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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_P06
         (859 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g59770.1 68416.m06670 sacI homology domain-containing protein...    42   5e-04
At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein con...    31   1.3  
At5g19320.1 68418.m02302 RAN GTPase activating protein 2 (RanGAP...    30   1.7  
At5g57380.1 68418.m07169 fibronectin type III domain-containing ...    29   5.2  
At4g27360.1 68417.m03927 dynein light chain, putative similar to...    28   6.9  
At4g27020.1 68417.m03886 expressed protein gene F20P5.12 of BAC ...    28   6.9  
At1g02390.1 68414.m00185 phospholipid/glycerol acyltransferase f...    28   6.9  
At4g10190.1 68417.m01670 F-box family protein-related contains T...    28   9.1  
At4g09870.1 68417.m01616 F-box family protein contains Pfam PF00...    28   9.1  
At4g00315.1 68417.m00040 F-box family protein contains F-box dom...    28   9.1  
At3g52600.1 68416.m05794 beta-fructosidase, putative / beta-fruc...    28   9.1  

>At3g59770.1 68416.m06670 sacI homology domain-containing protein /
           WW domain-containing protein contains Pfam profiles
           PF00397: WW domain, PF02383: SacI homology domain;
           identical to cDNA SAC domain protein 9 (SAC9)
           GI:31415734
          Length = 1630

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 275 PLPDGWDYARD-FDGKLYFIDHNNRKTTWIDP 367
           PLP GW+   D   GK Y+IDHN + TTW  P
Sbjct: 509 PLPPGWEKRADAVTGKSYYIDHNTKTTTWSHP 540


>At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           similar to beta-glucosidase (GI:757740) [Brassica
           napus]; similar to beta-glucosidase GB:AAB64244 from
           [Arabidopsis thaliana], (Plant Mol. Biol. 34 (1), 57-68
           (1997))
          Length = 527

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 435 EEAYDPQIGPYYINHVNQVTQLEDPRLEWLS 527
           ++ Y  + G YYI+  N +T++E    +WLS
Sbjct: 478 QDGYTARFGVYYIDFKNNLTRMEKESAKWLS 508


>At5g19320.1 68418.m02302 RAN GTPase activating protein 2 (RanGAP2)
           identical to RAN GTPase activating protein 2 GI:6708468
           from [Arabidopsis thaliana]
          Length = 545

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
 Frame = +3

Query: 282 PTDGIMQGTLTENFISSIITTEKRRGSTRETDTQSHKRSRTALAMNCRLAGEEAYDPQIG 461
           PT   +   +T NF S  I TEK    T++  T++ KR             E   D   G
Sbjct: 22  PTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQFEREPDGDGG 81

Query: 462 PYYINHVNQVTQLEDPRLEWLSVQEAMLRDYLHTAQEALEAKKEMYDIKK-QRLCLAQDE 638
                +  + ++L    L+   V +   R+ +  +++++  ++  +DI K +R  +  +E
Sbjct: 82  SAVQLYAKECSKLILEVLKKGPVAKVAARELI--SEDSVSPRETFFDISKGKRAFIEAEE 139

Query: 639 YKHLNNALSTP 671
            + L   L  P
Sbjct: 140 AEELLKPLKEP 150


>At5g57380.1 68418.m07169 fibronectin type III domain-containing
           protein / PHD finger protein-related contains Pfam
           profiles PF00041: Fibronectin type III domain, PF00628:
           PHD-finger
          Length = 600

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 229 WI*SVKYAKETKR*DALARRMGLCKGL*RKTLFHRS 336
           W   VK AKET+R D L  R+ L + L R T  +R+
Sbjct: 193 WRKQVKVAKETRRVDVLCYRLSLGQKLLRGTTKYRN 228


>At4g27360.1 68417.m03927 dynein light chain, putative similar to
           SP|O02414 Dynein light chain LC6, flagellar outer arm
           {Anthocidaris crassispina}; contains Pfam profile
           PF01221: Dynein light chain type 1
          Length = 103

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 657 HC*GVYIHLELGKAFVSLYRTSLS*PREPPALC 559
           HC G +IH  +G   + L++ S+  P  PP  C
Sbjct: 70  HCSGCFIHFSVGSLTILLFKGSVGEP-APPDRC 101


>At4g27020.1 68417.m03886 expressed protein gene F20P5.12 of BAC
           F20P5 from Arabidopsis thalianachromosome 1,
           PID:g2194125
          Length = 523

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 290 WDYARDFDGKLYFIDHNNRKTTWID 364
           W+YAR  DGK Y   ++N   +WID
Sbjct: 318 WEYARSMDGKPY--GYHNLIFSWID 340


>At1g02390.1 68414.m00185 phospholipid/glycerol acyltransferase
           family protein contains Pfam profile PF01553:
           Acyltransferase
          Length = 530

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 308 FDGKLYFIDHNNRKTTWIDPRDRYTKPQTFAD 403
           F  ++YF+ ++++K+    P+D+Y KP  F D
Sbjct: 231 FCQEIYFVRNSDKKSWQTLPQDQYPKPLIFHD 262


>At4g10190.1 68417.m01670 F-box family protein-related contains
           TIGRFAM TIGR01640: F-box protein interaction domain
          Length = 353

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 284 DGWDYARDFDGKLYFIDHNNRKTTWIDPRDRYTKPQTFA 400
           DG+      D +L   +  +R T WI PR+ Y K   FA
Sbjct: 96  DGFLLCTTVDNRLVVSNPCSRDTKWIQPRNFYKKFDIFA 134


>At4g09870.1 68417.m01616 F-box family protein contains Pfam
           PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
           protein interaction domain; hypothetical protein
           T25N22.10 -Arabidopsis thaliana, PID:g3805763
          Length = 337

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 423 RLAGEEAYDPQIGPYYINHVNQVTQLEDPR 512
           +L  E+++ P++ PY   +V  + Q+E PR
Sbjct: 301 QLRFEQSFCPKMDPYVFGYVPSLVQIEQPR 330


>At4g00315.1 68417.m00040 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 441

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 273 CPCPTDGIMQGTLTENFISSIITTEKRRG-STRETDTQS 386
           CPC  DGIM  T +  ++   +T E++   S  E+D+ S
Sbjct: 215 CPCHLDGIMMNTPSLKYLK--VTDERQESDSDNESDSDS 251


>At3g52600.1 68416.m05794 beta-fructosidase, putative /
           beta-fructofuranosidase, putative similar to
           beta-fructofuranosidase [Daucus carota] GI:18324
          Length = 590

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
 Frame = +2

Query: 281 PDGWD-----YARDFDGKLYFIDHNNRKTTW 358
           PDGWD     Y   +  K +F D  NR+  W
Sbjct: 301 PDGWDGLRFDYGNYYASKTFFDDKTNRRILW 331


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,815,317
Number of Sequences: 28952
Number of extensions: 392285
Number of successful extensions: 1075
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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