BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_P06 (859 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g59770.1 68416.m06670 sacI homology domain-containing protein... 42 5e-04 At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein con... 31 1.3 At5g19320.1 68418.m02302 RAN GTPase activating protein 2 (RanGAP... 30 1.7 At5g57380.1 68418.m07169 fibronectin type III domain-containing ... 29 5.2 At4g27360.1 68417.m03927 dynein light chain, putative similar to... 28 6.9 At4g27020.1 68417.m03886 expressed protein gene F20P5.12 of BAC ... 28 6.9 At1g02390.1 68414.m00185 phospholipid/glycerol acyltransferase f... 28 6.9 At4g10190.1 68417.m01670 F-box family protein-related contains T... 28 9.1 At4g09870.1 68417.m01616 F-box family protein contains Pfam PF00... 28 9.1 At4g00315.1 68417.m00040 F-box family protein contains F-box dom... 28 9.1 At3g52600.1 68416.m05794 beta-fructosidase, putative / beta-fruc... 28 9.1 >At3g59770.1 68416.m06670 sacI homology domain-containing protein / WW domain-containing protein contains Pfam profiles PF00397: WW domain, PF02383: SacI homology domain; identical to cDNA SAC domain protein 9 (SAC9) GI:31415734 Length = 1630 Score = 41.9 bits (94), Expect = 5e-04 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +2 Query: 275 PLPDGWDYARD-FDGKLYFIDHNNRKTTWIDP 367 PLP GW+ D GK Y+IDHN + TTW P Sbjct: 509 PLPPGWEKRADAVTGKSYYIDHNTKTTTWSHP 540 >At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to beta-glucosidase (GI:757740) [Brassica napus]; similar to beta-glucosidase GB:AAB64244 from [Arabidopsis thaliana], (Plant Mol. Biol. 34 (1), 57-68 (1997)) Length = 527 Score = 30.7 bits (66), Expect = 1.3 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +3 Query: 435 EEAYDPQIGPYYINHVNQVTQLEDPRLEWLS 527 ++ Y + G YYI+ N +T++E +WLS Sbjct: 478 QDGYTARFGVYYIDFKNNLTRMEKESAKWLS 508 >At5g19320.1 68418.m02302 RAN GTPase activating protein 2 (RanGAP2) identical to RAN GTPase activating protein 2 GI:6708468 from [Arabidopsis thaliana] Length = 545 Score = 30.3 bits (65), Expect = 1.7 Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 1/131 (0%) Frame = +3 Query: 282 PTDGIMQGTLTENFISSIITTEKRRGSTRETDTQSHKRSRTALAMNCRLAGEEAYDPQIG 461 PT + +T NF S I TEK T++ T++ KR E D G Sbjct: 22 PTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQFEREPDGDGG 81 Query: 462 PYYINHVNQVTQLEDPRLEWLSVQEAMLRDYLHTAQEALEAKKEMYDIKK-QRLCLAQDE 638 + + ++L L+ V + R+ + +++++ ++ +DI K +R + +E Sbjct: 82 SAVQLYAKECSKLILEVLKKGPVAKVAARELI--SEDSVSPRETFFDISKGKRAFIEAEE 139 Query: 639 YKHLNNALSTP 671 + L L P Sbjct: 140 AEELLKPLKEP 150 >At5g57380.1 68418.m07169 fibronectin type III domain-containing protein / PHD finger protein-related contains Pfam profiles PF00041: Fibronectin type III domain, PF00628: PHD-finger Length = 600 Score = 28.7 bits (61), Expect = 5.2 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +1 Query: 229 WI*SVKYAKETKR*DALARRMGLCKGL*RKTLFHRS 336 W VK AKET+R D L R+ L + L R T +R+ Sbjct: 193 WRKQVKVAKETRRVDVLCYRLSLGQKLLRGTTKYRN 228 >At4g27360.1 68417.m03927 dynein light chain, putative similar to SP|O02414 Dynein light chain LC6, flagellar outer arm {Anthocidaris crassispina}; contains Pfam profile PF01221: Dynein light chain type 1 Length = 103 Score = 28.3 bits (60), Expect = 6.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 Query: 657 HC*GVYIHLELGKAFVSLYRTSLS*PREPPALC 559 HC G +IH +G + L++ S+ P PP C Sbjct: 70 HCSGCFIHFSVGSLTILLFKGSVGEP-APPDRC 101 >At4g27020.1 68417.m03886 expressed protein gene F20P5.12 of BAC F20P5 from Arabidopsis thalianachromosome 1, PID:g2194125 Length = 523 Score = 28.3 bits (60), Expect = 6.9 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 290 WDYARDFDGKLYFIDHNNRKTTWID 364 W+YAR DGK Y ++N +WID Sbjct: 318 WEYARSMDGKPY--GYHNLIFSWID 340 >At1g02390.1 68414.m00185 phospholipid/glycerol acyltransferase family protein contains Pfam profile PF01553: Acyltransferase Length = 530 Score = 28.3 bits (60), Expect = 6.9 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = +2 Query: 308 FDGKLYFIDHNNRKTTWIDPRDRYTKPQTFAD 403 F ++YF+ ++++K+ P+D+Y KP F D Sbjct: 231 FCQEIYFVRNSDKKSWQTLPQDQYPKPLIFHD 262 >At4g10190.1 68417.m01670 F-box family protein-related contains TIGRFAM TIGR01640: F-box protein interaction domain Length = 353 Score = 27.9 bits (59), Expect = 9.1 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +2 Query: 284 DGWDYARDFDGKLYFIDHNNRKTTWIDPRDRYTKPQTFA 400 DG+ D +L + +R T WI PR+ Y K FA Sbjct: 96 DGFLLCTTVDNRLVVSNPCSRDTKWIQPRNFYKKFDIFA 134 >At4g09870.1 68417.m01616 F-box family protein contains Pfam PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box protein interaction domain; hypothetical protein T25N22.10 -Arabidopsis thaliana, PID:g3805763 Length = 337 Score = 27.9 bits (59), Expect = 9.1 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +3 Query: 423 RLAGEEAYDPQIGPYYINHVNQVTQLEDPR 512 +L E+++ P++ PY +V + Q+E PR Sbjct: 301 QLRFEQSFCPKMDPYVFGYVPSLVQIEQPR 330 >At4g00315.1 68417.m00040 F-box family protein contains F-box domain Pfam:PF00646 Length = 441 Score = 27.9 bits (59), Expect = 9.1 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +3 Query: 273 CPCPTDGIMQGTLTENFISSIITTEKRRG-STRETDTQS 386 CPC DGIM T + ++ +T E++ S E+D+ S Sbjct: 215 CPCHLDGIMMNTPSLKYLK--VTDERQESDSDNESDSDS 251 >At3g52600.1 68416.m05794 beta-fructosidase, putative / beta-fructofuranosidase, putative similar to beta-fructofuranosidase [Daucus carota] GI:18324 Length = 590 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%) Frame = +2 Query: 281 PDGWD-----YARDFDGKLYFIDHNNRKTTW 358 PDGWD Y + K +F D NR+ W Sbjct: 301 PDGWDGLRFDYGNYYASKTFFDDKTNRRILW 331 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,815,317 Number of Sequences: 28952 Number of extensions: 392285 Number of successful extensions: 1075 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1030 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1071 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1999652000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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