Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P06
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 52 4e-07
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 50 2e-06
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 48 6e-06
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 48 6e-06
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 48 6e-06
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 1.1
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 29 3.2
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 28 7.4
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 28 7.4
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 28 7.4
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 28 7.4
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 197 SSRVCFVTRLNGFNQ*NMPRRRNG-EMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDPR 370
+SR+ FV +N Q PR + G + PLPDGW+ G +FIDH ++ TT+ DPR
Sbjct: 338 TSRMYFVNHVNRTTQWEDPRTQGGSDQPLPDGWEMRFTEQGVPFFIDHQSKTTTYNDPR 396
Score = 48.8 bits (111), Expect = 5e-06
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 260 RNGEMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
R PLP GW+ RD G++Y++DHN R TTW P
Sbjct: 249 RPSTQPLPQGWEMRRDPRGRVYYVDHNTRTTTWQRP 284
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 275 PLPDGWDYARDFD-GKLYFIDHNNRKTTWIDPRDRYTKPQTFAD 403
PLP+GW+ +D + ++YF++H NR T W DPR + Q D
Sbjct: 325 PLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDPRTQGGSDQPLPD 368
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 269 EMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
E LPDGW+ D G+ Y++DH + TTW P
Sbjct: 218 EEQLPDGWEMRFDQYGRKYYVDHTTKSTTWERP 250
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 435 EEAYDPQIGP-YYINHVNQVTQLEDPRLE 518
E+ DP Y++NHVN+ TQ EDPR +
Sbjct: 331 EKRQDPNTSRMYFVNHVNRTTQWEDPRTQ 359
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 50.8 bits (116), Expect = 1e-06
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 269 EMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDPR 370
++P+P GW+ D DG YF DHN++ TTW DPR
Sbjct: 202 QLPMPQGWEMCYDSDGVRYFKDHNSKTTTWDDPR 235
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 197 SSRVCFVTRLNGFNQ*NMPRR---RNGEMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
+SR+ FV +N Q PR R + PLPDGW+ G +FIDH ++ TT+ DP
Sbjct: 338 TSRMYFVNHVNRTTQWEDPRTQGFRGSDQPLPDGWEMRFTEQGVPFFIDHQSKTTTYNDP 397
Query: 368 R 370
R
Sbjct: 398 R 398
Score = 48.8 bits (111), Expect = 5e-06
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 260 RNGEMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
R PLP GW+ RD G++Y++DHN R TTW P
Sbjct: 249 RPSTQPLPQGWEMRRDPRGRVYYVDHNTRTTTWQRP 284
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 275 PLPDGWDYARDFD-GKLYFIDHNNRKTTWIDPR 370
PLP+GW+ +D + ++YF++H NR T W DPR
Sbjct: 325 PLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDPR 357
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 269 EMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
E LPDGW+ D G+ Y++DH + TTW P
Sbjct: 218 EEQLPDGWEMRFDQYGRKYYVDHTTKSTTWERP 250
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 435 EEAYDPQIGP-YYINHVNQVTQLEDPRLEWLSVQEAMLRD 551
E+ DP Y++NHVN+ TQ EDPR + + L D
Sbjct: 331 EKRQDPNTSRMYFVNHVNRTTQWEDPRTQGFRGSDQPLPD 370
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 278 LPDGWDYARDFDGKLYFIDHNNRKTTWIDPR 370
LP GW+ A+D DG Y+IDH NR TT+ DPR
Sbjct: 55 LPYGWEQAKDNDGNTYYIDHLNRTTTYTDPR 85
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 435 EEAYDPQIGPYYINHVNQVTQLEDPR 512
E+A D YYI+H+N+ T DPR
Sbjct: 60 EQAKDNDGNTYYIDHLNRTTTYTDPR 85
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 278 LPDGWDYARDFDGKLYFIDHNNRKTTWIDPR 370
LP GW+ A+D DG Y+IDH NR TT+ DPR
Sbjct: 55 LPYGWEQAKDNDGNTYYIDHLNRTTTYTDPR 85
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 435 EEAYDPQIGPYYINHVNQVTQLEDPR 512
E+A D YYI+H+N+ T DPR
