARTR 218
>SB_20533| Best HMM Match : U-box (HMM E-Value=9.6e-25)
Length = 223
Score = 28.3 bits (60), Expect = 8.5
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -3
Query: 256 GCAAQPTQVHRTGP----SIAPPPRRD-GAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSE 92
G PT T P + PP R GAQ P +G A K P GP P ++
Sbjct: 56 GSVTTPTNTGSTAPFERANRLPPIRPGAGAQGMPTVDVTGNATKKVLPQQDEAGPLP-NK 114
Query: 91 HERPTGCPTRGRGTSTAPRPL 29
T P + T T P P+
Sbjct: 115 VPLTTEFPPSDQPTPTQPSPV 135
>SB_9324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 55 LGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAP 234
LG+ + ++ H ++ + G L R N G P + + LY +VRS Y +
Sbjct: 46 LGVQVSQDLSWGEHTHNVISKANKMLGFLLRHCSN-GLPLDLQKTLYVSLVRSHLTYASQ 104
Query: 235 VWA 243
VWA
Sbjct: 105 VWA 107
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Frame = -3
Query: 220 GPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSP--SIGGPAPQSEHERPTGCP-----TR 62
GP PP +G P P GA G+ P G P P+ + CP +
Sbjct: 169 GPKAEPPFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGPPGPK 228
Query: 61 GRGTSTAPRPLSG 23
G+ T PR G
Sbjct: 229 GKRGETGPRGRPG 241
>SB_59101| Best HMM Match : PT (HMM E-Value=0.026)
Length = 386
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 75 AVQHEAEVLQLHPDPYPDASNH 10
+VQH Q P PYPD S+H
Sbjct: 3 SVQHSVRQHQPSPQPYPDRSSH 24
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = -3
Query: 223 TGPSIAPPPRRDGAQ--PDPVP-QYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRG 53
T P+ PPPRR + P+ P Q AG +P P PT CP
Sbjct: 17 TSPAKKPPPRRRSRETPPETPPVQLKHLAGPAEKPHRPSRETPPVQPRRNPT-CPAEKHH 75
Query: 52 TSTAPRPLSGRLQPR 8
S+ P +QPR
Sbjct: 76 RSSKETP---PVQPR 87
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + S ++ H +V + +L RLL G P Q + +Y ++RS+ Y
Sbjct: 870 KILGVHISSDLSWNKHVDYVVKKANKRFYAL-RLLKKSGIPVQDLVAIYCVLIRSVVEYA 928
Query: 229 APVWAEPRNR 258
P+ E RNR
Sbjct: 929 CPL--ERRNR 936
>SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20)
Length = 838
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 49 KYLGLVLDS--RWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMAL 222
KYLG+ + S RW +A E+ + G L R L + ++ R Y +VR +
Sbjct: 406 KYLGVYITSSLRWDMQAE--EVKKKANRVLGVLQRNLSSCSV--RIKERAYTSLVRPILE 461
Query: 223 YGAPVWAEPRNR 258
YG+ W+ R
Sbjct: 462 YGSVAWSPHAKR 473
>SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 252 ARLSPHRCTVQGHRSHHPRVETAHNLIRSPN 160
+R PH T H + V T H+ ++SPN
Sbjct: 104 SRPEPHEGTTTSHHATDAHVPTRHSTLKSPN 134
>SB_34939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 49 KYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYG 228
K LG+ + ++ H + + M L R+L G + + +Y ++RS Y
Sbjct: 138 KLLGVSISDDLSWNLHCETIFKKAMKRLYGL-RVLKKSGLASEDLVTVYCSIIRSTLEYA 196
Query: 229 APVWA 243
+P WA
Sbjct: 197 SPAWA 201
>SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 830
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -3
Query: 259 PGCAAQPTQVHRTGPSIAP-PPRRDGAQPDPVPQYSGAAGSKNRPSPSIGG----PAPQS 95
P A P + + P+IAP PP + P P + +G+ +P I G PAP
Sbjct: 298 PNTAPSPPNIAPSPPNIAPSPPNTAPSPPHSDPIAAALSGNLASTAPVISGQSSFPAPPP 357
Query: 94 E 92
E
Sbjct: 358 E 358
>SB_16338| Best HMM Match : PHD (HMM E-Value=3.8e-08)
Length = 652
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 100 AELVPRLMGTAGSLSRLLPNIGGPDQVVR---RLYAGVVRSMALYGAPVWAEPRNRATMA 270
A ++ R G LLP + +R ++Y+ VRS LY WA P++ + +A
Sbjct: 533 AAIITRTRSAWGKFKELLPVLSSKSLSLRTRGKVYSSCVRSAMLYAGECWA-PKS-SDLA 590
Query: 271 RFLR 282
R R
Sbjct: 591 RLQR 594
>SB_13093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 190 LYAGVVRSMALYGAPVWAE-PRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGT 366
+Y +VRS Y +P WA P+ + M ++++ A+RVI Y ++ ++ A A
Sbjct: 132 VYCSIVRSSIGYASPAWAALPQYLSDMLEWVQKK----ALRVI--YPSLQYDEALNAANM 185
Query: 367 PPWELEAES 393
P + +S
Sbjct: 186 EPLHVRRDS 194
>SB_12566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -3
Query: 250 AAQPTQVHRTGPSIAPPPRRDGAQPDP-VPQYSGAAGSKNRPSPSIGGPAPQSEHERPT 77
A Q H G + R+D +P P P +GAA + RPSP PA E + T
Sbjct: 12 ATQSLIAHTAGRGV----RQDECEPFPSAPLDAGAAQPRLRPSPYAADPARHGEGDALT 66
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Frame = -1
Query: 651 PEASVPGQHLHQTKGETSLATIHPVIKDRVNRLDGP*PPRGVGQSPRPRLEHGPPRMGLP 472
P +PG + S+ T HP ++ + P PPR P P PP P
Sbjct: 172 PPTRLPGNARVNAIDQISIGTSHPTSPSQITQPPPP-PPR---PPPSPPPPPPPPSPSPP 227
Query: 471 RPQLTLGDTRHAP-STKLAAPP 409
RP + P + KL PP
Sbjct: 228 RPPPPPPPSPPRPLAAKLPEPP 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,688,798
Number of Sequences: 59808
Number of extensions: 747911
Number of successful extensions: 3971
Number of sequences better than 10.0: 212
Number of HSP's better than 10.0 without gapping: 3033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3813
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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