Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P13
(861 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 35 0.098
SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 32 0.52
SB_45259| Best HMM Match : CH (HMM E-Value=0.00071) 31 0.91
SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9) 31 0.91
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_58854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_34248| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42) 31 1.2
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 30 2.1
SB_57176| Best HMM Match : Pentapeptide_2 (HMM E-Value=1.4) 29 3.7
SB_49433| Best HMM Match : DUF1327 (HMM E-Value=3.1) 29 3.7
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_45233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 4.9
SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66) 29 4.9
SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34) 29 6.4
SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_27968| Best HMM Match : Calx-beta (HMM E-Value=0.0037) 28 8.5
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 28 8.5
SB_15946| Best HMM Match : Extensin_2 (HMM E-Value=1) 28 8.5
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 28 8.5
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 34.7 bits (76), Expect = 0.098
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Frame = +3
Query: 354 TGWAATAEVSPPATCADSQDILP-----PCKLLTATNLTSHHANYNFTGSTSLTRCYSHT 518
T A T +P T A + P P T N + +Y+ S YS +
Sbjct: 32 TNTALTTTTAPTTTTAPTTTTAPTTTTAPTTTTTPNNDYNTSDDYSTNNDYSTNNDYSTS 91
Query: 519 EEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVTTTSDVSIFLPHGN 695
+E + +T + H++ L +H+R +H+R RL + TTT+ + P N
Sbjct: 92 DEYSTNDDYNTKQRLQHQRRLQHQQRLQHQRRLQHQR--RLQHKTTTTAPTTTTAPATN 148
>SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 660
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 507 YSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVTTTSDVSIFLP 686
YS E+ + + + H + R+ LHPP H RI H G + ++V + F P
Sbjct: 359 YSDNEDI-KVLTGNQNPHHVMRQELHPPITARHVRIHPHSWNGSICMRVELIGNSVCFSP 417
Query: 687 HG 692
G
Sbjct: 418 LG 419
>SB_45259| Best HMM Match : CH (HMM E-Value=0.00071)
Length = 1032
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 594 EPEHRRIA-RHERTGRLILQVTTTSDVSIFLPHGNLLAFLFACLLE 728
EP RI RH +GR ++ + SDV + P ++ +CL E
Sbjct: 84 EPSSSRILPRHIPSGRYVINILDKSDVDVEKPDKKMITMYLSCLYE 129
>SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9)
Length = 229
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 454 PATTQTTILRVPPLLHDVTLTLRKPTANTCQARTSTHFTGKTC 582
P+ + + PP + DV T +PT TC + T T KTC
Sbjct: 141 PSHARRVLSLSPPYMQDVYFTCHRPTCKTCTSPV-TALTCKTC 182
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 31.5 bits (68), Expect = 0.91
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 438 TATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIA 617
T+ + TS H S TR + + H SS HK + H ++ H + E +
Sbjct: 51 TSRHETSRHETSRHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHE---TS 107
Query: 618 RHERT 632
RHER+
Sbjct: 108 RHERS 112
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 453 TSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 626
TS H S T + + R+H S HK + H K+ H + H R +RHE
Sbjct: 91 TSRHGRSRHKTSRHETSRHERSRHETRQHERSRHKTSRHEKSRHETS--RHER-SRHE 145
>SB_58854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +3
Query: 420 PPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNL-HPPAE 596
PP K T T T +T + HTE A+R + H HR + P E
Sbjct: 7 PPHKTSTQNQHTKTTPQNQHTKTTPQNQ---HTEPAHRTSTQNQHTEPAHRTTTQNQPTE 63
Query: 597 PEHRRIARHERT 632
P HR ++ T
Sbjct: 64 PAHRTTTQNHHT 75
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 501 RCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 626
+CY++ R H +S HK LH++ +H EPEH + + E
Sbjct: 485 KCYTYFASFKR-HQASMHKKPLHKEVMH--NEPEHNKPFKQE 523
>SB_34248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 519 EEANREHLSSTHKHALHRKNLHPPAEPEHRRI 614
EE NR+ L+ H L LHPPA+P R +
Sbjct: 56 EEVNRDALTPPSPHPLPVIQLHPPAQPLERSL 87
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 453 TSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERT 632
TS H S TR + + H SS HK + H ++ H + E +RHER+
Sbjct: 16 TSRHETSRHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHE---TSRHERS 72
>SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42)
Length = 495
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 519 EEANREHLSSTHKHALHRKNLHPPAEPEHRRI 614
EE NR+ L+ H L LHPPA+P R +
Sbjct: 347 EEVNRDALTPPSPHPLPVIQLHPPAQPLERSL 378
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 405 SQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLH 584
S + PP L +++ S H + + ++ R H +R LS+ H+ + H + H
Sbjct: 214 SSSLSPPSSLQSSS--PSRHLHCHRPRLSNHHRPSRH-HHCHRPRLSNHHRPSRHL-HCH 269
Query: 585 PPAEPEHRRIARHERTGRLILQV 653
P H R++RH + RL L +
Sbjct: 270 CPRLSNHHRLSRHLHSNRLRLSI 292
