Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P08
(858 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g24550.1 68416.m03083 protein kinase family protein contains ... 35 0.060
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 35 0.080
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 34 0.11
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.24
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 0.74
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 31 0.98
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 31 0.98
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ... 31 0.98
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 30 2.3
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 30 2.3
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 29 3.0
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 29 4.0
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 4.0
At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /... 29 4.0
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 5.2
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 28 6.9
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 28 6.9
At2g42400.1 68415.m05248 expressed protein 28 6.9
At1g50090.1 68414.m05619 aminotransferase class IV family protei... 28 6.9
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 28 9.1
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 35.1 bits (77), Expect = 0.060
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG-LKPPLSSEAP 696
P ASS PP + P +S PP + P PS+P PG L PPL +P
Sbjct: 29 PAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLP-PSLP-----PPSPPGSLTPPLPQPSP 82
Query: 697 SAYLTPS 717
SA +TPS
Sbjct: 83 SAPITPS 89
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 34.7 bits (76), Expect = 0.080
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +1
Query: 484 PFILSHYYWRSRPYASSHPPLRSR---LHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKE 654
PF +S +RP+ +S PP S+ + QP + QPP T P P + P +
Sbjct: 488 PFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMP-VSQPPTTSK 546
Query: 655 FAPGLKPPLSSEAPSAYLTPSSLGMAKXGFAPLFQVNDESQA 780
P +PP + ++ PS A +PL V + +Q+
Sbjct: 547 PLPVSQPPPTFQS----TCPSQPPAASSSLSPLPPVFNSTQS 584
Score = 31.5 bits (68), Expect = 0.74
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +1
Query: 469 QCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDS-----IHQPPQT*HPFPSIP 633
Q A +PF +S S+P++ S P +R P Q P + I QPP T PF S P
Sbjct: 471 QPASNPFPVSQPRPNSQPFSMSQPSSTARPF-PASQPPAASKSFPISQPPTTSKPFVSQP 529
Query: 634 *TPYXKEFAPGLKPPLSSE 690
P + P +PP +S+
Sbjct: 530 --PNTSKPMPVSQPPTTSK 546
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 523 YASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 666
Y SS P +RS H P + P + PP T + S P PY E PG
Sbjct: 441 YVSSFPFIRSPSHSPQYASPAAYPSPPTTVYSNRSPP-YPYSPEIIPG 487
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 699
P S PP+ S P H P +H PP H P +P +P P+ S P
Sbjct: 755 PVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPSPIYSPPPP 814
Query: 700 AYLTP 714
+ P
Sbjct: 815 VFSPP 819
Score = 32.3 bits (70), Expect = 0.42
Identities = 28/110 (25%), Positives = 38/110 (34%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 699
P S PP+ S P H P +H PP H P +P +P PP+ S P
Sbjct: 673 PVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSP--PPPVHSPPPP 730
Query: 700 AYLTPSSLGMAKXGFAPLFQVNDESQASRLIXRHSTHXPXPSSXHPLIEN 849
P + AP++ S HS P S P + +
Sbjct: 731 VQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPPPPVHS 780
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 699
PY +S P+++R P ++ D+ PPQ P PS P +P ++P PP+ S P
Sbjct: 511 PYDAS--PVKNRRSPPPPKVEDTRVPPPQPPMPSPSPP-SPI---YSP--PPPVHSPPPP 562
Query: 700 AYLTP 714
Y +P
Sbjct: 563 VYSSP 567
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 31.1 bits (67), Expect = 0.98
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 531 KP-PSPAISATSTRSSNPRFHTPTTPDLTSISIN--PLNAVLXGVRAGVKASVV 683
KP PSP++ + S S NPR P TP T S P++A+ GV A V +S++
Sbjct: 53 KPVPSPSVPSPSVPSPNPR---PVTPPRTPGSSGNCPIDALRLGVCANVLSSLL 103
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 699
P S PP+ S P H P +H PP H P +P ++P PP+ S P
Sbjct: 541 PVHSPPPPVHSP-PPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPP-PPPVHSPPPP 598
Query: 700 AYLTP 714
+ P
Sbjct: 599 VHSPP 603
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 699
P S PP+ S P +H PP H P +P ++P PP+ S P
Sbjct: 569 PVHSPPPPVHSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPPP 628
Query: 700 AYLTP 714
+ P
Sbjct: 629 VFSPP 633
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*H--PFPSIP*TPYXKEFAPGLKPPLSSEA 693
P S PP+ S P H P ++ PP + P P + P ++P L PP S
Sbjct: 621 PVHSPPPPVFSP-PPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPPPVYSPPLLPPKMSSP 679
Query: 694 PS 699
P+
Sbjct: 680 PT 681
>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}, RNA Binding Protein 47
[Nicotiana plumbaginifolia] GI:9663769; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 481
Score = 31.1 bits (67), Expect = 0.98
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQI--PDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEA 693
P+ S PP + P Q P+ HQP H P PY ++ PG +P S A
Sbjct: 388 PHQSYPPPPYGYMPSPYQQQYPPNHHHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPSPTA 447
Query: 694 PSAYLTPSS 720
SA ++P S
Sbjct: 448 VSA-ISPDS 455
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = +1
Query: 496 SHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 675
+H S +A SH P + H P H S P P P +P
Sbjct: 234 AHTPSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHSPATPKSPSPSSSPAQSPATPS 293
Query: 676 PLSSEAPSAYLTPS 717
P++ ++PS +PS
Sbjct: 294 PMTPQSPSPVSSPS 307
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 538 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPS 717
PP S+ H+ I S P +T H PS P TP P PP + PS +TPS
Sbjct: 123 PPPPSKTHERSRPITPSPPPPSKT-HE-PSRPNTP------PPPPPPSKTHEPSRRITPS 174
Query: 718 SLGMAK-XGFAPLFQVND 768
+K F +++V D
Sbjct: 175 PPPPSKILPFGKIYRVGD 192
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 699
PY S PP +++ P PP + + S P PY ++P P + P
Sbjct: 304 PYVYSSPPPPPYVYKSPPPPPYVYTSPPPPPYVYKSPPPPPYVDSYSPPPAPYVYKPPPY 363
Query: 700 AYLTP 714
Y P
Sbjct: 364 VYKPP 368
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = +1
Query: 502 YYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPL 681
Y ++ PY S PP ++ P + PP + + S P PY + P
Sbjct: 58 YVYKPPPYIYSSPPPPPYVYSSPPPPPYVYNSPPPPPYVYSSPPPPPYVYKSPPPPPYVY 117
Query: 682 SSEAPSAYLTPS 717
SS P Y+ S
Sbjct: 118 SSPPPPPYVYKS 129
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 520 PYASSHPP-LRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 696
PY+S P S +H+ + + P + P P + ++ P KP L + P
Sbjct: 24 PYSSHQTPQYNSPVHKHESSYSPKKYSPYYSASPLPPLQYRRQGPKYTPHPKPYLFNSPP 83
Query: 697 SAYLTPS 717
Y +PS
Sbjct: 84 PPYYSPS 90
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*H--PFPSIP*TPYXKEFAPGLKPPLSSEA 693
P S PP+ S P + P +H PP H P P+ +P +P PP+ S
Sbjct: 564 PVHSPPPPVFSP-PPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPP 622
Query: 694 PSAYLTPSS 720
P + P S
Sbjct: 623 PPVFSPPPS 631
>At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 354
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 541 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPL 681
P+ H D Q P S++ P P+ P TP+ + AP +PPL
Sbjct: 292 PITCSFHTEDSQ-PASLNPQPSA--PYAISPTTPHTQPHAPTTQPPL 335
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPS 699
P S+ PL + LHQP ++ P PP P PS P + P PP PS
Sbjct: 553 PSFSNRDPLTT-LHQPINKTPPPPPPPPP---PLPSRSIPPPLAQPPPPRPPPPPPPPPS 608
Query: 700 AYLTPS 717
+ PS
Sbjct: 609 SRSIPS 614
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 508 WRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLK--PPL 681
++ P +PP + P+H P PPQ +P P I P +++ P +K PP
Sbjct: 137 FKKYPPPEQYPPPIKKYPPPEHYPPPIKKYPPQEQYP-PPIKKYPPPEKYPPPIKKYPPP 195
Query: 682 SSEAP 696
P
Sbjct: 196 EQYPP 200
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 559 HQPDHQIPDSIHQPPQ---T*HPFP-SIP*TPYXKEFAPGLKPPLSSEAPSAYLTP 714
HQP HQ P PPQ + P P S+P F+ P S PS Y P
Sbjct: 262 HQPYHQDPPKHMPPPQNYSSHEPSPNSLPNFQSYPSFSESSLPSTSPHYPSHYQNP 317
>At2g42400.1 68415.m05248 expressed protein
Length = 450
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 679 LSSEAPSAYLTPSSLGMAKXGFAPLFQVNDESQASRLIXRHSTHXPXP 822
L++ +P + L + FAPL ++++E A+ + H+ P P
Sbjct: 58 LTAPSPESSLLGEGISQFLEEFAPLLKLDEEDDATSTLKEHAGAKPDP 105
>At1g50090.1 68414.m05619 aminotransferase class IV family protein
contains Pfam profile: PF01063 aminotransferase class IV
Length = 367
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 311 VQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPS 490
V+S N S ++K +A V+F A + K V C ++ + N+++TP
Sbjct: 201 VKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTC----NIFILKGNIVSTPP 256
Query: 491 SSRITIGGLALMHQATLPCDLGY 559
+S + G+ L D+GY
Sbjct: 257 TSGTILPGITRKSICELARDIGY 279
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 314 QSLPNVSSIIKGYRDAY 364
QSLPN+SS IK ++DA+
Sbjct: 854 QSLPNISSSIKYFKDAF 870
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,564,773
Number of Sequences: 28952
Number of extensions: 376711
Number of successful extensions: 1276
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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