Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O17
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   5.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   7.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.4  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
          gambiae putativetubulin alpha chain mRNA, complete cds.
          ).
          Length = 91

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 8  LALRTGACRVWTGSGCGRCRVWSM 79
          +++  G   V  G+ C  C VWSM
Sbjct: 5  ISVHVGQAGVQIGNPCWDCTVWSM 28


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 490 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 380
           D +F  L RV  TPA  P  +EFL + D      + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 297 PLNGGRTESCRSRTKRNR 244
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,996
Number of Sequences: 2352
Number of extensions: 17314
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)