Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P09
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 27 0.17
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 1.2
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 24 2.1
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 23 3.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 23 3.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 6.5
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 27.5 bits (58), Expect = 0.17
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 461 HRKVKCSLLTWLGKW 505
HR+V C +L+W KW
Sbjct: 59 HRRVTCDVLSWQSKW 73
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/54 (20%), Positives = 24/54 (44%)
Frame = +1
Query: 301 TFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMS 462
T ++ QGI E ++++ T + WR F+ + Y+ +L++
Sbjct: 373 TKLSSQGILGEDVENNSEVSKSRTKESAWRHFAAIIEWLSFFIVIFTYIIILIT 426
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 461 HRKVKCSLLTWLGKWS*SHICPGCQS 538
HR+V C LL++ G+ + S C S
Sbjct: 16 HRRVTCDLLSFKGQVNDSACAANCHS 41
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 461 HRKVKCSLLTWLGKWS*SHICPGCQS 538
HR+V C LL++ G+ + S C S
Sbjct: 41 HRRVTCDLLSFKGQVNDSACAANCLS 66
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 584 FPLASITILS-LIPNLHSGIPDRY 516
F +AS +L+ L+ N H PDRY
Sbjct: 334 FMVASSVVLTVLVLNFHHRTPDRY 357
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 584 FPLASITILS-LIPNLHSGIPDRY 516
F +AS +L+ L+ N H PDRY
Sbjct: 334 FMVASSVVLTVLVLNFHHRTPDRY 357
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 461 HRKVKCSLLTWLGKWS*SHICPGCQS 538
HR+V C LL++ G+ + S C S
Sbjct: 41 HRRVTCDLLSFKGQVNDSACAANCLS 66
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -1
Query: 138 GRVHILLCDRCQPNICTLDMEERCACNV 55
G I+ C C PN CT C +
Sbjct: 420 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 447
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -1
Query: 138 GRVHILLCDRCQPNICTLDMEERCACNV 55
G I+ C C PN CT C +
Sbjct: 406 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 433
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -1
Query: 138 GRVHILLCDRCQPNICTLDMEERCACNV 55
G I+ C C PN CT C +
Sbjct: 440 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 467
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -1
Query: 138 GRVHILLCDRCQPNICTLDMEERCACNV 55
G I+ C C PN CT C +
Sbjct: 389 GPNEIVTCTNCGPNPCTHTTTNGCTAEL 416
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 778 SCRFRVIPLVXXGGPXQNG 834
+CRF + GG QNG
Sbjct: 467 ACRFSAVAQAQLGGERQNG 485
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 445 HTLVHQGTARFVCT*CLHGASQSDQLLV 362
H +H G CT C QS QL++
Sbjct: 166 HMRIHTGERPHKCTVCSKTFIQSGQLVI 193
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 445 HTLVHQGTARFVCT*CLHGASQSDQLLV 362
H H G +VC C G + S QL V
Sbjct: 194 HMRTHTGEKPYVCKACGKGFTCSKQLKV 221
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,485
Number of Sequences: 438
Number of extensions: 5895
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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