Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P09
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 193 2e-49
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 175 4e-44
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 117 1e-26
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 105 4e-23
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 92 5e-19
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 38 0.011
01_06_0073 + 26191822-26192116,26192227-26192445,26193655-261938... 34 0.13
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 33 0.30
03_03_0178 - 15144449-15144623,15144776-15144887,15144988-15145087 33 0.40
01_06_0077 + 26215954-26216224,26216355-26216579,26217099-262172... 30 2.8
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 6.5
04_03_0781 + 19572795-19573540,19573906-19573956,19574179-195742... 29 6.5
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 28 8.6
07_01_1209 + 11535266-11535565,11536524-11537009 28 8.6
02_05_0151 - 26299042-26299207,26301678-26301851,26301926-263019... 28 8.6
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 193 bits (470), Expect = 2e-49
Identities = 95/197 (48%), Positives = 135/197 (68%), Gaps = 8/197 (4%)
Frame = +1
Query: 46 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFG-KISEENIKNN 222
PV I SF +++ +N+++ V N N A F+F+++ + + +SYFG E+ I+NN
Sbjct: 49 PVRQIGGCSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNN 108
Query: 223 FVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKS--ASKEEQAQI---TSQVTGQIGW 387
FVLIYELLDEI+DFG+PQN +LK +ITQ+G++S +SK + T QVTG +GW
Sbjct: 109 FVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGW 168
Query: 388 RREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIV 567
RREG+ Y++NE+FLD++E VNLLMS +G VL V GK++MK +LSGMP+ K G+NDKI
Sbjct: 169 RREGLMYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIG 228
Query: 568 M--EAKGKGNGGISGNT 612
+ EA+ K SG T
Sbjct: 229 LEKEAQLKSRPAKSGKT 245
Score = 56.4 bits (130), Expect = 3e-08
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 623 RLALGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
R A + +DD FHQCV L +F +E ++SF+PPDG+FE M+Y
Sbjct: 238 RPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKY 282
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 175 bits (426), Expect = 4e-44
Identities = 77/189 (40%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
Frame = +1
Query: 34 QVRSPVT-NIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEEN 210
+ SPV + A ++ I+ N++L ++QN NAA + FL +++DV + YF ++ EE+
Sbjct: 47 EAHSPVVYDDAGVTYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEES 106
Query: 211 IKNNFVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWR 390
+++NFV++YELLDE++DFG+PQ ++ +L FI + E + VT + WR
Sbjct: 107 LRDNFVVVYELLDEMMDFGYPQYTEAKILSEFIKTDAYRM---EVSQRPPMAVTNAVSWR 163
Query: 391 REGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVM 570
EGI+Y++NE+FLDV+E VN+L++ GQ++ + V G + M++YLSGMPECK G+ND++++
Sbjct: 164 SEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLL 223
Query: 571 EAKGKGNGG 597
EA+G+ G
Sbjct: 224 EAQGRATKG 232
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 623 RLALGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
R GK + +DD +FHQCV+L +FE + +ISFIPPDG F+ M Y
Sbjct: 228 RATKGK-AIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTY 271
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 117 bits (282), Expect = 1e-26
Identities = 59/195 (30%), Positives = 111/195 (56%), Gaps = 13/195 (6%)
Frame = +1
Query: 46 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNF 225
PV N+ ++ H+K A ++ T NV+ +++ E L +I V + Y G ++E++++ NF
Sbjct: 49 PVFNVDGVNYIHVKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNF 108
Query: 226 VLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSAS-------------KEEQAQITSQ 366
+L+YELLDE++DFG+PQ + T VLK++I + I + + + +
Sbjct: 109 ILVYELLDEVIDFGYPQTTSTEVLKSYIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTA 168
Query: 367 VTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKF 546
VT + G K +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE +
Sbjct: 169 VTKSVVATEPGGK-KREEIFVDIIERISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRL 227
Query: 547 GINDKIVMEAKGKGN 591
+N+ + + G +
Sbjct: 228 ALNEDLSIGRTGSSS 242
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 623 RLALGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
R + G V++DDC FH+ V L F+ + ++ IPPDG+F M Y
Sbjct: 246 RSSSGGGAVILDDCNFHESVHLDSFDIDRTLHLIPPDGEFAVMNY 290
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 105 bits (253), Expect = 4e-23
Identities = 64/189 (33%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Frame = +1
Query: 34 QVRSPVTNI-ARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEEN 210
+V SPV + A S+ I+ N++L ++QN NAA + FL +++DV + YF ++ EE+
Sbjct: 48 EVLSPVVHDDAGVSYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEES 107
Query: 211 IKNNFVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWR 390
+++NFV++Y E+LD + D G + +A I S+ +R
Sbjct: 108 LRDNFVVVY----ELLD----EMMDFGY-------------PQYTEAMILSEFIKTDAYR 146
