Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P04
(873 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 41 1e-05
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 41 1e-05
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 41 1e-05
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 39 4e-05
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 39 4e-05
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 4.1
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 5.5
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 22 7.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.6
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 40.7 bits (91), Expect = 1e-05
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 348
ES P ++ LTL + ++ E + A L + W D L WN E+ G ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 349 ERLWRPDVVLLNAAATTGRGT 411
+LW+PDV++ N+A GT
Sbjct: 83 NKLWKPDVLMYNSADEGFDGT 103
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 40.7 bits (91), Expect = 1e-05
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 348
ES P ++ LTL + ++ E + A L + W D L WN E+ G ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 349 ERLWRPDVVLLNAAATTGRGT 411
+LW+PDV++ N+A GT
Sbjct: 83 NKLWKPDVLMYNSADEGFDGT 103
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 40.7 bits (91), Expect = 1e-05
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 348
ES P ++ LTL + ++ E + A L + W D L WN E+ G ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 349 ERLWRPDVVLLNAAATTGRGT 411
+LW+PDV++ N+A GT
Sbjct: 83 NKLWKPDVLMYNSADEGFDGT 103
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 39.1 bits (87), Expect = 4e-05
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTGRGT 411
L + W D L WN E+G L ++ +LW+PDV++ N+A GT
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGT 103
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 39.1 bits (87), Expect = 4e-05
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTGRGT 411
L + W D L WN E+G L ++ +LW+PDV++ N+A GT
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGT 103
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/56 (21%), Positives = 22/56 (39%)
Frame = +1
Query: 34 SCHKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVV 201
+C ++ T + F TC I +CE + +D ++ R KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 393 NHRPGDYALRXPGFLINGSXXPGXKXFGPXTPP 491
N+ G Y + G+ G P + FGP PP
Sbjct: 331 NNMAGTYQMT--GYSAMGMAAPHHQNFGPRHPP 361
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.8 bits (44), Expect = 7.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 406 PGRWLQPRLAVPRQASTSVPRTPAKCCSPIPLRSN 302
PG+W+ + Q +T+V T A P P SN
Sbjct: 433 PGQWVPEKSTSTTQRTTTVSTTEA---PPAPAVSN 464
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 114 AFCRTSYSTSEEKR*QNNIS 55
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,091
Number of Sequences: 336
Number of extensions: 3198
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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