Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P16
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0533 + 22997139-22997683,22998024-22998073,22998142-229981... 35 0.076
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 35 0.100
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 33 0.30
06_03_1338 - 29440373-29440534,29440993-29441083,29441799-294419... 31 1.6
04_04_0283 - 24132112-24132189,24132227-24132745 31 1.6
09_06_0362 + 22545891-22546541 29 3.8
07_01_0463 + 3502708-3503535 29 3.8
01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216... 29 3.8
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 29 3.8
09_04_0418 - 17406313-17407419 29 5.0
05_01_0426 + 3364341-3364713,3364823-3364963,3365389-3365510,336... 29 6.6
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 29 6.6
12_01_0319 + 2440129-2440661,2440875-2440902 28 8.7
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 28 8.7
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 28 8.7
>01_05_0533 +
22997139-22997683,22998024-22998073,22998142-22998194,
22998286-22998303
Length = 221
Score = 35.1 bits (77), Expect = 0.076
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2
Query: 242 PILPFGFTMRCLKAYASPNMSGNSKDSKDDKENNQSVLPNTTS--TPSDTNGFLKVSQSQ 415
P + FG L+ + P +S + +E++ S T T ++ G LK + +
Sbjct: 70 PFICFGRAAAGLEGASPPKLSSGNTSGSSSEESSASANEGTNGSLTGNEKKGCLKSNSRR 129
Query: 416 EGISEGPSSFEEVSPSD-LAELQAHKSGSERRK 511
+ + E P + L E+Q KSG ERRK
Sbjct: 130 DSLEHCIVVSEGEEPRESLEEVQTLKSGMERRK 162
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 34.7 bits (76), Expect = 0.100
Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 7/158 (4%)
Frame = +2
Query: 344 QSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSPSDLAE--LQAHKSGSERRKSS 517
QS+ P T PSD SQS +E ++V PS+ E K E K +
Sbjct: 414 QSIEPEETKGPSDVKAEEVSSQSNVAFAEDAVQ-DKVIPSEPPEDIRPVKKLEQEETKEA 472
Query: 518 DTTISAASLQSEHTVTGTTPPEDK---SQQYVTDFLERYVLDSDTDSEGRKLNRAAN--N 682
D AS ++ + ED S+Q T+ E S+ D EG + + +
Sbjct: 473 D----EASNETNSAIFSDLNQEDSIVASKQLETELAEEAAAFSNLDQEGGIADSESQVAD 528
Query: 683 DGSQREIE*ENSSTLVAEKPLTVPTEXXGPDNXMXIKP 796
+EIE + + + P V TE DN +P
Sbjct: 529 LEEAKEIEATETEEITHQPPAAVSTELPKEDNSTRSEP 566
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 33.1 bits (72), Expect = 0.30
Identities = 35/110 (31%), Positives = 51/110 (46%)
Frame = +2
Query: 356 PNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSPSDLAELQAHKSGSERRKSSDTTISA 535
PN TST + +NG + + + GPSS ++ AEL S + K +D IS
Sbjct: 315 PNNTSTSAVSNGCALIDRVKS--PSGPSSSDK-----KAEL---PSDDNQAKDTDDLISG 364
Query: 536 ASLQSEHTVTGTTPPEDKSQQYVTDFLERYVLDSDTDSEGRKLNRAANND 685
A E TT PE S + + + LD+ TDSE ++A NN+
Sbjct: 365 AKEIPEPI---TTEPEKPSDH---NLKKSHKLDTSTDSEVVDHSKAVNNN 408
>06_03_1338 -
29440373-29440534,29440993-29441083,29441799-29441942,
29442094-29442159,29442589-29442729,29443077-29443178,
29443264-29443338,29443469-29443549,29443670-29443739,
29444063-29444139,29444392-29444660
Length = 425
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 8 LEEVYYAYCWLLNNFKTVGTTGKRIVFAGDSAGANLVAACTV 133
+E+ ++ NN + G +RI G SAGA+ +AACT+
Sbjct: 202 VEDASQGIAFVCNNIASYGGDPERIYLVGQSAGAH-IAACTL 242
>04_04_0283 - 24132112-24132189,24132227-24132745
Length = 198
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 332 KENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSPSDLAELQAHKSGSERRK 511
+EN Q L T PS+ GF K S++G ++ P+ + + +L E + S + R+
Sbjct: 110 EENLQQGLSRTGHHPSEIKGFSKKENSEDGWTQEPNPGQ--AKDNLGEAASRVSEQQDRR 167
Query: 512 SSDTTI 529
S +++
Sbjct: 168 SGASSL 173
>09_06_0362 + 22545891-22546541
Length = 216
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 461 SDLAELQAHKSGSERRKSSDTT---ISAASLQSEHTVTGTTPPEDKSQQYV 604
+D+A+ + S S SSD + SAA+ + EH + PP + QQ +
Sbjct: 16 ADMADSSSSSSSSSSSSSSDDSDMRASAAAAEPEHRRSPAPPPPPRQQQLI 66
>07_01_0463 + 3502708-3503535
Length = 275
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/96 (23%), Positives = 36/96 (37%)
Frame = +2
Query: 311 SKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSPSDLAELQAHK 490
SKDSK DKEN +S + D G K + +E + EE + + K
Sbjct: 76 SKDSKKDKENKKSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDEEEGK 135
Query: 491 SGSERRKSSDTTISAASLQSEHTVTGTTPPEDKSQQ 598
E++K D + + G E K ++
Sbjct: 136 K-KEKKKDKDGDEKEGKKEKKKDKDGDEEEEGKKKE 170
>01_07_0370 -
43119049-43120278,43121376-43121420,43121421-43121662,
43121908-43122686,43123123-43123463,43123565-43123785,
43123866-43124176,43124257-43124516,43124836-43124918,
43124940-43125036,43125132-43125305,43126215-43126592
Length = 1386
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 275 LKAYASPNMSGNSKDSKDDKENNQSVLPNTTSTPS--DTNGFLKVSQSQEGISEGPSSFE 448
++ Y P+ +DS +S PN + +PS T+GFL S + S
Sbjct: 625 IRNYKEPSSFQIERDSSASHSFQESSSPNMSKSPSLQKTHGFLAFRNSDANHNSHESPNI 684
Query: 449 EVSPSD-LAELQAHKSGSERRKS 514
+ PS+ +AE + SER S
Sbjct: 685 QSPPSEQMAETRLPTVASERAPS 707
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 32 CWLLNNF-KTVGTTGKRIVFAGDSAGANLVAACT 130
CW+LNNF +VGT + AG +AG V CT
Sbjct: 112 CWILNNFAPSVGTGPVVDLLAGSAAGGTAV-LCT 144
>09_04_0418 - 17406313-17407419
Length = 368
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 77 RIVFAGDSAGANLVAACTVKILSTGL 154
R+V AGDSAGAN+ +++ G+
Sbjct: 205 RVVLAGDSAGANMAHNAAIRLRKEGI 230
>05_01_0426 +
3364341-3364713,3364823-3364963,3365389-3365510,
3365939-3366202,3366289-3366419,3366819-3367026,
3367121-3367186,3367276-3367353,3368038-3368079
Length = 474
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 314 KDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSP 460
+D KDD + + LP TPSD N L +S+S +S PS + +SP
Sbjct: 135 RDKKDDP-STAAALP----TPSDKNMVLGMSRSIVRVSSPPSEGKLISP 178
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 314 KDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSP 460
+D KDD + + LP TPSD N L +S+S +S PS + +SP
Sbjct: 137 RDKKDDP-STAAALP----TPSDKNMVLGMSRSIVRVSSPPSEGKLISP 180
>12_01_0319 + 2440129-2440661,2440875-2440902
Length = 186
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 461 SDLA--ELQAHKSGSERRKSSDTTISAASLQSEHTVTGTTPP 580
+DLA ELQ+ GS R S +T+S A+ S T +G PP
Sbjct: 9 ADLAADELQSLSFGSSERSRSGSTVSTATTVST-TTSGPPPP 49
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 28.3 bits (60), Expect = 8.7
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
Frame = +2
Query: 266 MRCLKAYASPNMSGNSKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPS-S 442
+RC A+P M+ S KE+ + D +G L+V++ + G S S
Sbjct: 613 LRCRSGMAAPAMARRSSSCSSSKEHTWMLF-----LGGDADGKLRVARELASLVFGSSKS 667
Query: 443 FEEVSPSDLAELQAHKSGSERRKSSDTTISAASLQSEHTVTGTTPPEDKSQQYV 604
F + + A S S +SS +T + T TT + Q ++
Sbjct: 668 FVSIGGAANASPPPSSSSSSPARSSGSTEQPHRSKRPWAETTTTTTSGRDQDHL 721
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 32 CWLLNNFKTVGTTGKRIVFAGDSAGANLVAACT 130
CW+LNN ++GT + AG ++G V CT
Sbjct: 110 CWILNNCPSLGTGPLVDLLAGSASGGTAV-LCT 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,994,785
Number of Sequences: 37544
Number of extensions: 458333
Number of successful extensions: 1606
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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