Query: 391 REGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVM 570
E +FLDV+E VN+L++ GQ++ + V G++ M+++LSGMPECK G+ND++++
Sbjct: 147 ME--------VFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLL 198
Query: 571 EAKGKGNGG 597
EA+G+ G
Sbjct: 199 EAQGRTTKG 207
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 623 RLALGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
R GK + +DD +FHQCV+L +FE + +ISFIPPDG F+ M Y
Sbjct: 203 RTTKGK-AIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTY 246
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 92.3 bits (219), Expect = 5e-19
Identities = 43/149 (28%), Positives = 83/149 (55%)
Frame = +1
Query: 124 NVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGHPQNSDTGVLKT 303
+VN F+FL ++ DV+ Y G ++E+ IK+NFVL+Y++LDE++D G P ++ +LK
Sbjct: 91 SVNMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFPLTTEPNILKE 150
Query: 304 FITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLS 483
I I S +T + WR +K NE++++++E ++ ++ +G ++
Sbjct: 151 MIAPPNIVSKMLN---VVTDAAASFVPWRTTVVKDASNEVYVNIVEELDACVNREGALVK 207
Query: 484 AHVAGKVVMKSYLSGMPECKFGINDKIVM 570
GK+ + S L G+PE ++ ++
Sbjct: 208 CEAYGKIQVNSSLPGVPELTLSFSNPTII 236
Score = 49.2 bits (112), Expect = 4e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 620 IRLALGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRYPTPK 769
+ L+ P + I+D +FH CV+ +E+ +SF+PPDG+FE M Y K
Sbjct: 226 LTLSFSNPTI-INDVRFHPCVRFRPWESNQILSFVPPDGQFELMSYRVKK 274
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 91 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGH 270
A+++ N V E + ++V+ YFG + E ++ NF Y +LDEIL G
Sbjct: 174 ASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAGE 233
Query: 271 PQNSDTGVLKTFITQQ 318
Q S + I Q
Sbjct: 234 LQESSKKNVARLIAAQ 249
>01_06_0073 +
26191822-26192116,26192227-26192445,26193655-26193803,
26193910-26194186,26194683-26194963
Length = 406
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/79 (35%), Positives = 40/79 (50%)
Frame = +1
Query: 370 TGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFG 549
TG + W E +Y N+L +D LE + L P ++ A G M+ +LS PE +FG
Sbjct: 261 TGCLRWMNEFSQYH-NKLLIDELEKLRKL-HPDVAIIYADYYG-AAMEVFLS--PE-QFG 314
Query: 550 INDKIVMEAKGKGNGGISG 606
I D + G G G+SG
Sbjct: 315 IKDPLTACCGGGGPYGVSG 333
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 193 KISEENIKNNFVLIYELLDEILDFGHPQNSD-TGVLKTFITQQGIKSASKEEQAQI 357
++ E ++ NF Y +LDE+L G Q S+ VL+ TQ + A+KEE + +
Sbjct: 163 QVCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNLVEAAKEEASSL 218
>03_03_0178 - 15144449-15144623,15144776-15144887,15144988-15145087
Length = 128
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 520 LSGMPECKFGINDKIVMEAKGKGNGGISGNTDSDPARSGEASSG 651
+ G P G ND+I EA G GG G +D P R G ++G
Sbjct: 3 VGGSPVLAAGANDEIGEEAMA-GGGGSVGESDGQPTRPGSNAAG 45
>01_06_0077 +
26215954-26216224,26216355-26216579,26217099-26217247,
26217353-26217629,26217956-26218236
Length = 400
Score = 29.9 bits (64), Expect = 2.8
Identities = 33/113 (29%), Positives = 52/113 (46%)
Frame = +1
Query: 271 PQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVN 450
P N G + ++ Q +S KE+ G + W E +Y N+L +D LE +
Sbjct: 228 PGNIPIGCIPMYLMQ--FESDKKEDY----EPKIGCLRWMNEFSQYH-NKLLVDELENLR 280
Query: 451 LLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKGKGNGGISGN 609
L ++ A G M+ +LS PE +FGI D +V G+G G+S +
Sbjct: 281 KLHLDV-TIIYADYYG-AAMEVFLS--PE-RFGIEDPLVACCGGRGPYGVSAS 328
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -3
Query: 505 PLSQPREQRALDLAVTSTS*HTLVHQGTARFVCT*CLHGASQSDQLLVR*SGLVPPWR 332
P S P +Q D V + S TL+ T RFVC C G + L + G PW+
Sbjct: 21 PASTPSQQNP-DAEVIALSPRTLM--ATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK 75
>04_03_0781 +
19572795-19573540,19573906-19573956,19574179-19574251,
19574772-19574876
Length = 324
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 711 PSPSYHRTESLNX*GIPPQXTFLLPFPRHP 800
P+P +H + L G+PP +FL P P P
Sbjct: 136 PTPRHHHHDVLVLPGMPPPGSFLRPGPAMP 165
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/56 (19%), Positives = 30/56 (53%)
Frame = +1
Query: 91 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEIL 258
A+++ + N + EF+ +++ M +FG + E +I + ++ +L+E++
Sbjct: 64 ASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMV 119
>07_01_1209 + 11535266-11535565,11536524-11537009
Length = 261
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 807 HERDDAETAGEMXFGVGY-LMXSNFPSGGMKEMECSVSNLXSFTHW 673
H DA+ F VG N+P+GG+ + S S + + HW
Sbjct: 113 HLSPDAQVVMSSDFFVGDPTSPGNYPNGGLLYVRSSASTVRFYEHW 158
>02_05_0151 -
26299042-26299207,26301678-26301851,26301926-26301987,
26302082-26302329,26303341-26303416,26303796-26303987,
26304109-26304225
Length = 344
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 658 VNDHYWLPQSEPDHCPCYPICLHFPF 581
+ DH+ +P P PC+P L PF
Sbjct: 127 MGDHHGMPLPPPLQLPCHPKLLQMPF 152
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,931,356
Number of Sequences: 37544
Number of extensions: 589121
Number of successful extensions: 1590
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -