Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P14
(857 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 56 4e-08
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 54 2e-07
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 52 6e-07
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 4e-05
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 44 1e-04
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 43 4e-04
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 6e-04
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 40 0.002
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.006
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.006
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 38 0.008
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.010
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 38 0.010
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 38 0.010
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.014
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 37 0.018
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 36 0.042
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.69
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 31 0.91
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.2
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.1
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 3.7
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.8
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 4.8
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 28 8.5
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 28 8.5
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 8.5
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 28 8.5
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 28 8.5
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 56.0 bits (129), Expect = 4e-08
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 382
LTL+ H ++E ++ L+ W D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 383 NAAATTAG--DYALRARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCTFQVRF 544
N+A + +R +++ G V W+ L + T M + ++P D Q C ++RF
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQAC--ELRF 134
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 305 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 463
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 464 LDIGTPISMQLDNWPNDMQTC 526
I + + + +P D+Q+C
Sbjct: 155 AIIKSECKIDVRFFPFDVQSC 175
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLN 385
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 52.0 bits (119), Expect = 6e-07
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +2
Query: 224 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 397
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 398 TAGD---YALRARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCTFQ 535
++G+ + + + ++G+V W+ + + + + + N+P D Q C +
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLE 307
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 52.0 bits (119), Expect = 6e-07
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +2
Query: 284 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 448
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 449 SWIKRLDIGTPISMQLDNWPNDMQTCTFQ 535
W+ + T + + +P D Q+CT +
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLK 207
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +2
Query: 251 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 421
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 422 ---ARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
V +NG V W+ + + + M + ++P D Q C
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYC 129
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 430
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 431 SNNGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
S++GS +W+ I T + + +P D+Q C
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYC 117
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = +2
Query: 215 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 388
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 389 AATTAG---DYALRARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCTFQ 535
T AG Y S++G+ W + ++ + +P D Q C+ +
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLK 217
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 44.0 bits (99), Expect = 2e-04
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Frame = +2
Query: 47 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRH 226
M+ + LLPFL S E+ +++ L Y++E+ P V+N + +
Sbjct: 1 MAPLLLSLLPFLFVFPSLSVDHTEDVEHR--LLNDLFKDYNKEARP----VLNKSEAI-- 52
Query: 227 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAAT 397
E + + + + W++ L+W+ +G T + V+ +W+PD+VL +
Sbjct: 53 ----EVQFDMAYAQLINLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGE 108
Query: 398 TAGDYAL--RARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
T Y RA + +NG W +I + ++ + +P D Q C
Sbjct: 109 TGAIYKFDTRATIMHNGYTEWFAPTEIHSICAIDITYFPFDEQFC 153
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 152 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 316
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 317 EW-GCSTWLVSSERLWRPDVVLLNAA 391
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 278 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 391
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Frame = +2
Query: 257 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 409
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 410 ----YALRARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCTFQ 535
Y + + +NG SW+ + + +P D Q CT +
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLE 121
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN---AAATTAGDYAL---RARVSNNGS 445
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 446 VSWIKRLDIGTPISMQLDNWPNDMQTCT 529
V WI + + ++++ WP D Q CT
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCT 491
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +2
Query: 254 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 418
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 419 RARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
+S +GS +W + + + +P D QTC
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTC 134
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 436
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 437 NGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
+G+V W+ I + + + +P D Q C
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLC 636
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 448
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 449 SWIKRLDIGTPISMQLDNWPNDMQTCTFQ 535
W+ + + ++++ +P D Q C+ +
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLK 128
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +2
Query: 170 RESPPDS---KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 337
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 338 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDIGTPISM 490
+ +++W+PD L N AG D +L RV NG+V++ R+ M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 491 QLDNWPNDMQTC 526
+ N+P D Q+C
Sbjct: 187 EFRNFPMDRQSC 198
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 436
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 437 NGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
+G+ +W+ T + + +P D Q C
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQEC 133
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Frame = +2
Query: 275 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 439
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 440 GSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
G + W + T + + +P D QTC
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTC 176
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 38.3 bits (85), Expect = 0.008
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Frame = +2
Query: 275 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 433
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 434 NNGSVSWIKRLDIGTPISMQLDNWPNDMQTCTFQ 535
N G W + SM L WP D QTC +
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMK 216
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 251 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 385
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCT 529
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 439
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 440 GSVSWIKRLDIGTPISMQLDNWPNDMQ 520
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSN 436
+ + W + L+W+ +G T + V R+WRPD++L NA T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 437 NGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
+GS W+ + + + +P D Q+C
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSC 164
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 280
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 281 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +2
Query: 284 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 442
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 443 SVSWIKRLDIGTPISMQLDNWPNDMQTCT 529
V W+ + +++ WP D Q CT
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCT 90
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 35.9 bits (79), Expect = 0.042
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = +2
Query: 140 MIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSW 307
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 308 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDIGTPIS 487
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 488 MQLDNWPNDMQTCT 529
M L N+P D+Q C+
Sbjct: 195 MDLFNFPLDVQRCS 208
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 33.1 bits (72), Expect = 0.30
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 445
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 446 VSWIKRLDIGTPISMQLDNWPNDMQTC 526
V + + I M+L ++P D Q C
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQC 95
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 367
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 368 DVVLLN 385
D+VL N
Sbjct: 127 DIVLYN 132
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.5 bits (68), Expect = 0.91
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = +2
Query: 164 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 328
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 329 STWLVSSERLWRPDVVLLNAAATTAGD---YALRARVSNNGSVSWIKRLDIGTPISMQLD 499
+ E++WRPD NA A + D + + + + GS + +G S L+
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVDVLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNLE 132
Query: 500 NWP 508
WP
Sbjct: 133 FWP 135
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 31.5 bits (68), Expect = 0.91
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = +2
Query: 164 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 328
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 329 STWLVSSERLWRPDVVLLNAAATTAGD---YALRARVSNNGSVSWIKRLDIGTPISMQLD 499
+ E++WRPD NA A + D + + + + GS + +G S L+
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVDVLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNLE 132
Query: 500 NWP 508
WP
Sbjct: 133 FWP 135
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 313
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 314 GEWG-CSTWLVSSERLWRPDVVL 379
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMN 283
E A + + +D L ++ D+ P +VV + +++ + I + +++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 284 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 448
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 449 SWIKRLDIGTPISMQLDNWPNDMQTCTFQV 538
R+ + M L +P D QTC +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNI 188
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 284 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 385
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTC 526
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
Query: 527 TFQV 538
+
Sbjct: 98 NLSI 101
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 332 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 442
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 385
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 241 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 137
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 428 VSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCT 529
V+N G V W + S+++ WP D+Q C+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 54
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 263 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQ 520
+ +W P NA D + NG V + RL I + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 521 TC 526
C
Sbjct: 92 VC 93
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 8.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 286
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 287 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 385
D R N E + ++ W PD N
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 428 VSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCT 529
V+N G V W + S+++ WP D+Q C+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 135
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 425 RVSNNGSVSWIKRLDIGTPISMQLDNWPNDMQTCTFQV 538
R+ NG++ + RL + + M L N+P D Q C ++
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLKM 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,839,554
Number of Sequences: 59808
Number of extensions: 478369
Number of successful extensions: 1328
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -