Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P17
(906 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 39 0.005
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 32 0.55
03_06_0299 + 32956737-32957129,32957250-32957442,32957537-32958117 31 1.3
11_04_0138 - 13931937-13932835,13933457-13933460 31 1.7
08_02_1092 + 24267737-24268641,24269005-24269884 30 2.2
03_01_0131 - 1013982-1016246 30 2.2
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 29 3.8
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 29 3.8
10_08_0684 - 19870715-19872994 29 3.8
09_04_0520 + 18286435-18287279,18287818-18288697 29 3.8
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 29 3.8
08_01_0213 - 1703682-1703696,1703824-1703919,1704033-1704104,170... 29 3.8
05_07_0343 - 29404816-29405412 29 3.8
05_01_0142 - 940421-940701,941262-941574 29 3.8
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 5.1
10_08_0632 + 19442510-19442923 29 6.7
09_04_0275 + 16302086-16303721,16304182-16304734,16305491-163055... 29 6.7
02_05_1225 + 35060642-35060815,35061254-35061802,35062284-350623... 29 6.7
10_08_0210 - 15874289-15875663,15878248-15879263 28 8.9
06_02_0035 + 10816723-10819497,10819964-10820011 28 8.9
03_05_0264 - 22510997-22511012,22511641-22511709,22511783-225119... 28 8.9
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 28 8.9
01_06_1682 - 39130696-39131705,39132355-39132583 28 8.9
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 8.9
01_01_1029 - 8152182-8152589 28 8.9
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 28 8.9
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -1
Query: 594 PPLQPGAQAHVPFVHVPPFMQMRRQPPCVLTG*GYKPPFPQEGASTPPGHRQMFGAIQAP 415
PP PG+ A VP+ PP+ PP Y PP P G +TPP + + AP
Sbjct: 424 PPPPPGSYAPVPWGQPPPYASYPPPPPGSSM---YNPPPPAPGQATPPPYGVQYAPPPAP 480
Query: 414 GEP 406
P
Sbjct: 481 IPP 483
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 482 GGLYPYPVRTQGGCRRICMNGGTC-TNGTCACAPGWSG 592
GG +P G C C G C NG C C GW+G
Sbjct: 556 GGPVQFP-GFNGSCPAKCTGHGICKANGICECESGWTG 592
>03_06_0299 + 32956737-32957129,32957250-32957442,32957537-32958117
Length = 388
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 583 LERGSSAQNRYVRSHVCTAAAVLRPD--RCVCFHGLSXSEMRDRQ 711
+E GS +R V S + +AAV RP RC CF+G + E D +
Sbjct: 62 VEAGSVGLDRMVLSFMEDSAAVERPQRGRCNCFNGSNYEESDDEE 106
>11_04_0138 - 13931937-13932835,13933457-13933460
Length = 300
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +2
Query: 257 RGQRMLDDRAPSQFVGSHVCRSRNSTHCCPGWTSRPNSLLCIVPLCRPDCGSPGACIAPN 436
RG+ + AP + V SH THC GW S S+ VP+ CG A
Sbjct: 170 RGRGRIIRWAPQEEVLSHPAIGAFLTHC--GWNSTLESISRTVPMICKPCGGDQLGTARY 227
Query: 437 IC 442
+C
Sbjct: 228 VC 229
>08_02_1092 + 24267737-24268641,24269005-24269884
Length = 594
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 344 PGWTSRPNSLLCIVPLC-RPDCGSPGACIAPNICRCP 451
P R N C+ P C +P C P +C+AP C P
Sbjct: 363 PDALQRNNQAYCVQPACIQPSCIQP-SCVAPTTCFGP 398
>03_01_0131 - 1013982-1016246
Length = 754
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 467 PSCGNGGLYPYPVRTQGGCRRICMNGGTCTN 559
PS G+ G+ P P + +G C ++GG C N
Sbjct: 154 PSFGDAGMPPPPKKWKGTCEFKAISGGGCNN 184
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +2
Query: 515 GGCRRICMNGGT---CTNGTCACAPGWSGGVLHRTD 613
GGC + +G T CTN C C G+ G +H+ +
Sbjct: 480 GGCWKDSRHGRTYSACTNDGCKCPDGFKGDGVHKCE 515
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +2
Query: 515 GGCRRICMNGGT---CTNGTCACAPGWSGGVLHRTD 613
GGC + +G T CTN C C G+ G +H+ +
Sbjct: 480 GGCWKDSRHGRTYSACTNDGCKCPDGFKGDGVHKCE 515
>10_08_0684 - 19870715-19872994
Length = 759
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 467 PSCGNGGLYPYPVRTQGGCRRICMNGGTCTN 559
PS G+ GL P P +G C + GG C N
Sbjct: 161 PSFGDDGLQPPPKNWKGTCEFKAIAGGGCNN 191
>09_04_0520 + 18286435-18287279,18287818-18288697
Length = 574
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 359 RPNSLLCIVPLC-RPDCGSPGACIAPNICRCP 451
R N+ C+ P C P C P +C+AP C P
Sbjct: 348 RNNAAYCVQPACIEPSCIQP-SCVAPTTCFGP 378
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 492 YKPPFPQEGASTPPGHRQMFGAIQAPGEPQSGR 394
Y PP PQ PP QM+G P +P G+
Sbjct: 36 YAPPPPQMWGQAPPPPPQMWGQAPPPPQPAYGQ 68
>08_01_0213 -
1703682-1703696,1703824-1703919,1704033-1704104,
1704372-1704444,1704508-1704710,1705058-1706330,
1706800-1706868,1706940-1707088,1707275-1707487,
1708385-1708669
Length = 815
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Frame = +2
Query: 344 PGWTS----RPNSLLCIVPLCRPDCGSPGACIAPNICRCPGGVEAPSCGNGGLYPYPVR- 508
P WTS P C P G P C V P+ G GG Y Y V
Sbjct: 9 PPWTSPRGAAPRWSPC-TPAGADGSGRAAHATPPASGGCSSHVTPPASGGGGCYGYRVTP 67
Query: 509 -TQGGCRR 529
T GGC R
Sbjct: 68 PTSGGCSR 75
>05_07_0343 - 29404816-29405412
Length = 198
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 443 RCPGGVEAPSCGNGGLYPYPVRTQGGCRRI-CMNGG 547
+C GV+ CG+ P T+ GC R C NGG
Sbjct: 141 KCTAGVDFHECGHFAFMVRPNFTRIGCARAECFNGG 176
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = -1
Query: 591 PLQPGAQAHVPFVHVPPFMQMRRQPPCVLTG*GYKPPFPQEGASTPPGHRQMFGAIQAPG 412
P PGA P + PP P GY PQ G PPG G G
Sbjct: 41 PPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGY----PQPGGYPPPGGYPQHGGYPPAG 96
Query: 411 EPQSGRHSG 385
P S H G
Sbjct: 97 YPGSSGHQG 105
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 624 APYISVLCRTPPLQPGAQAHVPFVHVPPFMQMRRQPPCVLTG*GYKPP 481
AP++ V PPL P AH P V PP + P V PP
Sbjct: 430 APHLCVSRMPPPLVPTPPAHAPPVATPPTLATPVPTPPVTAPPADVPP 477
>10_08_0632 + 19442510-19442923
Length = 137
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 29 ASLALPDLTCRRT*ARLSSIRSPTGPSDTIPGSESCGMGDGAKMS 163
+SL +P LT T S + PT SDT P S S +G G S
Sbjct: 94 SSLPIPSLT-GHTILPSSHLSRPTASSDTYPTSPSSFLGSGKSTS 137
>09_04_0275 +
16302086-16303721,16304182-16304734,16305491-16305519,
16305639-16305897,16305969-16306110
Length = 872
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 344 PGWTSRPNSLLCIVPLCRPDCGSPGACIAPNICRCPGGVEAPSCGNGGLYPYPVRTQGGC 523
