Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_P04
(873 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 45 3e-06
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 45 3e-06
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 45 3e-06
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 44 8e-06
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 41 6e-05
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 40 7e-05
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 38 5e-04
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 25 2.3
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 45.6 bits (103), Expect = 2e-06
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 297
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 298 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTGRGTTLS 420
W+ E+G T L V SE +W PD+VL N A TTL+
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTLT 138
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 45.2 bits (102), Expect = 3e-06
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHL 219
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 220 RHANIRESESTVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 387
+ + + + +I+ ++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNN 119
Query: 388 A 390
A
Sbjct: 120 A 120
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 45.2 bits (102), Expect = 3e-06
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHL 219
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 220 RHANIRESESTVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 387
+ + + + +I+ ++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNN 119
Query: 388 A 390
A
Sbjct: 120 A 120
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 44.8 bits (101), Expect = 3e-06
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 151 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 321
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 322 G-CSTWLVSSERLWRPDVVLLNAA 390
G + +WRPDVVL N A
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNA 129
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 44.0 bits (99), Expect = 6e-06
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 139 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 297
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 298 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 390
L WN ++G T V SE +W PD+VL N A
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 116
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 43.6 bits (98), Expect = 8e-06
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 139 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 303
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTGRGT 411
WN E+G L ++ +LW+PDV++ N+A GT
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGT 123
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 42.7 bits (96), Expect = 1e-05
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Frame = +1
Query: 97 ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTV 255
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 256 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 390
+ ++ W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 116
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 41.9 bits (94), Expect = 2e-05
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Frame = +1
Query: 37 CHKMSTTY--IILLPFLLTCAIASAAECENATSLSLMIDS---LLATYDRESPPDSKIVV 201
C+K Y II+L + +I A L ++DS L ES P ++
Sbjct: 10 CYKQLRIYKWIIVLMLIANSSILCMAGYNEKRLLHDLLDSYNILERPVVNESDP-LQLSF 68
Query: 202 NLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 378
LTL ++ ++ E + L++ W D L WN E+G L + R+W+PDV++
Sbjct: 69 GLTL-MQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLM 127
Query: 379 LNAAATTGRGT 411
N+A GT
Sbjct: 128 YNSADEGFDGT 138
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 40.7 bits (91), Expect = 6e-05
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +1
Query: 139 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 303
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTGRGT 411
WN E+G L ++ +LW+PDV++ N+A GT
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGT 123
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 40.3 bits (90), Expect = 7e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 303
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLN 384
W+ E+G L V SE++W PD+VL N
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 39.5 bits (88), Expect = 1e-04
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTGRGT 411
L++ W D + WN+ E+G L + RLW+PDV++ N+A GT
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 106
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 37.5 bits (83), Expect = 5e-04
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 390
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N A
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 119
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 25.4 bits (53), Expect = 2.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 422 AESVVPRPVVAAAFSSTTSGLHKRSEDTSQVLQPHSPA 309
A++V P P A+ ++ SG K+ + S+ L +PA
Sbjct: 66 AKTVAPTPQAASHTAAGNSGQKKKKKSRSRFLSAATPA 103
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,874
Number of Sequences: 2352
Number of extensions: 14146
Number of successful extensions: 41
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -