Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_P12
         (871 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.3  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    25   4.0  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   9.2  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 608 VPPQSNSSPGSVLEPD 561
           +PP SNSSP S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -3

Query: 698 DQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSSPGSVLEPD 561
           D    C   P++ + +  +  G     +T VPP S +SP +  + D
Sbjct: 48  DHLMQCCAEPKQATTIPPITDGDADDQVTIVPPSSTASPTTAGDGD 93


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 5   GNGQLRTGTDKGNPDCLIKTKHCDGPRG 88
           GNG   +G D+GN      TKH DG  G
Sbjct: 584 GNG---SGGDRGNAGVPDDTKHGDGTDG 608


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,572
Number of Sequences: 2352
Number of extensions: 18694
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)