Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P09
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 346 1e-95
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 337 5e-93
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 335 3e-92
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 185 4e-47
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 185 4e-47
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 171 6e-43
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 99 2e-21
AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, smal... 43 3e-04
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 33 0.36
U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chai... 33 0.36
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 33 0.36
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 33 0.36
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 33 0.36
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 2.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 2.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 2.5
Z82059-9|CAB04875.1| 292|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF129111-1|AAD37121.1| 292|Caenorhabditis elegans cell division... 28 7.7
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 346 bits (850), Expect = 1e-95
Identities = 158/190 (83%), Positives = 178/190 (93%)
Frame = +1
Query: 16 LIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGK 195
+IHARQQVRSPVTN+ARTSFFH+KR N+W+ AVT+QNVNAAMVFEFL + D MQSYFGK
Sbjct: 36 VIHARQQVRSPVTNMARTSFFHVKRGNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGK 95
Query: 196 ISEENIKNNFVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTG 375
++EEN+KNNFVLIYELLDEILDFG+PQN+D GVLKTFITQQG+++A+KEEQ+QITSQVTG
Sbjct: 96 LNEENVKNNFVLIYELLDEILDFGYPQNTDPGVLKTFITQQGVRTATKEEQSQITSQVTG 155
Query: 376 QIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGIN 555
QIGWRREGIKYRRNELFLDV+EYVNLLM+ QGQVLSAHVAGKV MKSYLSGMPECKFGIN
Sbjct: 156 QIGWRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFGIN 215
Query: 556 DKIVMEAKGK 585
DKI +E K K
Sbjct: 216 DKITIEGKSK 225
Score = 81.8 bits (193), Expect = 6e-16
Identities = 41/77 (53%), Positives = 46/77 (59%)
Frame = +2
Query: 638 KPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRYPTPKXIXXXXXXXXXXXXXX 817
+ V IDDCQFHQCVKL KFETEH+ISFIPPDG++E MRY T K I
Sbjct: 236 RAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGEYELMRYRTTKDI-QLPFRVIPLVREV 294
Query: 818 GPXKMEXXVXLKXNSXP 868
KME V +K N P
Sbjct: 295 SRNKMEVKVVVKSNFKP 311
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 337 bits (829), Expect = 5e-93
Identities = 158/196 (80%), Positives = 178/196 (90%), Gaps = 6/196 (3%)
Frame = +1
Query: 16 LIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGK 195
+IHARQQVRSPVTN+ARTSFFH+KR N+W+ AVT+QNVNAAMVFEFL + D MQSYFGK
Sbjct: 36 VIHARQQVRSPVTNMARTSFFHVKRGNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGK 95
Query: 196 ISEENIKNNFVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSA------SKEEQAQI 357
++EEN+KNNFVLIYELLDEILDFG+PQN+D GVLKTFITQQG+++A +KEEQ+QI
Sbjct: 96 LNEENVKNNFVLIYELLDEILDFGYPQNTDPGVLKTFITQQGVRTADAPVPVTKEEQSQI 155
Query: 358 TSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPE 537
TSQVTGQIGWRREGIKYRRNELFLDV+EYVNLLM+ QGQVLSAHVAGKV MKSYLSGMPE
Sbjct: 156 TSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPE 215
Query: 538 CKFGINDKIVMEAKGK 585
CKFGINDKI +E K K
Sbjct: 216 CKFGINDKITIEGKSK 231
Score = 81.8 bits (193), Expect = 6e-16
Identities = 41/77 (53%), Positives = 46/77 (59%)
Frame = +2
Query: 638 KPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRYPTPKXIXXXXXXXXXXXXXX 817
+ V IDDCQFHQCVKL KFETEH+ISFIPPDG++E MRY T K I
Sbjct: 242 RAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGEYELMRYRTTKDI-QLPFRVIPLVREV 300
Query: 818 GPXKMEXXVXLKXNSXP 868
KME V +K N P
Sbjct: 301 SRNKMEVKVVVKSNFKP 317
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 335 bits (823), Expect = 3e-92
Identities = 157/196 (80%), Positives = 177/196 (90%), Gaps = 6/196 (3%)
Frame = +1
Query: 16 LIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGK 195
+IHARQQVRSPVTN+ARTSFFH+KR N+W+ AVT+QNVNAAMVF FL + D MQSYFGK
Sbjct: 36 VIHARQQVRSPVTNMARTSFFHVKRGNVWICAVTRQNVNAAMVFAFLKRFADTMQSYFGK 95
Query: 196 ISEENIKNNFVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSA------SKEEQAQI 357
++EEN+KNNFVLIYELLDEILDFG+PQN+D GVLKTFITQQG+++A +KEEQ+QI
Sbjct: 96 LNEENVKNNFVLIYELLDEILDFGYPQNTDPGVLKTFITQQGVRTADAPVPVTKEEQSQI 155
Query: 358 TSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPE 537
TSQVTGQIGWRREGIKYRRNELFLDV+EYVNLLM+ QGQVLSAHVAGKV MKSYLSGMPE
Sbjct: 156 TSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPE 215
Query: 538 CKFGINDKIVMEAKGK 585
CKFGINDKI +E K K