P T+R L + P PD + + E+PS G+ G+ P P R +G C
Sbjct: 108 PLHTTRSPLFLHLPPYDAPDADGASTDVIIGVLDTGVWPESPSFGDVGMGPVPSRWRGSC 167
>02_05_1225 +
35060642-35060815,35061254-35061802,35062284-35062348,
35062417-35062957,35063321-35064610
Length = 872
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 314 CRSRNSTHCCPGWTSRPNSLLCIVPLCRPDCGS 412
C N HC + P+S L +PLCR GS
Sbjct: 202 CSRDNDKHCSKLSCNPPSSPLDAIPLCRQTAGS 234
>10_08_0210 - 15874289-15875663,15878248-15879263
Length = 796
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 716 FSCRSRISDXERPWKHTHLSGRNTA--AAVQTWLL 618
F CR R SD + PW+ +L R + A WL+
Sbjct: 596 FGCRRRPSDADNPWRPHYLVSRTLSQYCAYLLWLV 630
>06_02_0035 + 10816723-10819497,10819964-10820011
Length = 940
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 332 THCCPGW---TSRPNSLLCIVPLCRPDCGSP 415
TH C GW T+RP C P CR DC SP
Sbjct: 367 THGCCGWMTATARP----C--PACRSDCASP 391
>03_05_0264 -
22510997-22511012,22511641-22511709,22511783-22511931,
22512235-22512330,22512853-22512981,22513216-22513494,
22513983-22514069
Length = 274
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +2
Query: 446 CPGGVEAPSCGNGGLYPYPVR--TQGGCRR 529
C V P+ G GG Y Y V T GGC R
Sbjct: 73 CLSHVTPPASGGGGCYGYRVTPPTSGGCSR 102
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = -1
Query: 591 PLQPGAQAHVPFVHVPPFMQMRRQPPCVLTG*GYKPPFPQEGASTPPGHRQMFGAIQAPG 412
P+ G VP+ P F M P V PPFP +TPPG + + G P
Sbjct: 478 PVPAGPMTAVPYNSYPVFPPMNY--PMV----NIPPPFPS-APNTPPGFQGLAGPFYGPP 530
Query: 411 EP 406
P
Sbjct: 531 YP 532
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 28.3 bits (60), Expect = 8.9
Identities = 34/124 (27%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Frame = -1
Query: 756 VHXAPSVSV*HGPXLLSISHLGPGETVETHASVRAQYSGRRADMAPYISVLCRTPPLQPG 577
+H AP S + P L++S L ++A A + C P +QP
Sbjct: 125 LHSAPGGSDCNVPIELNLSGLSVYSKSNEEVVLQANQVMAFASQKTF--GFCSKPHIQPP 182
Query: 576 AQAHVPFVHVPPFMQMRRQPPCVLTG*GYK-PPFPQEGASTPPGHRQMFGAIQAPGEPQS 400
P+ PP PP YK PP P + S PP ++ + Q P PQS
Sbjct: 183 I---FPYNSPPPSPYQYPSPPF-----NYKSPPLPNQ-FSPPPFNKFPPPSHQYPSPPQS 233
Query: 399 GRHS 388
HS
Sbjct: 234 SYHS 237
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 552 HVPPFMQMRRQPPCVLTG*GYKPPFPQEGASTP 454
+ PP + P TG GY PP P G TP
Sbjct: 509 YYPPTPSIGTSPSTPGTGGGYYPPSPSTGGYTP 541
>01_01_1029 - 8152182-8152589
Length = 135
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 431 PNICRCPGGVEAPSCGNGGLYPYPVRTQ-GGCRRICMNGGTCTNGTC 568
P++C PG A C + G C +C G TC G C
Sbjct: 58 PSVCLEPGSPGATCCKGACVDTGSSFAHCGSCNHVCKYGETCCGGHC 104
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 365 NSLLCIVPLCRPDCGSPGACIAP 433
NSL C PL P G+P C+ P
Sbjct: 426 NSLACPEPLTDPPAGAPCVCVLP 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,787,562
Number of Sequences: 37544
Number of extensions: 630451
Number of successful extensions: 2020
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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