Sbjct: 60 EQAKDNDGNTYYIDHLNRTTTYTDPR 85
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 278 LPDGWDYARDFDGKLYFIDHNNRKTTWIDPR 370
LP GW+ A+D DG Y+IDH NR TT+ DPR
Sbjct: 94 LPYGWEQAKDNDGNTYYIDHLNRTTTYTDPR 124
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 435 EEAYDPQIGPYYINHVNQVTQLEDPR 512
E+A D YYI+H+N+ T DPR
Sbjct: 99 EQAKDNDGNTYYIDHLNRTTTYTDPR 124
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 269 EMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDPR 370
E+ LPDGWD +G+ +FIDH + TTW DPR
Sbjct: 269 ELRLPDGWDMQVAPNGRTFFIDHRTKTTTWTDPR 302
Score = 46.4 bits (105), Expect = 3e-05
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 278 LPDGWDYARDFDGKLYFIDHNNRKTTWIDPR 370
LP GW+ DG+++FIDHN R+T W DPR
Sbjct: 323 LPAGWEQRVHADGRVFFIDHNRRRTQWEDPR 353
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 278 LPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
+P GW+ D +G+ +++H R T + P
Sbjct: 169 MPQGWEEREDGNGRTVYVNHALRTTQFTPP 198
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 278 LPDGWDYARDFDGKLYFIDHNNRKTTWIDPRD 373
LP W+ A +G YFIDHN TTW DPR+
Sbjct: 300 LPPNWETAYTENGDKYFIDHNTGTTTWDDPRE 331
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 278 LPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
LP GW+ D + +++DH NRKT + P
Sbjct: 332 LPPGWEQVDDQNYGTFYVDHINRKTQYERP 361
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 435 EEAYDPQIGPYYINHVNQVTQLEDP 509
E+ D G +Y++H+N+ TQ E P
Sbjct: 337 EQVDDQNYGTFYVDHINRKTQYERP 361
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 38.7 bits (86), Expect = 0.005
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 263 NGEMPLPDGWDYARDFDGKLYFIDHNNRKTTWIDP 367
+ ++PLP+ W + + Y++DH NR+T W+ P
Sbjct: 209 SSDIPLPENWAVEFTTENQPYYVDHANRRTHWVHP 243
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 275 PLPDGWDYARDFDGKLYFIDHNNRKTTWIDPRDRYTKPQT 394
PLP GW+ + + F++H N++T++ DPR R + +T
Sbjct: 373 PLPSGWECIT-MNNRTVFLNHANKETSFYDPRIRRFETKT 411
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 275 PLPDGWDYARDFDGKLYFIDHNNRKTTWIDPRDRYTKPQT 394
PLP GW+ + + F++H N++T++ DPR R + +T
Sbjct: 373 PLPSGWECIT-MNNRTVFLNHANKETSFYDPRIRRFETKT 411
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/72 (36%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +2
Query: 371 DRYTKPQTF-ADCIGNELPLGWGGGLRSSDRALLH*SRQSGDPARRPEARMAECSGGDAE 547
DR P F D G P G GGG R DR + G P R + GGD
Sbjct: 61 DRGRSPGGFRGDREGGFSPRGRGGGFRGGDRGGFRGGDRGGSPWRGGD--RGNFRGGDRG 118
Query: 548 GLPPHSAGGSRG 583
G P GG RG
Sbjct: 119 GSP--WRGGDRG 128
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 79 SGSVRHSNDNKNANDRTTRARGA 11
SGSVR+ N N+ +R T+ RGA
Sbjct: 553 SGSVRNEGSNNNSQNRNTKYRGA 575
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 495 QLEDPRLEWLSVQEAMLRDYLHTAQEALEAKKEMYDIKKQRLCLAQDEYKHLNNAL 662
+LED L S EA+L+ +E L +KE+ +++++ +A ++ K NNA+
Sbjct: 175 ELEDRLLSITSESEAILKIKEKVVEENLRIRKEIEELRRENEGIA-EKMKESNNAV 229
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 289 MGLCKGL*RKTLFHRS*QQKN-DVDRPARQIHKATN 393
+ LC GL LF+R+ QK D D P HKA N
Sbjct: 918 VALCGGLGLIALFYRNKYQKEKDPDMPTVSFHKAPN 953
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 289 MGLCKGL*RKTLFHRS*QQKN-DVDRPARQIHKATN 393
+ LC GL LF+R+ QK D D P HKA N
Sbjct: 918 VALCGGLGLIALFYRNKYQKEKDPDMPTVSFHKAPN 953
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 289 MGLCKGL*RKTLFHRS*QQKN-DVDRPARQIHKATN 393
+ LC GL LF+R+ QK D D P HKA N
Sbjct: 918 VALCGGLGLIALFYRNKYQKEKDPDMPTVSFHKAPN 953
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 289 MGLCKGL*RKTLFHRS*QQKN-DVDRPARQIHKATN 393
+ LC GL LF+R+ QK D D P HKA N
Sbjct: 918 VALCGGLGLIALFYRNKYQKEKDPDMPTVSFHKAPN 953
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,620,983
Number of Sequences: 27780
Number of extensions: 420588
Number of successful extensions: 1311
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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