Sbjct: 216 CKFGINDKITIEGKSK 231
Score = 81.8 bits (193), Expect = 6e-16
Identities = 41/77 (53%), Positives = 46/77 (59%)
Frame = +2
Query: 638 KPVVVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRYPTPKXIXXXXXXXXXXXXXX 817
+ V IDDCQFHQCVKL KFETEH+ISFIPPDG++E MRY T K I
Sbjct: 242 RAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGEYELMRYRTTKDI-QLPFRVIPLVREV 300
Query: 818 GPXKMEXXVXLKXNSXP 868
KME V +K N P
Sbjct: 301 SRNKMEVKVVVKSNFKP 317
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 185 bits (450), Expect = 4e-47
Identities = 83/182 (45%), Positives = 120/182 (65%)
Frame = +1
Query: 43 SPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNN 222
+PV T+F IK NI+L + + NVN M+ FL K ++V YF + EE++++N
Sbjct: 47 APVLTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDN 106
Query: 223 FVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGI 402
FV+IYELLDE++DFG PQ +++ +L+ +ITQ+G K S VT + WR EGI
Sbjct: 107 FVVIYELLDEMMDFGFPQTTESRILQEYITQEGQKLISAPRPPM---AVTNAVSWRSEGI 163
Query: 403 KYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKG 582
KYR+NE+FLDV+E VN+L S G VL + + G V M+ YL+GMPE + G+NDK++ E G
Sbjct: 164 KYRKNEVFLDVIESVNMLASANGTVLQSEIVGSVKMRVYLTGMPELRLGLNDKVLFEGSG 223
Query: 583 KG 588
+G
Sbjct: 224 RG 225
Score = 56.8 bits (131), Expect = 2e-08
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +2
Query: 647 VVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
V ++D +FHQCV+L +F+T+ +ISFIPPDG FE M Y
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPDGAFELMSY 266
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 185 bits (450), Expect = 4e-47
Identities = 83/182 (45%), Positives = 120/182 (65%)
Frame = +1
Query: 43 SPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNN 222
+PV T+F IK NI+L + + NVN M+ FL K ++V YF + EE++++N
Sbjct: 47 APVLTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDN 106
Query: 223 FVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGI 402
FV+IYELLDE++DFG PQ +++ +L+ +ITQ+G K S VT + WR EGI
Sbjct: 107 FVVIYELLDEMMDFGFPQTTESRILQEYITQEGQKLISAPRPPM---AVTNAVSWRSEGI 163
Query: 403 KYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKG 582
KYR+NE+FLDV+E VN+L S G VL + + G V M+ YL+GMPE + G+NDK++ E G
Sbjct: 164 KYRKNEVFLDVIESVNMLASANGTVLQSEIVGSVKMRVYLTGMPELRLGLNDKVLFEGSG 223
Query: 583 KG 588
+G
Sbjct: 224 RG 225
Score = 56.8 bits (131), Expect = 2e-08
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +2
Query: 647 VVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
V ++D +FHQCV+L +F+T+ +ISFIPPDG FE M Y
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPDGAFELMSY 266
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 171 bits (416), Expect = 6e-43
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Frame = +1
Query: 43 SPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNN 222
SPV S+ +IK N++L ++K+N N +V L KI++V YF + EE +++N
Sbjct: 47 SPVLVHQGISYTYIKYMNVYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEAVRDN 106
Query: 223 FVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGI 402
FV+IYEL DE+LDFG+PQ +++ +L+ FITQQG ++ E + VT + WR EGI
Sbjct: 107 FVIIYELFDEMLDFGYPQTTESKILQEFITQQG----NRLETVRPPMAVTNAVSWRSEGI 162
Query: 403 KYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKG 582
KYR+NE+FLDV+E VN+L + QG VL + + G + + LSGMPE + G+NDK+ + G
Sbjct: 163 KYRKNEVFLDVIESVNMLANAQGTVLRSEIVGSIRFRVVLSGMPELRLGLNDKVFFQQSG 222
Query: 583 ----KGNGG 597
+GN G
Sbjct: 223 ASSRRGNSG 231
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +2
Query: 647 VVIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
V ++D +FHQCV+L +F++E +ISFIPPDG+FE M Y
Sbjct: 234 VELEDIKFHQCVRLSRFDSERTISFIPPDGEFELMSY 270
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 99 bits (238), Expect = 2e-21
Identities = 53/171 (30%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Frame = +1
Query: 46 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNF 225
P+ + ++ + N++L AV MV EFL ++I YF + S+ ++K N
Sbjct: 47 PIISTPHHYLINVYQNNLFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMKENC 106
Query: 226 VLIYELLDEILDFGHPQNSDTGVLKTFITQQG-IKSASKEEQAQIT---SQVTGQ---IG 384
V+++ELLDE+LD G P ++ +L+ I +++ + + + + TGQ I
Sbjct: 107 VMVFELLDEMLDNGFPLVTEMNILQDLIKPPNFLRNIANQVTGRTNLSETLPTGQLSNIP 166
Query: 385 WRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPE 537
WRR+G+KY NE + DV+E +++++ QG + A + G V + LSGMP+
Sbjct: 167 WRRQGVKYTNNEAYFDVIEEIDVIVDKQGSTVFAEIQGYVDVCCKLSGMPD 217
Score = 46.0 bits (104), Expect = 4e-05
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 650 VIDDCQFHQCVKLXKFETEHSISFIPPDGKFEXMRY 757
++DD FH CV+ ++E E +SF+PPDG F + Y
Sbjct: 227 LLDDVSFHPCVRYKRWENEKVLSFVPPDGNFRLLSY 262
>AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, small
chain (clathrinassociated complex) protein 1 protein.
Length = 157
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 91 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGH 270
A+++ +QN N + E + + ++++ YFG + E +I NF Y +LDE L G
Sbjct: 63 ASLYFCCAIEQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLAGE 122
Query: 271 PQ-NSDTGVLKTFITQQGIK 327
Q S VLK Q I+
Sbjct: 123 IQETSKKQVLKAIAAQDLIQ 142
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 665 QFHQCVKLXKFETEHSISFIPPDG-KFEXMRY 757
+FH V +F+ E I+F PPDG FE MR+
Sbjct: 1328 EFHSIVNKPEFDKEQVIAFSPPDGCFFEIMRF 1359
>U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chain
(clathrin associatedcomplex) protein 2 protein.
Length = 142
Score = 32.7 bits (71), Expect = 0.36
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Frame = +1
Query: 19 IHARQQVRSPV-TNIARTSFFHI---KRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSY 186
+HA VR TN F I + A ++ N E + ++V+ Y
Sbjct: 35 VHACVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDITDNNLYYLEAIHNFVEVLNEY 94
Query: 187 FGKISEENIKNNFVLIYELLDEILDFGH-PQNSDTGVLKTFI 309
F + E ++ NF +Y ++DE+ G + S T VLK +
Sbjct: 95 FHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLL 136
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 94 NIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI-KNNFVLIYELLDEILDFGH 270
NI+L VT +N N E L + V+ Y E+ I ++F LI+ DE++ G+
Sbjct: 69 NIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIF-AFDEVVTLGY 127
Query: 271 PQNSDTGVLKTF 306
++ + ++TF
Sbjct: 128 RESVNLAQIRTF 139
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 32.7 bits (71), Expect = 0.36
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +1
Query: 235 YELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEE--QAQITSQVTGQIGWRREGIKY 408
Y DE+ +G + T K +IT++G + KE Q ++ +V + + K
Sbjct: 329 YRSSDEVQTWGDKDHPITR-FKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKA 387
Query: 409 RRNELFLDVLEYVNLLMSPQGQVLSAHVA 495
++LF DV + + L + Q L AHVA
Sbjct: 388 HYHDLFEDVYDELPLRLRRQRDELDAHVA 416
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 32.7 bits (71), Expect = 0.36
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +1
Query: 235 YELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEE--QAQITSQVTGQIGWRREGIKY 408
Y DE+ +G + T K +IT++G + KE Q ++ +V + + K
Sbjct: 328 YRSSDEVQTWGDKDHPITR-FKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKA 386
Query: 409 RRNELFLDVLEYVNLLMSPQGQVLSAHVA 495
++LF DV + + L + Q L AHVA
Sbjct: 387 HYHDLFEDVYDELPLRLRRQRDELDAHVA 415
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 117 CDRCQPNICTLDMEERCACN 58
CDRC+PN + E C CN
Sbjct: 685 CDRCKPNFYNFPICEECNCN 704
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 117 CDRCQPNICTLDMEERCACN 58
CDRC+PN + E C CN
Sbjct: 685 CDRCKPNFYNFPICEECNCN 704
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 117 CDRCQPNICTLDMEERCACN 58
CDRC+PN + E C CN
Sbjct: 685 CDRCKPNFYNFPICEECNCN 704
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 117 CDRCQPNICTLDMEERCACN 58
CDRC+PN + E C CN
Sbjct: 685 CDRCKPNFYNFPICEECNCN 704
>Z82059-9|CAB04875.1| 292|Caenorhabditis elegans Hypothetical
protein T27E9.3 protein.
Length = 292
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 620 SLSVLPDMPPFPFPLASITILSLIPNLHS 534
S++ LPD P+P ++T ++PNL+S
Sbjct: 229 SITQLPDYKPYPIYHPTLTWSQIVPNLNS 257
>AF129111-1|AAD37121.1| 292|Caenorhabditis elegans cell division
protein kinase 5 protein.
Length = 292
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 620 SLSVLPDMPPFPFPLASITILSLIPNLHS 534
S++ LPD P+P ++T ++PNL+S
Sbjct: 229 SITQLPDYKPYPIYHPTLTWSQIVPNLNS 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,915,014
Number of Sequences: 27780
Number of extensions: 465231
Number of successful extensions: 1456
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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