>SB_57176| Best HMM Match : Pentapeptide_2 (HMM E-Value=1.4)
Length = 270
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 233 VQPERGGSNIGSPCWRRGLVVWRTRRPASVTVEAICPVLADWVGRDRGSLTSG 391
V+ E G ++ +G+VV R R SV VE +A W GR +GS+ G
Sbjct: 144 VEGEEGKGSVVEGEGGKGIVVEREREKGSV-VEGEERKVASWRGRRKGSVVEG 195
>SB_49433| Best HMM Match : DUF1327 (HMM E-Value=3.1)
Length = 728
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 724 SKQANKKASKFPWGRKIDTSEVVVTCKIRR 635
+K+A +K PW +KID +++ +IRR
Sbjct: 486 TKKAKRKKQILPWRKKIDVKKIICREEIRR 515
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 303 VRQTTRPRLQHGLPILEPPRSGCTCARARRLVGDSSXRGLP 181
+R+++ P GLP EPPRS A + GD RG P
Sbjct: 1349 LRRSSHPPTIDGLPNGEPPRSLSRSAYRKSSSGDEFSRGRP 1389
>SB_217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 310 PTGPPNDETTPPARTADI 257
PT PP++E TPPA++A +
Sbjct: 435 PTPPPSEEATPPAKSAAV 452
>SB_45233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 390 ATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHAL 566
AT A + + ATN S+HA + T +T+ T+CYS T + T +HAL
Sbjct: 51 ATVATNTKYHSATRSTVATNTKSYHAT-SATMATN-TKCYSATRATVGTNTKCTMRHAL 107
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +1
Query: 421 HHAN--FLPQQILPATTQTTILRVPPLLHDVTLTLRKPTANTCQARTS----THFTGKTC 582
HH LP Q +P + +L L H+ T T PT T A T+ T+ T
Sbjct: 13 HHQRPPLLPSQQIPHHQRPPLLPSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPAT 72
Query: 583 IRQRNPNTXASPDTNAP 633
P T P T P
Sbjct: 73 TTPTKPTTTTPPATTTP 89
>SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 438 TATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTH-KHALHRKNLHPPAEPEHRRI 614
T T T H +Y T Y+HT+ A E L TH K ALH LH ++
Sbjct: 289 THTKRTLHVLHYTHTKRALHVLHYTHTKRALHE-LHYTHTKRALH--VLHNTHTKRALQV 345
Query: 615 ARHERTGRLILQVTTTSDVSI 677
+ T R + TT +S+
Sbjct: 346 LNYTHTKRALYTYYTTRTLSV 366
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 160 CYVCGDASHVASGC 119
CY CGD SH+A C
Sbjct: 99 CYTCGDESHIARDC 112
>SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66)
Length = 806
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = -3
Query: 793 GXRXVPLYRSGTNNTTRSMTSGSSKQANKKASKFPWGRKIDTSEVVVTCKIRRPVRSCLA 614
G + P +G+ T R + S N ++S G + D E V RRP +S +
Sbjct: 702 GSKSAPASPTGSPVTGRRNKAEQSTGLNMESSDEESGNESDEKEAPVPSPSRRPNKSGKS 761
Query: 613 MRRCSGSAGGCR 578
R SG CR
Sbjct: 762 NRAGSGPFRDCR 773
>SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34)
Length = 722
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 294 TTRPRLQHGLPILEPPRSGCTCARARRLVGDSSXRGLPAL 175
T+ PR+QH LPI P T + +V + GLP +
Sbjct: 516 TSTPRMQHALPITFPSAVSGTISPYLDIVNKYTPHGLPVV 555
>SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 321 LPSRRSARFS---RTGWAATAEVSPPATCADSQDILPPCKLLTATN 449
LPS+R F+ R GW+ + A C D +DI+ P LL N
Sbjct: 443 LPSQRDGPFAIRLRHGWSISKPSCIIAQCQDVKDIIAPETLLRMPN 488
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 594 PLADAGFSGEVRACACLTSVRGWLPQCESNIV*ERWNP 481
P + SG CACLT+V+G +C+ + WNP
Sbjct: 782 PAGELECSGSNGKCACLTNVQGL--RCDQCVSAYYWNP 817
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 466 QTTILRVPPLLHDVTLTLRKPTANTCQARTSTHFTGKTCIRQRNPNTXASPDT 624
Q ++R+ L H T TL P+ + + ST T T P+T ++P T
Sbjct: 620 QVHLVRLVHLAHLCTCTLSTPSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPST 672
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 382 HLRLPVQTHKTFYHHANFLPQQILPAT--TQTTILRVPPLLHDVTLTLRKPTANTCQART 555
H R H HH ++ + AT T+TTI+ + + T T T T T
Sbjct: 4 HDRHHYHRHHNNIHHHHYATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTT 63
Query: 556 STHFTGKT 579
+T T T
Sbjct: 64 TTTTTTTT 71
>SB_27968| Best HMM Match : Calx-beta (HMM E-Value=0.0037)
Length = 260
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 637 VLSYRSRRLQMCQFFFPTETCLLSCLLA-CWSP 732
V++ + ++C+ +TC+ SCLL CW P
Sbjct: 154 VVTIKDEDRELCKSRISKKTCMNSCLLRFCWQP 186
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 382 HLRLPVQTHKTFYHHANFLPQQILPAT--TQTTILRVPPLLHDVTLTLRKPTANTCQART 555
H R H HH ++ + AT T+TTI+ + + T T T T T
Sbjct: 126 HDRHHYHRHHNNIHHHHYATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTT 185
Query: 556 STHFTGKT 579
+T T T
Sbjct: 186 TTTTTTTT 193
>SB_15946| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 285
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 487 PPLLHDVTLTLRKPTANTCQARTSTHFTGKTC 582
PP + DV +PT TC + T T KTC
Sbjct: 104 PPYMQDVYFICHRPTCKTCTSPV-TALTCKTC 134
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = +3
Query: 459 HHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHER 629
HH +++ + + + H + NR H H HR + H P P H R
Sbjct: 172 HHHHHHHPSTIIIILRHRHRQHYNRHRRH--HHHHRHRHHHHHPNHPYSHHYPNHHR 226
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,723,917
Number of Sequences: 59808
Number of extensions: 574261
Number of successful extensions: 2062
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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