Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O18
         (1034 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.7  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          25   3.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          25   3.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          25   3.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          25   3.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 93   KKFSKNSPKLRAPNPGGLS 37
            K  SK SPKLR P P  L+
Sbjct: 3044 KPLSKASPKLRLPKPPNLA 3062


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 26  KFPSESPPGFGALNFGEFFENFLVPR 103
           K  SE+PP +  LN+ E  + F   R
Sbjct: 155 KSSSETPPSYNQLNYNENLQRFFDSR 180


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 26  KFPSESPPGFGALNFGEFFENFLVPR 103
           K  SE+PP +  LN+ E  + F   R
Sbjct: 155 KSSSETPPSYNQLNYNENLQRFFDSR 180


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 26  KFPSESPPGFGALNFGEFFENFLVPR 103
           K  SE+PP +  LN+ E  + F   R
Sbjct: 155 KSSSETPPSYNQLNYNENLQRFFDSR 180


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 26  KFPSESPPGFGALNFGEFFENFLVPR 103
           K  SE+PP +  LN+ E  + F   R
Sbjct: 155 KSSSETPPSYNQLNYNENLQRFFDSR 180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,194
Number of Sequences: 2352
Number of extensions: 7454
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 114696621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)