Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O09
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IU42 Cluster: Formin homology protein A; n=2; Dictyos...    35   1.7  
UniRef50_Q54ER5 Cluster: Formin homology domain-containing prote...    34   3.0  
UniRef50_UPI0000E482F8 Cluster: PREDICTED: similar to dishevelle...    33   9.3  
UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella ve...    33   9.3  

>UniRef50_Q8IU42 Cluster: Formin homology protein A; n=2;
           Dictyostelium discoideum|Rep: Formin homology protein A
           - Dictyostelium discoideum (Slime mold)
          Length = 1218

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 21/66 (31%), Positives = 21/66 (31%)
 Frame = +3

Query: 507 PXXXXPXXXXXXPPPXXXGXXXGGGXPXKXXXPPXGGGXXPPXXXXKXKKKXXGXXGXKF 686
           P    P      PPP       GGG P     PP GGG  PP      K          F
Sbjct: 681 PPPPPPMTGGGPPPPPPPPPMTGGGPPP--PPPPPGGGPPPPPPPPGAKAGGPPPPPPPF 738

Query: 687 XXXPPP 704
              PPP
Sbjct: 739 GKGPPP 744


>UniRef50_Q54ER5 Cluster: Formin homology domain-containing protein;
            n=1; Dictyostelium discoideum AX4|Rep: Formin homology
            domain-containing protein - Dictyostelium discoideum AX4
          Length = 2546

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +3

Query: 543  PPPXXXGXXXGGGXPXKXXXPPXGGGXXPP 632
            PPP   G   GGG P     PP GG   PP
Sbjct: 1063 PPPPPPGKSSGGGPPPPPPPPPKGGKGGPP 1092


>UniRef50_UPI0000E482F8 Cluster: PREDICTED: similar to dishevelled
           associated activator of morphogenesis 1 like; n=3;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           dishevelled associated activator of morphogenesis 1 like
           - Strongylocentrotus purpuratus
          Length = 801

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +3

Query: 507 PXXXXPXXXXXXPPPXXXGXXXGGGXPXKXXXPPXGGGXXP 629
           P    P      PPP   G   GGG P     PP GG   P
Sbjct: 269 PPPPPPGPGGAPPPPPPPGMFGGGGPPPPPGAPPFGGMSAP 309


>UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1027

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/42 (35%), Positives = 15/42 (35%)
 Frame = +3

Query: 507 PXXXXPXXXXXXPPPXXXGXXXGGGXPXKXXXPPXGGGXXPP 632
           P    P      PPP       GGG P     PP  GG  PP
Sbjct: 430 PPPPPPGMGGAPPPPPPPPPGMGGGPPPPPPPPPGPGGGPPP 471


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,410,987
Number of Sequences: 1657284
Number of extensions: 8423646
Number of successful extensions: 12294
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11185
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)