Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P17
(906 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 37 0.001
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 34 0.007
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 29 0.19
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 29 0.19
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 29 0.19
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 29 0.19
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 24 5.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 9.6
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 36.7 bits (81), Expect = 0.001
Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = +2
Query: 398 PDCGSPGACIAPNICRCPGGVEAPSCGNGGLYPYPVRTQGGCRRICMNGGTCTNGTCACA 577
P C G CI C C G E C GG + G CT GTC+C
Sbjct: 533 PICSDRGECICGQ-CYCNPGFEGEHCECNECATIDGSICGG-----PDHGICTCGTCSCF 586
Query: 578 PGWSGGVLH-RTDM*GAMSARRPLYCARTDAC 670
WSG TD G + C+ C
Sbjct: 587 DSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC 618
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/48 (22%), Positives = 18/48 (37%)
Frame = +2
Query: 530 ICMNGGTCTNGTCACAPGWSGGVLHRTDM*GAMSARRPLYCARTDACV 673
+C G C G C+C + G D +P C+ + C+
Sbjct: 611 VCSGHGQCNCGRCSCDESFFGPFCETKD------GEQPALCSSYEDCI 652
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 33.9 bits (74), Expect = 0.007
Identities = 23/72 (31%), Positives = 27/72 (37%)
Frame = +2
Query: 359 RPNSLLCIVPLCRPDCGSPGACIAPNICRCPGGVEAPSCGNGGLYPYPVRTQGGCRRICM 538
RP LLC P G C+ C C G P+C + GG +C
Sbjct: 597 RPGGLLCSGP-------DHGRCVCGQ-CECREGWTGPACDCRASNETCMPPGGG--ELCS 646
Query: 539 NGGTCTNGTCAC 574
GTC GTC C
Sbjct: 647 GHGTCECGTCRC 658
Score = 26.6 bits (56), Expect = 1.0
Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Frame = +2
Query: 377 CIVPLCRPDCGSPGACIAPNICRCPGGVEAPSCGNGGLYP---YPVRTQGGCRRICMNGG 547
C + +C G C+ +C C +G + GG + G
Sbjct: 551 CRMSNASEECSGRGQCVC-GVCVCERRPNPDELIDGRYCECDNFSCDRPGGLLCSGPDHG 609
Query: 548 TCTNGTCACAPGWSG 592
C G C C GW+G
Sbjct: 610 RCVCGQCECREGWTG 624
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 29.1 bits (62), Expect = 0.19
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 551 CTNGTCACAPGWSGGVLH-RTDM*GAMSARRPLYCARTDAC 670
CT GTC+C WSG TD G + C+ C
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC 42
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/48 (22%), Positives = 18/48 (37%)
Frame = +2
Query: 530 ICMNGGTCTNGTCACAPGWSGGVLHRTDM*GAMSARRPLYCARTDACV 673
+C G C G C+C + G D +P C+ + C+
Sbjct: 35 VCSGHGQCNCGRCSCDESFFGPFCETKD------GEQPALCSSYEDCI 76
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 29.1 bits (62), Expect = 0.19
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 551 CTNGTCACAPGWSGGVLH-RTDM*GAMSARRPLYCARTDAC 670
CT GTC+C WSG TD G + C+ C
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC 42
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/48 (22%), Positives = 18/48 (37%)
Frame = +2
Query: 530 ICMNGGTCTNGTCACAPGWSGGVLHRTDM*GAMSARRPLYCARTDACV 673
+C G C G C+C + G D +P C+ + C+
Sbjct: 35 VCSGHGQCNCGRCSCDESFFGPFCETKD------GEQPALCSSYEDCI 76
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 29.1 bits (62), Expect = 0.19
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 551 CTNGTCACAPGWSGGVLH-RTDM*GAMSARRPLYCARTDAC 670
CT GTC+C WSG TD G + C+ C
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC 42
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/48 (22%), Positives = 18/48 (37%)
Frame = +2
Query: 530 ICMNGGTCTNGTCACAPGWSGGVLHRTDM*GAMSARRPLYCARTDACV 673
+C G C G C+C + G D +P C+ + C+
Sbjct: 35 VCSGHGQCNCGRCSCDESFFGPFCETKD------GEQPALCSSYEDCI 76
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 29.1 bits (62), Expect = 0.19
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 551 CTNGTCACAPGWSGGVLH-RTDM*GAMSARRPLYCARTDAC 670
CT GTC+C WSG TD G + C+ C
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC 42
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/48 (22%), Positives = 18/48 (37%)
Frame = +2
Query: 530 ICMNGGTCTNGTCACAPGWSGGVLHRTDM*GAMSARRPLYCARTDACV 673
+C G C G C+C + G D +P C+ + C+
Sbjct: 35 VCSGHGQCNCGRCSCDESFFGPFCETKD------GEQPALCSSYEDCI 76
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 24.2 bits (50), Expect = 5.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 764 GGPCTXRQAXPFSTDLFSCRSRISDXER 681
GGP R+A ++T++ CRS + R
Sbjct: 263 GGPYPRRRAYWWTTEIAQCRSHCIEARR 290
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 9.6
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 9/40 (22%)
Frame = +2
Query: 410 SPGACIAPNICRCPGGVEAPSCGN---------GGLYPYP 502
+PG P + R PG V P G GG+YP P
Sbjct: 182 NPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQP 221
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 930,319
Number of Sequences: 2352
Number of extensions: 21582
Number of successful extensions: 61
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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