Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P17
(906 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g42000.1 68415.m05195 plant EC metallothionein-like family 15... 33 0.20
At1g32190.1 68414.m03959 expressed protein 33 0.34
At1g22380.1 68414.m02799 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.79
At5g28615.1 68418.m03493 hypothetical protein 31 1.4
At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK... 30 1.8
At5g42620.1 68418.m05188 expressed protein 29 3.2
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ... 29 4.2
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ... 29 4.2
At1g61080.1 68414.m06877 proline-rich family protein 29 4.2
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 29 4.2
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 29 5.6
At3g28650.1 68416.m03576 DC1 domain-containing protein similar ... 29 5.6
At2g27100.1 68415.m03256 C2H2 zinc-finger protein SERRATE (SE) i... 29 5.6
At5g42080.1 68418.m05122 GTP-binding protein / phragmoplastin, p... 28 7.4
At5g26310.1 68418.m03145 UDP-glucoronosyl/UDP-glucosyl transfera... 28 7.4
At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger) fa... 28 9.8
At2g23240.1 68415.m02775 plant EC metallothionein-like family 15... 28 9.8
>At2g42000.1 68415.m05195 plant EC metallothionein-like family 15
protein 84 C-terminal residues identical to EC protein
homolog 1 (SP:P93746) {Arabidopsis thaliana}; contains
Pfam PF02068: Plant PEC family metallothionein profile;
Length = 115
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = +2
Query: 392 CRPDCGSPGACIAPNICRCPGGVEAPSCGNGGLYPYPVRTQGGCRRI-CMNGGTCTNGT- 565
C CG P C N CRC + S G+ G P GC C T T+
Sbjct: 44 CNDSCGCPSPCPGGNSCRC--RMREASAGDQGHMVCPCGEHCGCNPCNCPKTQTQTSAKG 101
Query: 566 CACAPG 583
C C G
Sbjct: 102 CTCGEG 107
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 32.7 bits (71), Expect = 0.34
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = +2
Query: 377 CIVPLCRPDCGSP-GACIAPNICRCPGGVEAPSCGNGGLYPYPVRTQGGCRRICMNGGTC 553
C LCRP C P C P+ C C G CG+ G + T GC C +C
Sbjct: 296 CCSGLCRPSCSCPKPRCPKPS-CSCGCG-----CGDCGCFKCSCPTLKGCFSCCKK-PSC 348
Query: 554 TNGTCACAPGWSGGVLHRTDM*GAMSARRPLYCARTDACVST 679
+ +C C P + S + L C T+ C S+
Sbjct: 349 VS-SC-CCPTFKCSSCFGKPKCPKCSCWKCLKCPDTECCRSS 388
>At1g22380.1 68414.m02799 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 467
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 263 QRMLDDRAPSQFVGSHVCRSRNSTHCCPGWTSRPNSLLCIVPLCRPDCG 409
+RML P + V SH THC GW S SL C VP+ + G
Sbjct: 356 RRMLTSWCPQEKVLSHPAVGGFLTHC--GWNSTLESLSCGVPMVGIEIG 402
>At5g28615.1 68418.m03493 hypothetical protein
Length = 149
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 677 WKHTHLSGRNTAAAVQTWLLTYRFCAELP 591
WK H + N +A +TWL Y F A +P
Sbjct: 87 WKADHHAPSNIFSAAKTWLALYTFAATVP 115
>At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK,
putative similar to cyclin dependent kinase C
[Lycopersicon esculentum] gi|15215944|emb|CAC51391
Length = 505
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Frame = -1
Query: 600 RTPPLQPGAQAH-VPFVHVPPFMQMRRQPPCVLTG*GY----KPPFPQEGASTPPGHRQM 436
R PPLQ G Q+H P P PP V G + KP P PP Q
Sbjct: 376 RLPPLQHGGQSHAAPHWPAGPNHPTNNAPPQVPAGPSHNFYGKPRGPPGPNRYPPSGNQS 435
Query: 435 FGAIQAPGEPQSGRH 391
G Q+ G SG +
Sbjct: 436 GGYNQSRGGYSSGSY 450
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 392 CRPDCGSPGACIAPNICRCPGGVEAPSCGNGGLYPYPVRTQGGCRRIC-MNGGTCTNGTC 568
C +C G C +C C G C + C C ++GG C NG C
Sbjct: 634 CPNNCNGHGKCTTQGVCICENGFTGIDC-----------STAICDEQCSLHGGVCDNGVC 682
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 503 VRTQGGCRRICMNGGTCTNGTCACAPGWSG 592
V G C C G C +G C C G+ G
Sbjct: 597 VSVLGQCPNSCNFNGDCVDGKCRCLLGYHG 626
>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 791
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 503 VRTQGGCRRICMNGGTCTNGTCACAPGWSG 592
+ Q C C G C G C C GW G
Sbjct: 269 IPVQCTCVNQCSGHGKCRGGFCQCDKGWFG 298
>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 793
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 503 VRTQGGCRRICMNGGTCTNGTCACAPGWSG 592
+ Q C C G C G C C GW G
Sbjct: 271 IPVQCTCVNQCSGHGKCRGGFCQCDKGWFG 300
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Frame = -1
Query: 594 PPLQPGAQAHVPFVHVPPFMQMRRQPPCV---LTG*GYKPPFP-----QEGASTPPGHRQ 439
PP PG QA P PP PP + +G G PP P GA+ PP
Sbjct: 552 PPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPP 611
Query: 438 MFGAIQAPGEP 406
M A A G P
Sbjct: 612 MAMANGAAGPP 622
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/68 (27%), Positives = 23/68 (33%)
Frame = -1
Query: 594 PPLQPGAQAHVPFVHVPPFMQMRRQPPCVLTG*GYKPPFPQEGASTPPGHRQMFGAIQAP 415
P QP + F PP Q Q P + + P FP + S P Q P
Sbjct: 381 PNQQPTGRFDPQFPSQPPRPQFPNQAPNQQSTGRFNPQFPNQRPSPPQSRFPDQAPNQQP 440
Query: 414 GEPQSGRH 391
P RH
Sbjct: 441 SGPSPNRH 448
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = +1
Query: 382 RPTMPTRLRLARSLYSSEHLSMSRRSRGAFLWEW-RFIPLSSQDTRRLSTHLHERRHVYE 558
+P R R + L S RS+G W+W PL ++ R S E
Sbjct: 1065 KPEETNRSRSSSELQKLSSTSSKVRSKGNVFWKWLGCFPLQPKNLRSRSRRTTALEEALE 1124
Query: 559 RHMRLRPRLERGSSAQNRYVRS 624
++ R +LE Q + S
Sbjct: 1125 EALKEREKLEDTRELQIALIES 1146
>At3g28650.1 68416.m03576 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 665
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 164 NSSWHHHPCHRIRCRV 117
N SWHHHP H I R+
Sbjct: 120 NFSWHHHPLHFISFRL 135
>At2g27100.1 68415.m03256 C2H2 zinc-finger protein SERRATE (SE)
identical to C2H2 zinc-finger protein SERRATE
GI:14486602 from [Arabidopsis thaliana]
Length = 720
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = -1
Query: 555 VHVPPFMQMRRQPPCVLTG*GYKPPFPQEGASTPPGHRQMFGAIQAPGEPQSGRHSG 385
VHVPPF+ PP ++ G P P A P QMF P P G G
Sbjct: 626 VHVPPFLSDINPPPMLMPVPGAGPLGPFVPA-PPEVAMQMFRDPSGPNPPFEGSGRG 681
>At5g42080.1 68418.m05122 GTP-binding protein / phragmoplastin,
putative strong similarity to GTP-binding protein
[Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A
[Glycine max] GI:1218004; contains Pfam profiles
PF01031: Dynamin central region, PF00350: Dynamin family
Length = 610
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 487 FIPLSSQDTRRLSTHLHERRHVYERHMRLRPRLERGSSAQN 609
F L + D +RLS+ L+E + ER + RLE +AQ+
Sbjct: 561 FAELGTMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQS 601
>At5g26310.1 68418.m03145 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 481
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 269 MLDDRAPSQFVGSHVCRSRNSTHCCPGWTSRPNSLLCIVPL 391
M+ AP + +H THC GW+S S+LC VP+
Sbjct: 341 MIPSWAPQAEILAHQAVGGFLTHC--GWSSTLESVLCGVPM 379
>At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 704
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 18 CRREHRSLYLTLPVAVPERGYRPSGHPRD 104
CR + + + P A P+ G +P G PRD
Sbjct: 115 CRAKWNEIPIQSPNAKPKSGVKPIGRPRD 143
>At2g23240.1 68415.m02775 plant EC metallothionein-like family 15
protein identical to EC protein homolog 2 (SP:Q42377)
{Arabidopsis thaliana}; identical to an EST:
GB:X92116:ATECPRHOM; contains a vertebrate
metallothionein signature (PS00203); contains Pfam
profile PF02068: Plant PEC family metallothionein
Length = 85
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +2
Query: 392 CRPDCGSPGACIAPNICRCPGGVEAPSCGNGGLYPYPVRTQGGCRRI-CMNGGTCTNGT- 565
C CG P C CRC EA S G+ P GC C T T+
Sbjct: 13 CNDRCGCPSPCPGGESCRCKMMSEA-SGGDQEHNTCPCGEHCGCNPCNCPKTQTQTSAKG 71
Query: 566 CACAPG 583
C C G
Sbjct: 72 CTCGEG 77
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,563,616
Number of Sequences: 28952
Number of extensions: 409635
Number of successful extensions: 1189
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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