Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O08
         (837 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    28   0.40 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.9  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    24   5.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.0  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            24   6.6  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
 Frame = +1

Query: 214 VGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLDS-SPWSVARAAAKS 390
           VG+W RL  +   A  HA V    LA+ +  A     ++ RFG  D  + WS    +  S
Sbjct: 286 VGRWQRLRTETLNAVAHATV----LALIAAVAACLWAVLDRFGPADHFAAWSALYVSLAS 341

Query: 391 DKIRKKLRWAWKQLRRFSR 447
           +     L +  + L R  R
Sbjct: 342 NGTMAALGYVCQLLGRLER 360


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 8/103 (7%)
 Frame = +2

Query: 356  HHGQWQEPPPNLIRFVR-----NCGGPGNSSAGSAVLTPQRNDHLCACFG---ENICMHL 511
            HH   Q+PPP      +     +   PG S   SAV+TP    H  A       ++  H 
Sbjct: 823  HHHAAQQPPPGSHPGAQTQPQLSQHPPGASGRSSAVITPPSTHHQAAAVAAHHHHLQHHA 882

Query: 512  LMDANFANPHAPRHPQSGLGSDARR*PDGTSCSSCTLISTPSH 640
             M A  A   A +  Q    S  +    G   ++ T    P+H
Sbjct: 883  AMVAAAAAAAASQEQQQRSSSSQQH--RGPGAAAATGPPPPTH 923


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 827 TCFFPWLSPRKXQSCCVVES 768
           TC  P+L   K  SCC +E+
Sbjct: 14  TCLSPFLQSIKVASCCQLEA 33


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 238 PVALATVRLLSGFGHRAFSIGHPRCFQAQNRAGISESDELSKSPT 104
           P  +A ++L++G G    +IG    F+    A  S  D    SP+
Sbjct: 136 PKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPS 180


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 332 GVSGGSTRHHGQWQEPP-PNLIRFVRNCGGPGNSSAGSAVLTPQR 463
           G     T+H  Q QEPP P+    +R  G    + +    +TP+R
Sbjct: 204 GAGATGTQHSDQQQEPPRPSSPPAIRRSGTLEVTFSERTFVTPKR 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 973,719
Number of Sequences: 2352
Number of extensions: 22629
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)