Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_O22
(839 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 406 e-113
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 405 e-113
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 405 e-113
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 376 e-104
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 376 e-104
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 242 5e-64
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 406 bits (999), Expect = e-113
Identities = 183/266 (68%), Positives = 209/266 (78%)
Frame = +2
Query: 29 FSXRLSSSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAG 208
F+ + MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAG
Sbjct: 4 FTRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAG 63
Query: 209 MTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE 388
MTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE
Sbjct: 64 MTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSE 123
Query: 389 DCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK 568
+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+K
Sbjct: 124 ECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK 183
Query: 569 QRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXX 748
QRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+
Sbjct: 184 QRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVT 243
Query: 749 SRWAHKEATPXXNTRVLXKXACIGXW 826
SRW H + P + L K ACIG W
Sbjct: 244 SRW-HTKKLPRKTHKGLRKVACIGAW 268
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 405 bits (997), Expect = e-113
Identities = 182/258 (70%), Positives = 206/258 (79%)
Frame = +2
Query: 53 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 232
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 233 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 412
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 413 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 592
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 593 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWAHKEA 772
MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+ SRW H +
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW-HTKK 239
Query: 773 TPXXNTRVLXKXACIGXW 826
P + L K ACIG W
Sbjct: 240 LPRKTHKGLRKVACIGAW 257
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 405 bits (997), Expect = e-113
Identities = 182/258 (70%), Positives = 206/258 (79%)
Frame = +2
Query: 53 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 232
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 233 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 412
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 413 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 592
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 593 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWAHKEA 772
MEIQLNGG+IEDKVKWAREHLEKPI V +VF QDEMIDC+ SRW H +
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW-HTKK 239
Query: 773 TPXXNTRVLXKXACIGXW 826
P + L K ACIG W
Sbjct: 240 LPRKTHKGLRKVACIGAW 257
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 376 bits (926), Expect = e-104
Identities = 169/245 (68%), Positives = 193/245 (78%)
Frame = +2
Query: 92 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 271
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 272 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 451
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 452 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 631
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 632 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWAHKEATPXXNTRVLXKXA 811
VKWAREHLEKPI V +VF QDEMIDC+ SRW H + P + L K A
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW-HTKKLPRKTHKGLRKVA 239
Query: 812 CIGXW 826
CIG W
Sbjct: 240 CIGAW 244
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 376 bits (926), Expect = e-104
Identities = 169/245 (68%), Positives = 193/245 (78%)
Frame = +2
Query: 92 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 271
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 272 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 451
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 452 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 631
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 632 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWAHKEATPXXNTRVLXKXA 811
VKWAREHLEKPI V +VF QDEMIDC+ SRW H + P + L K A
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW-HTKKLPRKTHKGLRKVA 239
Query: 812 CIGXW 826
CIG W
Sbjct: 240 CIGAW 244
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 242 bits (592), Expect = 5e-64
Identities = 105/123 (85%), Positives = 114/123 (92%)
Frame = +2
Query: 53 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 232
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 233 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 412
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 413 NWY 421
NWY
Sbjct: 121 NWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +2
Query: 92 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 271
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 272 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 415
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,021,407
Number of Sequences: 53049
Number of extensions: 808222
Number of successful extensions: 1938
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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