Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_P06
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.77 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.77 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   0.77 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   1.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   7.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 488 GDPARRPEARMAECSGGDAEGLPPHSAGG 574
           G  A +P+    + S G  +G+PPH  GG
Sbjct: 39  GGGAVQPDPGSCDPSVGLRQGIPPHHYGG 67


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 573 PPALCGGSPSASPPEHSAILAS 508
           P A    SPS S P+HS+  AS
Sbjct: 32  PAAYSSSSPSGSSPQHSSSSAS 53


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 573 PPALCGGSPSASPPEHSAILAS 508
           P A    SPS S P+HS+  AS
Sbjct: 32  PAAYSSSSPSGSSPQHSSSSAS 53


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 650 EVFIFILS*AKPLFLYIVHLF-LSLESLLRCVE 555
           EVFIF+    KP+  Y+ ++F L L++  + ++
Sbjct: 296 EVFIFMGQLEKPIVFYVANIFSLDLDTFKKIMQ 328


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 1   YWSQRRGLAWCG 36
           YW Q RGL  CG
Sbjct: 406 YWIQLRGLGECG 417


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 1   YWSQRRGLAWCG 36
           YW Q RGL  CG
Sbjct: 406 YWIQLRGLGECG 417


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 670 GVDRALLRCLYSS*ARQ 620
           G D  ++RCL S  ARQ
Sbjct: 249 GTDETMIRCLKSRPARQ 265


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 44  VLIVVRVTYGTASCVRSRVRAAFHRGDP 127
           V +++ + Y   SCV   +  AF+R  P
Sbjct: 300 VFVILTLLYSLNSCVNPWIYLAFNRELP 327


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -2

Query: 468 SRARSEDRRPPPQPSGNSLPMQSANVCGF 382
           S + SED RP P          + N+ GF
Sbjct: 100 SSSDSEDERPRPGGGTKYQTFSNLNISGF 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,320
Number of Sequences: 336
Number of extensions: 4386
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)