Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O03
         (846 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe...    32   0.089
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch...    29   0.83 
SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    29   1.1  
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce...    29   1.1  
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c...    28   1.4  
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa...    27   2.5  
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce...    27   2.5  
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe...    26   5.8  
SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subuni...    26   7.7  
SPAC20H4.05c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual       26   7.7  

>SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 306

 Score = 32.3 bits (70), Expect = 0.089
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 219 DLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVK 326
           DLFKT+ E+   + ++ QN   Q N LIG E   ++
Sbjct: 60  DLFKTFDEYVNEARRLKQNYGDQINILIGAETEYIR 95


>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
           Trk2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 880

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 28/122 (22%), Positives = 41/122 (33%)
 Frame = +3

Query: 198 LPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVN 377
           +P S     F+T PE  E      +N  Q ++ L                 ++E   D N
Sbjct: 258 IPSSFEESSFQTIPEDFEPQVHDHENQTQLNHHLDNNSS------ISSHNPSLETANDGN 311

Query: 378 DSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNI 557
              +   N +  T   +N P  A  S  N N  H ++            GS I I    +
Sbjct: 312 QETVSSSNSNYSTTRVDNDPHVASYSPQNSNFDHQAAATTNDAHQNVVRGSAITIAPTPV 371

Query: 558 PR 563
           PR
Sbjct: 372 PR 373


>SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 190

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = +3

Query: 240 EFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRINISIDTV 419
           +F   +N    N+   S      E P +K  C  FTS+I    D N  + D +   + T 
Sbjct: 14  DFPTTTNFFLTNILSMSVVFRTVEDPELKSICTTFTSSISAEFDSNTLVCDLVETDLFTE 73

Query: 420 SG 425
            G
Sbjct: 74  EG 75


>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1151

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 129 HTXAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISN 260
           +T  +  +EG   VNK +K S++   SSS D   + P+F +  N
Sbjct: 14  NTENSTKEEGTWEVNKLMKFSSEEGRSSSDDYMFSSPDFEKAGN 57


>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 474

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +3

Query: 510 SEKKMGST-IFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYTEKGE 686
           SE+ M +  +F    + P PQL  KDT++        ++SD+   ++ L LN  +   G 
Sbjct: 51  SEESMPAPKLFPKLTSKPNPQLNLKDTLNK-------RVSDR---LQALELNKSFDFSGT 100

Query: 687 AVGYEHPYQMELDMYNPPVAVHRXRSGASMFPP 785
                HP    L  +  P   HR R+  S+  P
Sbjct: 101 PRPM-HPISHPLSQHKTPEFKHRKRNVESILTP 132


>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
           Ght7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 518

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = -3

Query: 676 SVYKMFKAKGLMLFGLSEILGTHKFSELSIVSLKVSCGRGMFLAPMNIVDPIFFSE 509
           + Y++F   G+ +      +GTHK+S  +    ++S G  +    + +V  IF  E
Sbjct: 117 TTYQLFITLGIFIAACIN-MGTHKYSHGTTAQWRISIGINLLWGIITLVGIIFLPE 171


>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 681

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 396 INISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKP 503
           +N S+D +S  + PS  F +  +   SH SSP+  P
Sbjct: 314 LNPSVDLLSNHSTPSFIFENSPSAEFSHQSSPYLVP 349


>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 886

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = -3

Query: 400 LILSNKLSFTSASFSMLLVKSSHFSFTAGC-SVPISSFDC*ATFWLI*FEISLNSGYVLN 224
           LIL + L+F      +L  KS  +S T  C S+ + SF     F L  F     S   + 
Sbjct: 252 LILYDTLTFV---VHLLSQKSLPYSLTTFCASILVLSF-----FQLPLFADHFLSALDVK 303

Query: 223 KSYEELIGS*FDDFIVLLTLLY 158
           K Y + +GS FD+ I++++  Y
Sbjct: 304 KKYIDALGSSFDEKIMIISHKY 325


>SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subunit
           Mmm1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 346

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 366 ADVNDSLLDRINISIDTVSGENLPSEAFAS 455
           A++  SL D IN ++DT    N P  AFA+
Sbjct: 170 AEMLVSLTDNINCTVDTKLLLNFPKPAFAT 199


>SPAC20H4.05c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 221

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 303 GTEQPAVKLKCEDFTSNIEKLADVNDSLLDRINISIDT 416
           G  +P  K+K   F +N    +D++DSL + IN+  DT
Sbjct: 141 GFHKPTDKIKIP-FINNTAHESDLHDSLQEAINLYPDT 177


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,251,627
Number of Sequences: 5004
Number of extensions: 67695
Number of successful extensions: 234
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)