Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_O03
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   4.7  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   4.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   4.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   4.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   8.2  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 637 FGLSEILGTHKFSELSIVSLKVSCGRGMFLAPMN 536
           FG  + LG    +   IVS +V CGR +   P N
Sbjct: 87  FGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFN 120


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 684 EAVGYEHPYQMELDMYNP 737
           E +G  H Y  +L  YNP
Sbjct: 50  EGLGRRHRYNFQLKPYNP 67


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 684 EAVGYEHPYQMELDMYNP 737
           E +G  H Y  +L  YNP
Sbjct: 51  EGLGRRHRYNFQLKPYNP 68


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 637 FGLSEILGTHKFSELSIVSLKVSCGRGMFLAPMN 536
           FG  + LG    +   IVS +V CGR +   P N
Sbjct: 103 FGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFN 136


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 165 SVNKTIKSSNQLPMSSSYD 221
           S N+ IKS  + P SSS D
Sbjct: 93  SDNENIKSQKEFPNSSSSD 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,894
Number of Sequences: 438
Number of extensions: 4300
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)