Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P15
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 97 2e-20
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 81 1e-15
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 66 3e-11
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 55 8e-08
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 45 6e-05
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 45 6e-05
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 38 0.007
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.27
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.47
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 30 1.9
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 30 1.9
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 5.8
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 29 5.8
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 5.8
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical p... 28 7.7
U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical pr... 28 7.7
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.7
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Frame = +2
Query: 125 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 304
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 305 VPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMG 478
VPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ+A +
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVV 135
Query: 479 QWFRKWRIDINPTKSTAVLFKRGR 550
W + ++ +N +K+ V + R
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRR 159
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 80.6 bits (190), Expect = 1e-15
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 3/228 (1%)
Frame = +2
Query: 41 HSCVHQVHRLTEHILLGLNRRKPIPTGALF--FDIAKAFDKVWHNGLIYKLYN-MGVPDR 211
HS V ++T I+ GLN + P P A+ D+ AFDKV L L G+ +
Sbjct: 443 HSTTTAVIQVTNDIIGGLNMKNP-PERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPK 501
Query: 212 LVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 391
+ L + +YL R R + S+ + GVPQGS +SP LF+ Y+ D+P +T L
Sbjct: 502 IKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLIS 561
Query: 392 FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 571
+ADD +I +K ++Q + ++ ++ + I+ KST +F
Sbjct: 562 YADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVFSCD-------- 613
Query: 572 IPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHI 715
P P I D PIP K LG+TL++ + H+
Sbjct: 614 ---PKEHKTKP-----DIYWMDDPIPVINAPKLLGITLNTMTGTKDHV 653
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 66.1 bits (154), Expect = 3e-11
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Frame = +2
Query: 143 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGS 319
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 320 ALSPLLFSLYINDIPRS--PETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRK 493
P LF ++IN + S P + FADD +Y L +QT + W
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY--SHSPPL----IQTTIDLITTWSEN 115
Query: 494 WRIDINPTKSTAVLFKRGRPPNTTLSI-PLPTRRVNNPAPAVR----------------- 619
++ + K+ A+L K G N L + PL V A R
Sbjct: 116 NKLPLAVHKA-ALLNKLGFSSNCVLLLAPLINSLVCRLLAASRTGVSTVAHSKTCLLHLG 174
Query: 620 ---PITMYD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTV 724
P T+Y +P +P + LG+ DS++TF+PHIK +
Sbjct: 175 KKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI 215
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 54.8 bits (126), Expect = 8e-08
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +2
Query: 182 KLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYIND 358
KL G+ +++L NR+F ++ S+ + +++GVPQGS PLLF L+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 359 --IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAV 532
I +P +++ FADD I+++ +Q + + W + + + PTKS A+
Sbjct: 899 LLIDLAPTINISCFADDVKIFHTD------PTIIQNSIDIIVSWSKLNELPLAPTKS-AL 951
Query: 533 LFKRGRPPNTTLSI 574
L R N + S+
Sbjct: 952 LALGTRNKNQSYSV 965
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Frame = +2
Query: 44 SCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 223
S + +H L LL + R IP +F D KAFD V H + L G + +
Sbjct: 664 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 721
Query: 224 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPR 367
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 722 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Frame = +2
Query: 44 SCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 223
S + +H L LL + R IP +F D KAFD V H + L G + +
Sbjct: 403 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 460
Query: 224 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPR 367
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 461 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 44.8 bits (101), Expect = 8e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Frame = +2
Query: 44 SCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 223
S + +H L LL + R IP +F D KAFD V H + L G + +
Sbjct: 493 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDL 550
Query: 224 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPR 367
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 551 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 597
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +2
Query: 125 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTA 301
