Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_P13
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC078179-1|AAH78179.1|  616|Homo sapiens EIF2AK4 protein protein.      32   2.3  
AB037759-1|BAA92576.1| 1495|Homo sapiens KIAA1338 protein protein.     32   2.3  
BC021176-1|AAH21176.1|  166|Homo sapiens zinc finger, CCHC domai...    30   9.4  

>BC078179-1|AAH78179.1|  616|Homo sapiens EIF2AK4 protein protein.
          Length = 616

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 90  RREQKLKRMEHPEAT*LASPHT*QLTCRREPGAHGMRSLLRGGAP 224
           + E+K K M   E   +AS      T +++PG H   ++L GG+P
Sbjct: 187 KEEKKRKEMAKQERLEIASLSNQDHTSKKDPGGHRTAAILHGGSP 231


>AB037759-1|BAA92576.1| 1495|Homo sapiens KIAA1338 protein protein.
          Length = 1495

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 90  RREQKLKRMEHPEAT*LASPHT*QLTCRREPGAHGMRSLLRGGAP 224
           + E+K K M   E   +AS      T +++PG H   ++L GG+P
Sbjct: 33  KEEKKRKEMAKQERLEIASLSNQDHTSKKDPGGHRTAAILHGGSP 77


>BC021176-1|AAH21176.1|  166|Homo sapiens zinc finger, CCHC domain
           containing 13 protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 169 QVSCYVCGDASHVASGCS 116
           QV CY CG+  HVA  CS
Sbjct: 127 QVKCYRCGEIGHVAINCS 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,261,004
Number of Sequences: 237096
Number of extensions: 2539952
Number of successful extensions: 8478
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8472
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)