Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O03
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1911|AAF55107.2|  885|Drosophila melanogaster CG7292-PA...    97   3e-20
AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p pro...    36   0.092
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ...    36   0.092
AE014298-1000|AAN09196.1|  319|Drosophila melanogaster CG14425-P...    30   4.6  

>AE014297-1911|AAF55107.2|  885|Drosophila melanogaster CG7292-PA
           protein.
          Length = 885

 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
 Frame = +3

Query: 141 AVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPA 320
           A T +G+++     K++N  P  ++  L+ +YP +  +   ++Q V      ++ ++   
Sbjct: 33  AFTNKGFKNAIAATKAANAFPQGTARALYLSYPGYARVMEDLTQRVVALIGNVLHSKDIK 92

Query: 321 VKLKCEDFTSNIEKLADVNDSLLDRINISIDTVSGENLPSEAFASGLND----------- 467
             +K        E + + ND L +RI  ++D   G    ++       D           
Sbjct: 93  GDIKKRQPEEQFEMVQECNDVLFERITTNLDIKGGLRRNTQQVVEAQVDVMSSSTSIEPA 152

Query: 468 --NPSHNSSP----WNKPV-ISEKKMGSTIFIGAKNIPRPQLTFKDTIDNS-ENLWVPKI 623
             +P    +P    WN+     ++ M S     AKNI RPQ  F++ +DNS +N +VP++
Sbjct: 153 VASPQTQGTPKAGSWNRTTGTPQRSMVSARLFTAKNIVRPQTQFREPVDNSAQNPFVPRL 212

Query: 624 SDKPNNIKPLALNILYTEKGEAVGYEHPYQMELDMYNPP 740
            +KPN++KPLAL   Y + G    Y HPY+ EL  + PP
Sbjct: 213 KEKPNSLKPLALLPEYDDAGNVQSYLHPYEFELLKFQPP 251


>AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p protein.
          Length = 1674

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 55/211 (26%), Positives = 79/211 (37%), Gaps = 5/211 (2%)
 Frame = +3

Query: 156  GYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKC 335
            G  +  K  + S + P+S+ YD     P    I  +       +  E  G  +PA     
Sbjct: 867  GAYNQEKISEHSTRKPVSNGYDKVPESP-ITHIQIKKPSATQHKEQEQTGYPRPASPAGY 925

Query: 336  EDFTSNIEKLA--DVNDSLLDRINISIDTVSGENLPSEAFAS--GLNDNPSHNSSPWNKP 503
            E  T+     A   +N    D      D  S  +   +  A    LN N  H SSP  KP
Sbjct: 926  EQTTAAAPAPAAPSLNYDKPDAPPSQYDQPSAPSASYDQLAPMPSLNYNEQHASSPGRKP 985

Query: 504  VISEKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNN-IKPLALNILYTEK 680
              S  K  ST ++   + PRP  T     DN   L++    DK +  I+  A NI+ +  
Sbjct: 986  --STAKPISTSYVTGPSTPRPPATVDYHYDNVPPLFM--ADDKLDAFIQSTAENIVGSTP 1041

Query: 681  GEAVGYEHPYQMELDMYNPPVAVHRXRSGAS 773
            G    Y+ P    +   + P   HR  S  S
Sbjct: 1042 G---NYQPPL---VATASTPAYAHRPTSSGS 1066


>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
            protein.
          Length = 1629

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 55/211 (26%), Positives = 79/211 (37%), Gaps = 5/211 (2%)
 Frame = +3

Query: 156  GYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKC 335
            G  +  K  + S + P+S+ YD     P    I  +       +  E  G  +PA     
Sbjct: 822  GAYNQEKISEHSTRKPVSNGYDKVPESP-ITHIQIKKPSATQHKEQEQTGYPRPASPAGY 880

Query: 336  EDFTSNIEKLA--DVNDSLLDRINISIDTVSGENLPSEAFAS--GLNDNPSHNSSPWNKP 503
            E  T+     A   +N    D      D  S  +   +  A    LN N  H SSP  KP
Sbjct: 881  EQTTAAAPAPAAPSLNYDKPDAPPSQYDQPSAPSASYDQLAPMPSLNYNEQHASSPGRKP 940

Query: 504  VISEKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNN-IKPLALNILYTEK 680
              S  K  ST ++   + PRP  T     DN   L++    DK +  I+  A NI+ +  
Sbjct: 941  --STAKPISTSYVTGPSTPRPPATVDYHYDNVPPLFM--ADDKLDAFIQSTAENIVGSTP 996

Query: 681  GEAVGYEHPYQMELDMYNPPVAVHRXRSGAS 773
            G    Y+ P    +   + P   HR  S  S
Sbjct: 997  G---NYQPPL---VATASTPAYAHRPTSSGS 1021


>AE014298-1000|AAN09196.1|  319|Drosophila melanogaster CG14425-PA,
           isoform A protein.
          Length = 319

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = +3

Query: 417 VSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFI----GAKNIPRPQLTFKD 584
           +SG N P+   +SG   N S NS+P N    +    GS+ F     G+ N       F  
Sbjct: 142 ISGSNFPNNPTSSGNFTNNSTNSNPTNSGHFASNLAGSSNFTNHLSGSNNYTNSNGNFTS 201

Query: 585 TIDNSEN 605
              +S N
Sbjct: 202 NAASSSN 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,857,511
Number of Sequences: 53049
Number of extensions: 726748
Number of successful extensions: 2008
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2007
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)