Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_O03
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66113-1|CAA46904.1| 885|Homo sapiens PM/Scl 100kD nucleolar pr... 75 2e-13
L01457-1|AAB59352.1| 860|Homo sapiens PM-Scl autoantigen protein. 75 2e-13
BC073788-1|AAH73788.1| 885|Homo sapiens exosome component 10 pr... 75 2e-13
BC039901-1|AAH39901.1| 885|Homo sapiens exosome component 10 pr... 75 2e-13
AL109811-9|CAI22106.1| 860|Homo sapiens exosome component 10 pr... 75 2e-13
AL109811-8|CAI22107.1| 885|Homo sapiens exosome component 10 pr... 75 2e-13
AJ300188-2|CAC15569.1| 860|Homo sapiens PM-scl autoantigen prot... 75 2e-13
AB209236-1|BAD92473.1| 431|Homo sapiens exosome component 10 is... 75 2e-13
BC017667-1|AAH17667.1| 683|Homo sapiens NAV3 protein protein. 34 0.56
AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein. 34 0.56
AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 prot... 34 0.56
U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open read... 32 3.0
BC113950-1|AAI13951.1| 1655|Homo sapiens phospholipase C, eta 1 ... 31 5.3
AK022610-1|BAB14129.1| 466|Homo sapiens protein ( Homo sapiens ... 31 5.3
>X66113-1|CAA46904.1| 885|Homo sapiens PM/Scl 100kD nucleolar
protein protein.
Length = 885
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 42 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 101
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 102 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 161
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 162 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 212
>L01457-1|AAB59352.1| 860|Homo sapiens PM-Scl autoantigen protein.
Length = 860
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 42 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 101
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 102 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 161
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 162 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 212
>BC073788-1|AAH73788.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 42 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 101
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 102 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 161
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 162 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 212
>BC039901-1|AAH39901.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 42 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 101
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 102 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 161
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 162 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 212
>AL109811-9|CAI22106.1| 860|Homo sapiens exosome component 10
protein.
Length = 860
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 42 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 101
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 102 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 161
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 162 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 212
>AL109811-8|CAI22107.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 42 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 101
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 102 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 161
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 162 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 212
>AJ300188-2|CAC15569.1| 860|Homo sapiens PM-scl autoantigen
protein.
Length = 860
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 42 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 101
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 102 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 161
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 162 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 212
>AB209236-1|BAD92473.1| 431|Homo sapiens exosome component 10
isoform 2 variant protein.
Length = 431
Score = 75.4 bits (177), Expect = 2e-13
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = +3
Query: 165 SVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 341
SV K+S LP YD ++++P F + Q + ++ +K
Sbjct: 41 SVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRS 100
Query: 342 FTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVI 509
+ +E L D ND +L+R+ I +D SG N + P S WN+
Sbjct: 101 KVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAA 160
Query: 510 SE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPL 653
KK S F + AKNI RPQL F++ IDNS ++PKI KPN KPL
Sbjct: 161 EYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPL 211
>BC017667-1|AAH17667.1| 683|Homo sapiens NAV3 protein protein.
Length = 683
Score = 34.3 bits (75), Expect = 0.56
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +3
Query: 411 DTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQLTFKDTI 590
D E+ E F SGLN S NSSP P ++ K GS K++ +P+ +
Sbjct: 414 DDAFSESGEMEGFNSGLNSGGSTNSSPKVSPKLAPPKAGSKNLSNKKSLLQPKEKEEKNR 473
Query: 591 DNSENLWVPKISDKPNNIKPLA 656
D ++ + ++ + + +A
Sbjct: 474 DKNKVCTEKPVKEEKDQVTEMA 495
>AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein.
Length = 2385
Score = 34.3 bits (75), Expect = 0.56
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +3
Query: 411 DTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQLTFKDTI 590
D E+ E F SGLN S NSSP P ++ K GS K++ +P+ +
Sbjct: 414 DDAFSESGEMEGFNSGLNSGGSTNSSPKVSPKLAPPKAGSKNLSNKKSLLQPKEKEEKNR 473
Query: 591 DNSENLWVPKISDKPNNIKPLA 656
D ++ + ++ + + +A
Sbjct: 474 DKNKVCTEKPVKEEKDQVTEMA 495
>AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3
protein.
Length = 2282
Score = 34.3 bits (75), Expect = 0.56
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +3
Query: 411 DTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQLTFKDTI 590
D E+ E F SGLN S NSSP P ++ K GS K++ +P+ +
Sbjct: 333 DDAFSESGEMEGFNSGLNSGGSTNSSPKVSPKLAPPKAGSKNLSNKKSLLQPKEKEEKNR 392
Query: 591 DNSENLWVPKISDKPNNIKPLA 656
D ++ + ++ + + +A
Sbjct: 393 DKNKVCTEKPVKEEKDQVTEMA 414
>U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open reading
frame protein.
Length = 124
Score = 31.9 bits (69), Expect = 3.0
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 463 LRPL-ANASLGKFSPLTVSMLILILSNKLSFTSASFSMLLVKSSHFSFTAGCSVPISSFD 287
LRPL A AS S VS + + + LSF+++ FS S FSF++ S +
Sbjct: 42 LRPLEATASFSSLSSPEVSSVFSLRRSSLSFSTSGFSSSFSASFSFSFSSFSSWLLRGMG 101
Query: 286 C 284
C
Sbjct: 102 C 102
>BC113950-1|AAI13951.1| 1655|Homo sapiens phospholipase C, eta 1
protein.
Length = 1655
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 396 INISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIP 560
++I+I+ + G+N + N NP H+SS N + ++ +G I + P
Sbjct: 833 VHITINEIYGKNRQLQGLKGLFNKNPRHSSSENNSHYVRKRSIGDRILRRTASAP 887
>AK022610-1|BAB14129.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ12548 fis, clone NT2RM4000657, weakly similar to
1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE
PHOSPHODIESTERASE DELTA ).
Length = 466
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 396 INISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIP 560
++I+I+ + G+N + N NP H+SS N + ++ +G I + P
Sbjct: 303 VHITINEIYGKNRQLQGLKGLFNKNPRHSSSENNSHYVRKRSIGDRILRRTASAP 357
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,008,269
Number of Sequences: 237096
Number of extensions: 2463476
Number of successful extensions: 8324
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8324
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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