BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_O16 (833 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 29 0.070 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.86 DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 25 0.86 DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 25 0.86 DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 25 0.86 AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.86 DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 1.5 AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 24 1.5 DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.6 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.6 AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.1 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.1 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.1 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.1 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.1 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.1 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.1 DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 8.0 AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 8.0 AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 8.0 >DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monooxygenase protein. Length = 548 Score = 28.7 bits (61), Expect = 0.070 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +1 Query: 673 DRFARSSLKNHYFHCFITYSVGRKRCPGR*Y 765 D F N +++ F+ +S G + C GR Y Sbjct: 463 DNFLPEKTANRHYYAFVPFSAGPRSCVGRKY 493 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 25.0 bits (52), Expect = 0.86 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = +1 Query: 688 SSLKNHYFHCFITYSVGRKRCPGR*YRRAH 777 SS +FHC+ GRK P Y R + Sbjct: 420 SSFFQQFFHCYCPVRFGRKADPNGDYIRRY 449 >DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 25.0 bits (52), Expect = 0.86 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = -2 Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110 R R R K++ +++ + RK R + D R R S+ I ++ ++ N N Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95 Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5 + K+ NI+ P P+PV PV N P Sbjct: 96 NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 127 >DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 25.0 bits (52), Expect = 0.86 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = -2 Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110 R R R K++ +++ + RK R + D R R S+ I ++ ++ N N Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95 Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5 + K+ NI+ P P+PV PV N P Sbjct: 96 NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 127 >DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 25.0 bits (52), Expect = 0.86 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = -2 Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110 R R R K++ +++ + RK R + D R R S+ I ++ ++ N N Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95 Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5 + K+ NI+ P P+PV PV N P Sbjct: 96 NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 127 >AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex determiner protein. Length = 410 Score = 25.0 bits (52), Expect = 0.86 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = -2 Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110 R R R K++ +++ + RK R + D R R S+ I ++ ++ N N Sbjct: 271 RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 328 Query: 109 SLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPP 5 + K+ NI+ P P+PV PV N P Sbjct: 329 NYKKLQYYNINYIEQIPVPVPVP---VPVYYGNFP 360 >DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex determiner protein. Length = 176 Score = 24.2 bits (50), Expect = 1.5 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = -2 Query: 286 RTESCRSRTKRN-RHDLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTN 110 R R R K++ +++ + RK R + D R R S+ I ++ ++ N N Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNN 95 Query: 109 SLKRT*RTNIDQTRHRPHPLPV 44 + K+ NI+ P P+P+ Sbjct: 96 NYKKLQYYNINYIEQIPVPVPI 117 >AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory receptor 2 protein. Length = 210 Score = 24.2 bits (50), Expect = 1.5 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -3 Query: 72 PGTGRIRFPSKPDTPRSSEPIPPV 1 P +G + + P+ EP+PPV Sbjct: 24 PNSGELFKAGSAEQPKEQEPLPPV 47 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 22.6 bits (46), Expect = 4.6 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 50 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 148 K +RPV DV +C ++S LI LKN I Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 22.6 bits (46), Expect = 4.6 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 50 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 148 K +RPV DV +C ++S LI LKN I Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 286 RTESCRSRTKRNRHD 242 RT SC SR + +RH+ Sbjct: 226 RTSSCHSRYEDSRHE 240 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 286 RTESCRSRTKRNRHD 242 RT SC SR + +RH+ Sbjct: 226 RTSSCHSRYEDSRHE 240 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 286 RTESCRSRTKRNRHD 242 RT SC SR + +RH+ Sbjct: 226 RTSSCHSRYEDSRHE 240 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 286 RTESCRSRTKRNRHD 242 RT SC SR + +RH+ Sbjct: 226 RTSSCHSRYEDSRHE 240 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 286 RTESCRSRTKRNRHD 242 RT SC SR + +RH+ Sbjct: 226 RTSSCHSRYEDSRHE 240 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 22.2 bits (45), Expect = 6.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 286 RTESCRSRTKRNRHD 242 RT SC SR + +RH+ Sbjct: 226 RTSSCHSRYEDSRHE 240 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 22.2 bits (45), Expect = 6.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 Query: 286 RTESCRSRTKRNRHD 242 RT SC SR + +RH+ Sbjct: 226 RTSSCHSRYEDSRHE 240 >DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1 protein. Length = 116 Score = 21.8 bits (44), Expect = 8.0 Identities = 7/19 (36%), Positives = 11/19 (57%) Frame = +1 Query: 667 VGDRFARSSLKNHYFHCFI 723 + + A L+N Y+ CFI Sbjct: 32 IDEILANDRLRNQYYDCFI 50 >AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein protein. Length = 116 Score = 21.8 bits (44), Expect = 8.0 Identities = 7/19 (36%), Positives = 11/19 (57%) Frame = +1 Query: 667 VGDRFARSSLKNHYFHCFI 723 + + A L+N Y+ CFI Sbjct: 32 IDEILANDRLRNQYYDCFI 50 >AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. Length = 316 Score = 21.8 bits (44), Expect = 8.0 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = -1 Query: 695 SDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSP 585 +D R SP TP+ + Y +E+ + S F D+P Sbjct: 21 NDKRIYLSPR--TPIKNVYKNNIETKNQLSPFNIDTP 55 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 244,349 Number of Sequences: 438 Number of extensions: 5957 Number of successful extensions: 27 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 26702940 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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