+ F ++ AFDKV H LI KL + V L R +S ++F +V +H
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 302 GVPQGSALSPLLFSLYIN----DIPRSPETHLALFADDTAIY 415
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +2
Query: 125 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 304
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 305 VPQGSALSPLLFSLYINDIPR 367
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 521 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 658
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 521 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 658
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 566 LSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 736
++ PLP+ P VRP T +D IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 539 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 658
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 360 ISLIYKLNSNGERAEPCGTPAVT*RGRER 274
ISL S GER +PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 581 PTRRVNNPAPAVRPITMYDQPIPW 652
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.8
Identities = 36/162 (22%), Positives = 58/162 (35%)
Frame = +3
Query: 159 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYY 338
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 337 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 396
Query: 339 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 518
+ + P S M P S+T G + I +GS S T
Sbjct: 397 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 456
Query: 519 KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSP 644
+Q G +L T ++ S S P S T+ P
Sbjct: 457 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEP 496
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical protein
K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.8
Identities = 36/162 (22%), Positives = 58/162 (35%)
Frame = +3
Query: 159 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYY 338
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 544 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 603
Query: 339 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 518
+ + P S M P S+T G + I +GS S T
Sbjct: 604 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 663
Query: 519 KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSP 644
+Q G +L T ++ S S P S T+ P
Sbjct: 664 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEP 703
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 5.8
Identities = 36/162 (22%), Positives = 58/162 (35%)
Frame = +3
Query: 159 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYY 338
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 544 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 603
Query: 339 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 518
+ + P S M P S+T G + I +GS S T
Sbjct: 604 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 663
Query: 519 KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSP 644
+Q G +L T ++ S S P S T+ P
Sbjct: 664 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEP 703
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 28.7 bits (61), Expect = 5.8
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +3
Query: 201 CQTGS-CSSYETTCRT-VRSDIESRE--RVPGPVTSQP-ESRKAPPSPRYYSVCISTIYP 365
C GS C S C ++D+ + E VP P TSQP + PP+ V I T+ P
Sbjct: 306 CGKGSICDSVIPVCVCPAQTDLSNGECISVPAP-TSQPVQVMTPPPTLPPVQVPIQTLPP 364
Query: 366 GLRRPIWRSSPMT-PPSTTRVGRRRCFIDDFRPQLPPW 476
R P +T PP T V + F RP +P +
Sbjct: 365 QTRPPQLPPVQITQPPIQTPV--QPIFFQTTRPPMPTY 400
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.7 bits (61), Expect = 5.8
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +3
Query: 201 CQTGS-CSSYETTCRT-VRSDIESRE--RVPGPVTSQP-ESRKAPPSPRYYSVCISTIYP 365
C GS C S C ++D+ + E VP P TSQP + PP+ V I T+ P
Sbjct: 403 CGKGSICDSVIPVCVCPAQTDLSNGECISVPAP-TSQPVQVMTPPPTLPPVQVPIQTLPP 461
Query: 366 GLRRPIWRSSPMT-PPSTTRVGRRRCFIDDFRPQLPPW 476
R P +T PP T V + F RP +P +
Sbjct: 462 QTRPPQLPPVQITQPPIQTPV--QPIFFQTTRPPMPTY 497
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 285 PVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGR 431
P T+ + +P + +S +P LRR +S P PP+TT R
Sbjct: 131 PTTTTTPAPTTTTTPNFLEKSLSMFFPSLRRKP-QSIPTLPPTTTPTPR 178
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 597 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 472
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 707
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 747 RMKAARSRTVLMWGRNVI-LLSRVTPKYLTFGAHGMGWSYIVIGRTAGAGL 598
RMK+++ ++ L W + R+TP Y+ F + +S V G TA AGL
Sbjct: 340 RMKSSQIKSPLTWILFYVHRYLRLTPPYMIFLGFYIVYSEYVQGPTAAAGL 390
>U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical
protein K05F1.9 protein.
Length = 218
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 285 PVTSQPESRKAPPSPRYYSVCISTIYPGLR-RPIWRSSPMTPPSTTRVGRRRCFIDDFRP 461
P T PE+ K YY +T+ + R +W+++ + G RR FID +P
Sbjct: 87 PATVIPENNKHY-FVVYYIKAANTVKEKIPVRDLWKAAASSE------GTRRVFIDFKKP 139
Query: 462 QLPPWDSGSG 491
+LPP ++ G
Sbjct: 140 ELPPTEAEDG 149
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 627 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 484
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,563,734
Number of Sequences: 27780
Number of extensions: 558161
Number of successful extensions: 1933
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -