Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_O03
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 33 0.19
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 33 0.19
U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 31 1.0
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 31 1.0
AF099919-7|AAC68795.1| 156|Caenorhabditis elegans Hypothetical ... 31 1.0
U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z93382-4|CAB07614.1| 202|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical ... 29 5.5
Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical pr... 28 9.6
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +3
Query: 150 QEGYRSVNKTIKSSNQLPMSSS---YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPA 320
++G + V TI + L M S D + T PE +I NV N + G+
Sbjct: 862 RDGSKVVKPTIPQNKVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLN-IKGSLVDQ 920
Query: 321 VKLKCEDFTSNIEKLADVNDSLLDRINISIDTVSGENLPS 440
+ E + +N+EKL +L+ N D + + LP+
Sbjct: 921 MTRMMEQYANNLEKLVAERTGMLEEANQRADRLLSQLLPA 960
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +3
Query: 150 QEGYRSVNKTIKSSNQLPMSSS---YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPA 320
++G + V TI + L M S D + T PE +I NV N + G+
Sbjct: 808 RDGSKVVKPTIPQNKVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLN-IKGSLVDQ 866
Query: 321 VKLKCEDFTSNIEKLADVNDSLLDRINISIDTVSGENLPS 440
+ E + +N+EKL +L+ N D + + LP+
Sbjct: 867 MTRMMEQYANNLEKLVAERTGMLEEANQRADRLLSQLLPA 906
>U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical protein
T19A5.1 protein.
Length = 1280
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 588 IDNSENLWVPKISDKPNNIKPLALNILYTEKGEAVGYEHPYQMELDMYNPPVAVHRXRSG 767
+D+ E W +++ P KPL+ + EK + Y+ EL P ++H+ R G
Sbjct: 972 VDSWEESWESDLAEIPG--KPLSY-LWIREKSMMIQYDAKLPSEL----PKPSIHQIRRG 1024
Query: 768 ASMFPP 785
S+FPP
Sbjct: 1025 VSLFPP 1030
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +3
Query: 171 NKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTS 350
+KT +++ MS + L K E + +Q +N+ NE+ + + K +D T
Sbjct: 291 SKTTVAADVAKMSGA--LQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITK 348
Query: 351 NIEKLADVNDSLLDRINISIDTVS 422
+EK A + D+I ID S
Sbjct: 349 ELEKSAKSLEETTDKIGSKIDNTS 372
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 180 IKSSNQLPMSSS-YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNI 356
++ SN LP + + Y+L+ +YP FN + Q + N++ T+ ++ D S++
Sbjct: 44 VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKV--TKSIGCAMRVPDVGSSV 101
Query: 357 E 359
E
Sbjct: 102 E 102
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 180 IKSSNQLPMSSS-YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNI 356
++ SN LP + + Y+L+ +YP FN + Q + N++ T+ ++ D S++
Sbjct: 44 VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKV--TKSIGCAMRVPDVGSSV 101
Query: 357 E 359
E
Sbjct: 102 E 102
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 180 IKSSNQLPMSSS-YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNI 356
++ SN LP + + Y+L+ +YP FN + Q + N++ T+ ++ D S++
Sbjct: 44 VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKV--TKSIGCAMRVPDVGSSV 101
Query: 357 E 359
E
Sbjct: 102 E 102
>AF099919-7|AAC68795.1| 156|Caenorhabditis elegans Hypothetical
protein F40G9.6 protein.
Length = 156
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 VAQQSNELIGTEQPAVKLKCEDFTSNIEK-LADVNDSLLDRINISIDTV 419
V Q+ N+L GT+ A+K E+ N+EK + + DS + + D V
Sbjct: 24 VLQEQNQLFGTKLSALKTAIEEIHENVEKIMGNFTDSEKSDVGKTFDNV 72
>U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical
protein F46H5.8 protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 303 GTEQPAVKLKCEDFTSNIEKLADVNDSLLDR 395
G + ++ LKCE+ N+ KL D+N+ ++R
Sbjct: 197 GIKNLSIGLKCENSNENVAKLTDLNNEEIER 227
>Z93382-4|CAB07614.1| 202|Caenorhabditis elegans Hypothetical
protein F45G2.5 protein.
Length = 202
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 607 CGCPKFQTNQTTSSLWL*TFCIPRRAKLLDMSIHTKWS---WTCITLRSQFIDXDPEPPC 777
C C K TN+ W C+ R + + +I K + W C+ + P C
Sbjct: 18 CFCEKCLTNEECDLKWPDAICVRGRCRCSENTIRKKSASREWVCLATNDATGNSGPPLTC 77
Query: 778 FPPSG 792
P G
Sbjct: 78 PTPEG 82
>Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical
protein F10D11.4 protein.
Length = 168
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/89 (28%), Positives = 42/89 (47%)
Frame = +3
Query: 498 KPVISEKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYTE 677
K IS KK S I + +K R + KD + + K DKP+N +PL N+ +
Sbjct: 65 KKPISHKKKKSLIKVLSKKKERSKKKEKDKKPDEKVEKEVKKEDKPDNNEPLIKNLKIAK 124
Query: 678 KGEAVGYEHPYQMELDMYNPPVAVHRXRS 764
K + E+P + +L+ ++ V + S
Sbjct: 125 KEQE--EENP-KTDLESHDDEVETKKKES 150
>AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical
protein R52.3 protein.
Length = 379
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 513 EKKMGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALN 662
+ MGS+ FI ++ + +T D ID + + + I+D+P +K AL+
Sbjct: 177 DSSMGSSTFISWIDMEKEYVTNDDCIDVTIHAKIISITDEPCEMKTFALS 226
>Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical
protein R08H2.9 protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 198 LPMSSSYDLFKTYPEFNEISNQISQNVA-QQSNELI 302
LP S Y FK + +SN+I QNVA Q N L+
Sbjct: 18 LPSFSEYAKFKATYHLHPLSNKIDQNVAVVQGNGLL 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,839,042
Number of Sequences: 27780
Number of extensions: 371000
Number of successful extensions: 1026
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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