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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O16
         (833 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    29   0.070
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     25   0.86 
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    25   0.86 
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    25   0.86 
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    25   0.86 
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    25   0.86 
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    24   1.5  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   1.5  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   4.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   4.6  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   6.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   6.1  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   8.0  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   8.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   8.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 28.7 bits (61), Expect = 0.070
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 673 DRFARSSLKNHYFHCFITYSVGRKRCPGR*Y 765
           D F      N +++ F+ +S G + C GR Y
Sbjct: 463 DNFLPEKTANRHYYAFVPFSAGPRSCVGRKY 493


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 688 SSLKNHYFHCFITYSVGRKRCPGR*YRRAH 777
           SS    +FHC+     GRK  P   Y R +
Sbjct: 420 SSFFQQFFHCYCPVRFGRKADPNGDYIRRY 449


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = -2

Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110
           R    R R K++ +++ + RK R   +    D  R  R  S+    I ++    ++ N N
Sbjct: 38  RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95

Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5
           + K+    NI+     P P+PV     PV   N P
Sbjct: 96  NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 127


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = -2

Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110
           R    R R K++ +++ + RK R   +    D  R  R  S+    I ++    ++ N N
Sbjct: 38  RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95

Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5
           + K+    NI+     P P+PV     PV   N P
Sbjct: 96  NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 127


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = -2

Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110
           R    R R K++ +++ + RK R   +    D  R  R  S+    I ++    ++ N N
Sbjct: 38  RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95

Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5
           + K+    NI+     P P+PV     PV   N P
Sbjct: 96  NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 127


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = -2

Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110
           R    R R K++ +++ + RK R   +    D  R  R  S+    I ++    ++ N N
Sbjct: 271 RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 328

Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5
           + K+    NI+     P P+PV     PV   N P
Sbjct: 329 NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 360


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = -2

Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110
           R    R R K++ +++ + RK R   +    D  R  R  S+    I ++    ++ N N
Sbjct: 38  RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95

Query: 109 SLKRT*RTNIDQTRHRPHPLPV 44
           + K+    NI+     P P+P+
Sbjct: 96  NYKKLQYYNINYIEQIPVPVPI 117


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
          receptor 2 protein.
          Length = 210

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 72 PGTGRIRFPSKPDTPRSSEPIPPV 1
          P +G +      + P+  EP+PPV
Sbjct: 24 PNSGELFKAGSAEQPKEQEPLPPV 47


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 148
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 42  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 148
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 42  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 286 RTESCRSRTKRNRHD 242
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 286 RTESCRSRTKRNRHD 242
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 286 RTESCRSRTKRNRHD 242
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 286 RTESCRSRTKRNRHD 242
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 286 RTESCRSRTKRNRHD 242
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 286 RTESCRSRTKRNRHD 242
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 286 RTESCRSRTKRNRHD 242
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 667 VGDRFARSSLKNHYFHCFI 723
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 667 VGDRFARSSLKNHYFHCFI 723
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 695 SDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSP 585
           +D R   SP   TP+ + Y   +E+ +  S F  D+P
Sbjct: 21  NDKRIYLSPR--TPIKNVYKNNIETKNQLSPFNIDTP 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,349
Number of Sequences: 438
Number of extensions: 5957
Number of successful extensions: 27
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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